bionlp-st-ge-2016-test-ihmc  

PMC:3312845 / 20964-23695 JSONTXT 23 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T9306 0-5 Protein denotes NF-κB
T9342 0-21 Phosphorylation denotes NF-κB phosphorylation
T9303 50-55 Protein denotes TNF-α
T9339 91-115 Phosphorylation denotes phosphorylation of NF-κB
T9331 107-115 Protein denotes of NF-κB
T9312 128-142 Protein denotes TNF-α-mediated
T9305 128-166 Entity denotes TNF-α-mediated signaling following SE,
T9335 215-244 Entity denotes five phospho-NF-κB antibodies
T9300 228-233 Protein denotes NF-κB
T9322 302-304 Protein denotes SE
T9333 316-326 Entity denotes the saline
T9301 348-358 Entity denotes p65-Ser276
T9292 348-358 Protein denotes p65-Ser276
T9315 360-370 Protein denotes p65-Ser311
T9308 360-370 Entity denotes p65-Ser311
T9320 372-382 Entity denotes p65-Ser529
T9295 372-382 Protein denotes p65-Ser529
T9327 388-398 Protein denotes p65-Ser536
T9314 388-398 Entity denotes p65-Ser536
T9340 388-414 Phosphorylation denotes p65-Ser536 phosphorylation
T9325 418-428 Entity denotes astrocytes
T9330 434-451 Entity denotes endothelial cells
T9334 454-471 Entity denotes sTNFp55R infusion
T9302 455-458 Protein denotes TNF
T9309 492-502 Entity denotes p65-Ser276
T9299 492-502 Protein denotes p65-Ser276
T9307 507-517 Protein denotes p65-Ser311
T9296 507-517 Entity denotes p65-Ser311
T9338 507-533 Phosphorylation denotes p65-Ser311 phosphorylation
T9326 535-536 Entity denotes p
T9332 586-596 Protein denotes p65-Ser529
T9311 586-596 Entity denotes p65-Ser529
T9323 600-610 Entity denotes p65-Ser536
T9313 600-610 Protein denotes p65-Ser536
T9341 600-626 Phosphorylation denotes p65-Ser536 phosphorylation
T9336 647-721 Positive_regulation denotes In contrast, p65-Thr435 phosphorylation was increased in endothelial cells
T9321 660-670 Entity denotes p65-Thr435
T9298 660-670 Protein denotes p65-Thr435
T9337 660-686 Phosphorylation denotes p65-Thr435 phosphorylation
T9293 704-721 Entity denotes endothelial cells
T9324 727-737 Entity denotes astrocytes
T9297 746-778 Protein denotes the PC of saline-infused animals
T9317 791-805 Protein denotes SE (Figure 5A)
T9329 821-824 Protein denotes TNF
T9316 821-837 Entity denotes TNFp55R infusion
T9294 861-871 Entity denotes SE-induced
T9318 861-882 Entity denotes SE-induced p65-Thr435
T9291 861-882 Protein denotes SE-induced p65-Thr435
T9319 902-920 Entity denotes endothelial cells,
T9328 930-939 Entity denotes to saline
T9304 940-948 Entity denotes infusion
T9310 950-951 Entity denotes p
T15416 989-1009 Entity denotes of sTNFp55R infusion
T15417 993-996 Protein denotes TNF
T15434 1010-1048 Phosphorylation denotes on NF-κB phosphorylation in astrocytes
T15423 1013-1018 Protein denotes NF-κB
T15424 1038-1048 Entity denotes astrocytes
T15430 1061-1063 Entity denotes SE
T15413 1079-1081 Protein denotes SE
T15431 1135-1145 Entity denotes astrocytes
T15411 1151-1161 Entity denotes p65-Ser276
T15402 1151-1161 Protein denotes p65-Ser276
T15404 1167-1181 Entity denotes p65-Ser311 (C)
T15401 1167-1181 Protein denotes p65-Ser311 (C)
T15419 1183-1197 Entity denotes p65-Ser529 (E)
T15406 1183-1197 Protein denotes p65-Ser529 (E)
T15426 1203-1217 Entity denotes p65-Ser536 (G)
T15421 1203-1217 Protein denotes p65-Ser536 (G)
T15435 1203-1233 Phosphorylation denotes p65-Ser536 (G) phosphorylation
T15420 1244-1252 Protein denotes sTNFp55R
T15415 1244-1252 Entity denotes sTNFp55R
T15425 1253-1277 Entity denotes infusion (B, D, F and H)
T15407 1275-1276 Entity denotes H
T15428 1298-1312 Protein denotes p65-Ser276 (B)
T15418 1298-1312 Entity denotes p65-Ser276 (B)
T15427 1302-1308 Entity denotes Ser276
T15410 1317-1331 Entity denotes p65-Ser311 (D)
T15408 1317-1331 Protein denotes p65-Ser311 (D)
T15409 1321-1327 Entity denotes Ser311
T15422 1374-1388 Entity denotes p65-Ser529 (F)
T15403 1374-1388 Protein denotes p65-Ser529 (F)
T15429 1386-1387 Entity denotes F
T15432 1393-1407 Entity denotes p65-Ser536 (H)
T15414 1393-1407 Protein denotes p65-Ser536 (H)
T15433 1393-1423 Phosphorylation denotes p65-Ser536 (H) phosphorylation
T15412 1405-1406 Entity denotes H
T15405 1434-1447 Protein denotes Bar = 12.5 μm
T15685 1495-1515 Entity denotes of sTNFp55R infusion
T15680 1499-1502 Protein denotes TNF
T15682 1519-1524 Protein denotes NF-κB
T15693 1519-1540 Phosphorylation denotes NF-κB phosphorylation
T15694 1590-1644 Phosphorylation denotes of NF-κB phosphorylation 12 hr after SE (mean ± S.E.M)
T15689 1593-1598 Protein denotes NF-κB
T15684 1627-1644 Entity denotes SE (mean ± S.E.M)
T15686 1675-1681 Entity denotes saline
T15690 1714-1771 Protein denotes Quantitative analysis of SMI-71 expression 1 day after SE
T15687 1817-1823 Entity denotes saline
T15683 1891-1901 Entity denotes p65-Thr435
T15681 1891-1901 Protein denotes p65-Thr435
T15692 1891-1917 Phosphorylation denotes p65-Thr435 phosphorylation
T15688 1932-1951 Protein denotes the PC following SE
T15691 1949-1951 Entity denotes SE
T16211 1963-2041 Protein denotes Effect of sTNFp55R infusion on p65-Thr435 phosphorylation in endothelial cells
T16204 1963-2041 Entity denotes Effect of sTNFp55R infusion on p65-Thr435 phosphorylation in endothelial cells
T16198 1963-2041 Protein denotes Effect of sTNFp55R infusion on p65-Thr435 phosphorylation in endothelial cells
T16208 1998-2004 Entity denotes Thr435
T16181 2024-2041 Entity denotes endothelial cells
T16178 2052-2054 Protein denotes SE
T16218 2073-2102 Phosphorylation denotes of p65-Thr435 phosphorylation
T16189 2076-2086 Protein denotes p65-Thr435
T16182 2076-2086 Entity denotes p65-Thr435
T16193 2103-2123 Entity denotes by sTNFp55R infusion
T16200 2107-2110 Protein denotes TNF
T16191 2136-2138 Entity denotes SE
T16212 2140-2150 Entity denotes p65-Thr435
T16197 2140-2150 Protein denotes p65-Thr435
T16217 2140-2208 Phosphorylation denotes p65-Thr435 phosphorylation is rarely observed in astrocytes (arrows)
T16180 2189-2208 Entity denotes astrocytes (arrows)
T16215 2214-2270 Phosphorylation denotes Endothelial p65-Thr435 phosphorylation in non-SE animals
T16206 2214-2270 Protein denotes Endothelial p65-Thr435 phosphorylation in non-SE animals
T16207 2230-2236 Entity denotes Thr435
T16205 2273-2276 Entity denotes D-E
T16219 2278-2357 Phosphorylation denotes Endothelial p65-Thr435 phosphorylation in saline-infused animals 1 day after SE
T16202 2290-2300 Protein denotes p65-Thr435
T16184 2290-2300 Entity denotes p65-Thr435
T16183 2320-2357 Protein denotes saline-infused animals 1 day after SE
T16199 2359-2369 Protein denotes p65-Thr435
T16196 2359-2369 Entity denotes p65-Thr435
T16216 2359-2385 Phosphorylation denotes p65-Thr435 phosphorylation
T16213 2359-2397 Positive_regulation denotes p65-Thr435 phosphorylation is enhanced
T16220 2399-2479 Negative_regulation denotes while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows)
T16190 2437-2443 Protein denotes GLUT-1
T16210 2444-2470 Entity denotes positive endothelial cells
T16214 2487-2567 Phosphorylation denotes Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE
T16201 2499-2509 Entity denotes p65-Thr435
T16194 2499-2509 Protein denotes p65-Thr435
T16195 2529-2567 Entity denotes sTNFp55R-infused animal 1 day after SE
T16188 2570-2577 Protein denotes TNFp55R
T16185 2570-2577 Entity denotes TNFp55R
T16192 2578-2586 Entity denotes infusion
T16209 2607-2617 Protein denotes p65-Thr435
T16179 2607-2617 Entity denotes p65-Thr435
T16186 2653-2659 Protein denotes GLUT-1
T16203 2660-2686 Entity denotes positive endothelial cells
T16187 2723-2726 Entity denotes E-G
R11906 T15414 T15433 themeOf p65-Ser536 (H),p65-Ser536 (H) phosphorylation
R11907 T15421 T15435 themeOf p65-Ser536 (G),p65-Ser536 (G) phosphorylation
R11908 T15423 T15434 themeOf NF-κB,on NF-κB phosphorylation in astrocytes
R11909 T15426 T15421 partOf p65-Ser536 (G),p65-Ser536 (G)
R11910 T15426 T15435 siteOf p65-Ser536 (G),p65-Ser536 (G) phosphorylation
R11911 T15432 T15414 partOf p65-Ser536 (H),p65-Ser536 (H)
R11912 T15432 T15433 siteOf p65-Ser536 (H),p65-Ser536 (H) phosphorylation
R12099 T15681 T15692 themeOf p65-Thr435,p65-Thr435 phosphorylation
R12100 T15682 T15693 themeOf NF-κB,NF-κB phosphorylation
R12101 T15683 T15681 partOf p65-Thr435,p65-Thr435
R12102 T15683 T15692 siteOf p65-Thr435,p65-Thr435 phosphorylation
R12103 T15689 T15694 themeOf NF-κB,of NF-κB phosphorylation 12 hr after SE (mean ± S.E.M)
R12364 T16182 T16189 partOf p65-Thr435,p65-Thr435
R12365 T16182 T16218 siteOf p65-Thr435,of p65-Thr435 phosphorylation
R12366 T16184 T16202 partOf p65-Thr435,p65-Thr435
R12367 T16184 T16219 siteOf p65-Thr435,Endothelial p65-Thr435 phosphorylation in saline-infused animals 1 day after SE
R12368 T16189 T16218 themeOf p65-Thr435,of p65-Thr435 phosphorylation
R12369 T16194 T16214 themeOf p65-Thr435,Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE
R12370 T16196 T16199 partOf p65-Thr435,p65-Thr435
R12371 T16196 T16216 siteOf p65-Thr435,p65-Thr435 phosphorylation
R12372 T16197 T16217 themeOf p65-Thr435,p65-Thr435 phosphorylation is rarely observed in astrocytes (arrows)
R12373 T16199 T16216 themeOf p65-Thr435,p65-Thr435 phosphorylation
R12374 T16201 T16194 partOf p65-Thr435,p65-Thr435
R12375 T16201 T16214 siteOf p65-Thr435,Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE
R12376 T16202 T16219 themeOf p65-Thr435,Endothelial p65-Thr435 phosphorylation in saline-infused animals 1 day after SE
R12377 T16206 T16215 themeOf Endothelial p65-Thr435 phosphorylation in non-SE animals,Endothelial p65-Thr435 phosphorylation in non-SE animals
R12378 T16207 T16206 partOf Thr435,Endothelial p65-Thr435 phosphorylation in non-SE animals
R12379 T16207 T16215 siteOf Thr435,Endothelial p65-Thr435 phosphorylation in non-SE animals
R12380 T16212 T16197 partOf p65-Thr435,p65-Thr435
R12381 T16212 T16217 siteOf p65-Thr435,p65-Thr435 phosphorylation is rarely observed in astrocytes (arrows)
R12382 T16216 T16213 themeOf p65-Thr435 phosphorylation,p65-Thr435 phosphorylation is enhanced
R7597 T9296 T9307 partOf p65-Ser311,p65-Ser311
R7598 T9296 T9338 siteOf p65-Ser311,p65-Ser311 phosphorylation
R7599 T9298 T9337 themeOf p65-Thr435,p65-Thr435 phosphorylation
R7600 T9306 T9342 themeOf NF-κB,NF-κB phosphorylation
R7601 T9307 T9338 themeOf p65-Ser311,p65-Ser311 phosphorylation
R7602 T9313 T9341 themeOf p65-Ser536,p65-Ser536 phosphorylation
R7603 T9314 T9327 partOf p65-Ser536,p65-Ser536
R7604 T9314 T9340 siteOf p65-Ser536,p65-Ser536 phosphorylation
R7605 T9321 T9298 partOf p65-Thr435,p65-Thr435
R7606 T9321 T9337 siteOf p65-Thr435,p65-Thr435 phosphorylation
R7607 T9323 T9313 partOf p65-Ser536,p65-Ser536
R7608 T9323 T9341 siteOf p65-Ser536,p65-Ser536 phosphorylation
R7609 T9327 T9340 themeOf p65-Ser536,p65-Ser536 phosphorylation
R7610 T9331 T9339 themeOf of NF-κB,phosphorylation of NF-κB
R7611 T9337 T9336 themeOf p65-Thr435 phosphorylation,"In contrast, p65-Thr435 phosphorylation was increased in endothelial cells"