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PMC:3279418 / 6052-7229 JSONTXT 15 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T12771 44-46 IN denotes In
T12772 47-51 NN denotes vivo
T12773 52-55 CC denotes and
T12774 56-58 IN denotes in
T12775 59-64 NN denotes vitro
T12776 65-73 NNS denotes features
T12777 74-76 IN denotes of
T12778 77-84 NNP denotes SHARPIN
T12779 84-85 . denotes .
T12780 86-87 -LRB- denotes (
T12781 87-88 NNP denotes A
T12782 88-89 -RRB- denotes )
T12783 90-95 NNP denotes COILS
T12784 96-99 CC denotes and
T12785 100-109 NNP denotes MotifScan
T12786 110-118 NNS denotes programs
T12787 119-123 VBD denotes were
T12788 124-128 VBN denotes used
T12789 129-131 TO denotes to
T12790 132-139 VB denotes predict
T12791 140-143 DT denotes the
T12792 144-152 NN denotes presence
T12793 153-155 IN denotes of
T12794 156-158 NNP denotes CC
T12795 159-160 -LRB- denotes (
T12796 160-171 NN denotes coiled-coil
T12797 171-172 -RRB- denotes )
T12798 173-179 NN denotes domain
T12799 179-180 , denotes ,
T12800 181-184 NNP denotes UBL
T12801 185-186 -LRB- denotes (
T12802 186-200 JJ denotes ubiquitin-like
T12803 200-201 -RRB- denotes )
T12804 202-208 NN denotes domain
T12805 209-212 CC denotes and
T12806 213-218 NNP denotes ZFRBP
T12807 219-220 -LRB- denotes (
T12808 220-231 NN denotes zinc-finger
T12809 232-243 NNP denotes Ran-Binding
T12810 244-251 NN denotes protein
T12811 252-253 CD denotes 2
T12812 253-254 -RRB- denotes )
T12813 255-261 NN denotes domain
T12814 262-267 WDT denotes which
T12815 268-272 VBP denotes form
T12816 273-280 JJ denotes similar
T12817 281-286 NN denotes motif
T12818 287-295 NNS denotes patterns
T12819 296-298 IN denotes in
T12820 299-302 DT denotes the
T12821 303-310 NNP denotes SHARPIN
T12822 311-318 NN denotes protein
T12823 319-321 IN denotes of
T12824 322-327 JJ denotes human
T12825 327-328 , denotes ,
T12826 329-334 NN denotes mouse
T12827 335-338 CC denotes and
T12828 339-342 NN denotes rat
T12829 343-350 NNS denotes origins
T12830 350-351 . denotes .
T12831 352-353 -LRB- denotes (
T12832 353-354 NNP denotes B
T12833 354-355 -RRB- denotes )
T12834 356-361 CD denotes Eight
T12835 362-370 JJ denotes week-old
T12836 371-378 NNS denotes females
T12837 379-381 IN denotes of
T12838 382-384 NNP denotes WT
T12839 385-388 CC denotes and
T12840 389-393 NN denotes cpdm
T12841 394-398 NNS denotes mice
T12842 398-399 . denotes .
T12843 400-403 DT denotes The
T12844 404-410 JJ denotes mutant
T12845 411-415 NNS denotes mice
T12846 416-417 -LRB- denotes (
T12847 417-422 IN denotes above
T12848 422-423 -RRB- denotes )
T12849 424-431 VB denotes develop
T12850 432-443 JJ denotes progressive
T12851 444-448 NN denotes skin
T12852 449-461 NN denotes inflammation
T12853 462-470 VBG denotes starting
T12854 471-473 IN denotes at
T12855 474-479 IN denotes about
T12856 480-484 CD denotes four
T12857 485-490 NNS denotes weeks
T12858 490-491 . denotes .
T12859 492-493 -LRB- denotes (
T12860 493-494 $ denotes C
T12861 494-495 -RRB- denotes )
T12862 496-510 JJ denotes Extramedullary
T12863 511-524 NN denotes hematopoiesis
T12864 525-531 VBZ denotes causes
T12865 532-538 JJ denotes marked
T12866 539-550 NN denotes enlargement
T12867 551-553 IN denotes of
T12868 554-557 DT denotes the
T12869 558-564 NN denotes spleen
T12870 565-567 IN denotes of
T12871 568-572 NN denotes cpdm
T12872 573-577 NNS denotes mice
T12873 577-578 . denotes .
T12874 579-580 -LRB- denotes (
T12875 580-581 NNP denotes D
T12876 581-582 -RRB- denotes )
T12877 583-587 NNP denotes BMDC
T12878 588-592 VBD denotes were
T12879 593-602 VBN denotes incubated
T12880 603-605 IN denotes in
T12881 606-609 DT denotes the
T12882 610-617 NN denotes absence
T12883 618-620 CC denotes or
T12884 621-629 NN denotes presence
T12885 630-632 IN denotes of
T12886 633-636 CD denotes 100
T12887 637-642 JJ denotes ng/ml
T12888 643-646 NNP denotes LPS
T12889 647-650 IN denotes for
T12890 651-652 CD denotes 4
T12891 653-658 NNS denotes hours
T12892 658-659 . denotes .
T12893 660-663 DT denotes The
T12894 664-668 NNP denotes mRNA
T12895 669-674 NN denotes level
T12896 675-677 IN denotes of
T12897 678-685 NNP denotes Sharpin
T12898 686-689 VBD denotes was
T12899 690-698 VBN denotes measured
T12900 699-701 IN denotes by
T12901 702-709 NNP denotes qRT-PCR
T12902 710-713 CC denotes and
T12903 714-723 VBN denotes presented
T12904 724-732 JJ denotes relative
T12905 733-735 TO denotes to
T12906 736-739 DT denotes the
T12907 740-744 NNP denotes mRNA
T12908 745-755 NN denotes expression
T12909 756-758 IN denotes in
T12910 759-773 JJ denotes non-stimulated
T12911 774-776 NNP denotes WT
T12912 777-781 NNP denotes BMDC
T12913 781-782 . denotes .
T12914 783-787 NNS denotes Bars
T12915 788-797 VBP denotes represent
T12916 798-801 DT denotes the
T12917 802-806 JJ denotes mean
T12918 807-808 NN denotes ±
T12919 809-813 NN denotes s.d.
T12920 814-816 IN denotes of
T12921 817-818 CD denotes 3
T12922 819-823 NNS denotes mice
T12923 823-824 . denotes .
T12924 825-826 SYM denotes *
T12925 827-828 NN denotes P
T12926 828-829 NN denotes <
T12927 829-833 CD denotes 0.05
T12928 833-834 : denotes ;
T12929 835-837 SYM denotes **
T12930 838-839 FW denotes P
T12931 839-840 FW denotes <
T12932 840-845 CD denotes 0.001
T12933 845-846 . denotes .
T12934 847-848 -LRB- denotes (
T12935 848-849 NNP denotes E
T12936 849-850 -RRB- denotes )
T12937 851-861 NNP denotes Fibroblast
T12938 862-863 -LRB- denotes (
T12939 863-869 NNP denotes NIH3T3
T12940 869-870 -RRB- denotes )
T12941 871-874 CC denotes and
T12942 875-886 NNS denotes macrophages
T12943 887-888 -LRB- denotes (
T12944 888-894 CD denotes RAW264
T12945 894-896 CD denotes .7
T12946 896-897 -RRB- denotes )
T12947 898-903 NNS denotes cells
T12948 904-908 VBD denotes were
T12949 909-920 VBN denotes transfected
T12950 921-925 IN denotes with
T12951 926-929 DT denotes the
T12952 930-940 NN denotes expression
T12953 941-948 VBD denotes plasmid
T12954 949-962 NNP denotes pFLAG-SHARPIN
T12955 962-963 . denotes .
T12956 964-969 IN denotes After
T12957 970-972 CD denotes 48
T12958 973-978 NNS denotes hours
T12959 978-979 , denotes ,
T12960 980-985 NNS denotes cells
T12961 986-990 VBD denotes were
T12962 991-996 VBN denotes fixed
T12963 997-1000 CC denotes and
T12964 1001-1007 VBN denotes probed
T12965 1008-1012 IN denotes with
T12966 1013-1022 JJ denotes anti-FLAG
T12967 1023-1026 CC denotes and
T12968 1027-1042 JJ denotes FITC-conjugated
T12969 1043-1052 JJ denotes secondary
T12970 1053-1061 NN denotes antibody
T12971 1061-1062 . denotes .
T12972 1063-1069 NNP denotes Nuclei
T12973 1070-1074 VBD denotes were
T12974 1075-1082 VBN denotes stained
T12975 1083-1087 IN denotes with
T12976 1088-1092 NNP denotes DAPI
T12977 1092-1093 . denotes .
T12978 1094-1096 IN denotes In
T12979 1097-1101 DT denotes both
T12980 1102-1113 VBN denotes transfected
T12981 1114-1118 NN denotes cell
T12982 1119-1124 NNS denotes lines
T12983 1124-1125 , denotes ,
T12984 1126-1138 NNP denotes FLAG-SHARPIN
T12985 1139-1142 VBD denotes was
T12986 1143-1148 VBN denotes found
T12987 1149-1151 TO denotes to
T12988 1152-1154 VB denotes be
T12989 1155-1174 JJ denotes cytoplasm-localized
T12990 1174-1175 . denotes .
R10558 T12771 T12771 ROOT In,In
R10559 T12772 T12771 pobj vivo,In
R10560 T12773 T12771 cc and,In
R10561 T12774 T12771 conj in,In
R10562 T12775 T12776 amod vitro,features
R10563 T12776 T12774 pobj features,in
R10564 T12777 T12776 prep of,features
R10565 T12778 T12777 pobj SHARPIN,of
R10566 T12779 T12771 punct .,In
R10567 T12780 T12788 punct (,used
R10568 T12781 T12786 nmod A,programs
R10569 T12782 T12781 punct ),A
R10570 T12783 T12786 nmod COILS,programs
R10571 T12784 T12783 cc and,COILS
R10572 T12785 T12783 conj MotifScan,COILS
R10573 T12786 T12788 nsubjpass programs,used
R10574 T12787 T12788 auxpass were,used
R10575 T12788 T12788 ROOT used,used
R10576 T12789 T12790 aux to,predict
R10577 T12790 T12788 xcomp predict,used
R10578 T12791 T12792 det the,presence
R10579 T12792 T12790 dobj presence,predict
R10580 T12793 T12792 prep of,presence
R10581 T12794 T12793 pobj CC,of
R10582 T12795 T12794 punct (,CC
R10583 T12796 T12798 nmod coiled-coil,domain
R10584 T12797 T12798 punct ),domain
R10585 T12798 T12794 appos domain,CC
R10586 T12799 T12794 punct ",",CC
R10587 T12800 T12794 conj UBL,CC
R10588 T12801 T12802 punct (,ubiquitin-like
R10589 T12802 T12800 appos ubiquitin-like,UBL
R10590 T12803 T12802 punct ),ubiquitin-like
R10591 T12804 T12793 pobj domain,of
R10592 T12805 T12804 cc and,domain
R10593 T12806 T12813 compound ZFRBP,domain
R10594 T12807 T12810 punct (,protein
R10595 T12808 T12809 compound zinc-finger,Ran-Binding
R10596 T12809 T12810 compound Ran-Binding,protein
R10597 T12810 T12806 appos protein,ZFRBP
R10598 T12811 T12810 nummod 2,protein
R10599 T12812 T12810 punct ),protein
R10600 T12813 T12792 appos domain,presence
R10601 T12814 T12815 nsubj which,form
R10602 T12815 T12813 relcl form,domain
R10603 T12816 T12818 amod similar,patterns
R10604 T12817 T12818 compound motif,patterns
R10605 T12818 T12815 dobj patterns,form
R10606 T12819 T12818 prep in,patterns
R10607 T12820 T12822 det the,protein
R10608 T12821 T12822 compound SHARPIN,protein
R10609 T12822 T12819 pobj protein,in
R10610 T12823 T12822 prep of,protein
R10611 T12824 T12826 amod human,mouse
R10612 T12825 T12824 punct ",",human
R10613 T12826 T12823 pobj mouse,of
R10614 T12827 T12826 cc and,mouse
R10615 T12828 T12829 compound rat,origins
R10616 T12829 T12826 conj origins,mouse
R10617 T12830 T12788 punct .,used
R10618 T12831 T12832 punct (,B
R10619 T12832 T12832 ROOT B,B
R10620 T12833 T12832 punct ),B
R10621 T12834 T12836 nummod Eight,females
R10622 T12835 T12836 amod week-old,females
R10623 T12836 T12836 ROOT females,females
R10624 T12837 T12836 prep of,females
R10625 T12838 T12841 nmod WT,mice
R10626 T12839 T12838 cc and,WT
R10627 T12840 T12841 compound cpdm,mice
R10628 T12841 T12837 pobj mice,of
R10629 T12842 T12836 punct .,females
R10630 T12843 T12845 det The,mice
R10631 T12844 T12845 amod mutant,mice
R10632 T12845 T12849 nsubj mice,develop
R10633 T12846 T12847 punct (,above
R10634 T12847 T12845 advmod above,mice
R10635 T12848 T12847 punct ),above
R10636 T12849 T12849 ROOT develop,develop
R10637 T12850 T12852 amod progressive,inflammation
R10638 T12851 T12852 compound skin,inflammation
R10639 T12852 T12849 dobj inflammation,develop
R10640 T12853 T12849 advcl starting,develop
R10641 T12854 T12853 prep at,starting
R10642 T12855 T12856 advmod about,four
R10643 T12856 T12857 nummod four,weeks
R10644 T12857 T12854 pobj weeks,at
R10645 T12858 T12849 punct .,develop
R10646 T12859 T12860 punct (,C
R10647 T12860 T12860 ROOT C,C
R10648 T12861 T12860 punct ),C
R10649 T12862 T12863 amod Extramedullary,hematopoiesis
R10650 T12863 T12864 nsubj hematopoiesis,causes
R10651 T12864 T12864 ROOT causes,causes
R10652 T12865 T12866 amod marked,enlargement
R10653 T12866 T12864 dobj enlargement,causes
R10654 T12867 T12866 prep of,enlargement
R10655 T12868 T12869 det the,spleen
R10656 T12869 T12867 pobj spleen,of
R10657 T12870 T12869 prep of,spleen
R10658 T12871 T12872 compound cpdm,mice
R10659 T12872 T12870 pobj mice,of
R10660 T12873 T12864 punct .,causes
R10661 T12874 T12877 punct (,BMDC
R10662 T12875 T12877 nmod D,BMDC
R10663 T12876 T12877 punct ),BMDC
R10664 T12877 T12879 nsubjpass BMDC,incubated
R10665 T12878 T12879 auxpass were,incubated
R10666 T12879 T12879 ROOT incubated,incubated
R10667 T12880 T12879 prep in,incubated
R10668 T12881 T12882 det the,absence
R10669 T12882 T12880 pobj absence,in
R10670 T12883 T12882 cc or,absence
R10671 T12884 T12882 conj presence,absence
R10672 T12885 T12882 prep of,absence
R10673 T12886 T12888 nummod 100,LPS
R10674 T12887 T12888 compound ng/ml,LPS
R10675 T12888 T12885 pobj LPS,of
R10676 T12889 T12879 prep for,incubated
R10677 T12890 T12891 nummod 4,hours
R10678 T12891 T12889 pobj hours,for
R10679 T12892 T12879 punct .,incubated
R10680 T12893 T12895 det The,level
R10681 T12894 T12895 compound mRNA,level
R10682 T12895 T12899 nsubjpass level,measured
R10683 T12896 T12895 prep of,level
R10684 T12897 T12896 pobj Sharpin,of
R10685 T12898 T12899 auxpass was,measured
R10686 T12899 T12899 ROOT measured,measured
R10687 T12900 T12899 agent by,measured
R10688 T12901 T12900 pobj qRT-PCR,by
R10689 T12902 T12899 cc and,measured
R10690 T12903 T12899 conj presented,measured
R10691 T12904 T12903 advmod relative,presented
R10692 T12905 T12904 prep to,relative
R10693 T12906 T12908 det the,expression
R10694 T12907 T12908 compound mRNA,expression
R10695 T12908 T12905 pobj expression,to
R10696 T12909 T12908 prep in,expression
R10697 T12910 T12912 compound non-stimulated,BMDC
R10698 T12911 T12912 compound WT,BMDC
R10699 T12912 T12909 pobj BMDC,in
R10700 T12913 T12899 punct .,measured
R10701 T12914 T12915 nsubj Bars,represent
R10702 T12915 T12915 ROOT represent,represent
R10703 T12916 T12919 det the,s.d.
R10704 T12917 T12919 amod mean,s.d.
R10705 T12918 T12919 compound ±,s.d.
R10706 T12919 T12915 dobj s.d.,represent
R10707 T12920 T12919 prep of,s.d.
R10708 T12921 T12922 nummod 3,mice
R10709 T12922 T12920 pobj mice,of
R10710 T12923 T12915 punct .,represent
R10711 T12924 T12930 punct *,P
R10712 T12925 T12927 compound P,0.05
R10713 T12926 T12927 compound <,0.05
R10714 T12927 T12924 npadvmod 0.05,*
R10715 T12928 T12930 punct ;,P
R10716 T12929 T12930 punct **,P
R10717 T12930 T12930 ROOT P,P
R10718 T12931 T12930 prep <,P
R10719 T12932 T12931 pobj 0.001,<
R10720 T12933 T12930 punct .,P
R10721 T12934 T12937 punct (,Fibroblast
R10722 T12935 T12937 nmod E,Fibroblast
R10723 T12936 T12937 punct ),Fibroblast
R10724 T12937 T12947 nmod Fibroblast,cells
R10725 T12938 T12939 punct (,NIH3T3
R10726 T12939 T12937 appos NIH3T3,Fibroblast
R10727 T12940 T12939 punct ),NIH3T3
R10728 T12941 T12937 cc and,Fibroblast
R10729 T12942 T12937 conj macrophages,Fibroblast
R10730 T12943 T12942 punct (,macrophages
R10731 T12944 T12945 nummod RAW264,.7
R10732 T12945 T12942 appos .7,macrophages
R10733 T12946 T12942 punct ),macrophages
R10734 T12947 T12949 nsubjpass cells,transfected
R10735 T12948 T12949 auxpass were,transfected
R10736 T12949 T12949 ROOT transfected,transfected
R10737 T12950 T12949 prep with,transfected
R10738 T12951 T12952 det the,expression
R10739 T12952 T12950 pobj expression,with
R10740 T12953 T12949 conj plasmid,transfected
R10741 T12954 T12953 nsubj pFLAG-SHARPIN,plasmid
R10742 T12955 T12949 punct .,transfected
R10743 T12956 T12962 prep After,fixed
R10744 T12957 T12958 nummod 48,hours
R10745 T12958 T12956 pobj hours,After
R10746 T12959 T12962 punct ",",fixed
R10747 T12960 T12962 nsubjpass cells,fixed
R10748 T12961 T12962 auxpass were,fixed
R10749 T12962 T12962 ROOT fixed,fixed
R10750 T12963 T12962 cc and,fixed
R10751 T12964 T12962 conj probed,fixed
R10752 T12965 T12964 prep with,probed
R10753 T12966 T12970 amod anti-FLAG,antibody
R10754 T12967 T12966 cc and,anti-FLAG
R10755 T12968 T12966 conj FITC-conjugated,anti-FLAG
R10756 T12969 T12970 amod secondary,antibody
R10757 T12970 T12965 pobj antibody,with
R10758 T12971 T12962 punct .,fixed
R10759 T12972 T12974 nsubjpass Nuclei,stained
R10760 T12973 T12974 auxpass were,stained
R10761 T12974 T12974 ROOT stained,stained
R10762 T12975 T12974 prep with,stained
R10763 T12976 T12975 pobj DAPI,with
R10764 T12977 T12974 punct .,stained
R10765 T12978 T12986 prep In,found
R10766 T12979 T12982 det both,lines
R10767 T12980 T12982 amod transfected,lines
R10768 T12981 T12982 compound cell,lines
R10769 T12982 T12978 pobj lines,In
R10770 T12983 T12986 punct ",",found
R10771 T12984 T12986 nsubjpass FLAG-SHARPIN,found
R10772 T12985 T12986 auxpass was,found
R10773 T12986 T12986 ROOT found,found
R10774 T12987 T12988 aux to,be
R10775 T12988 T12986 xcomp be,found
R10776 T12989 T12988 acomp cytoplasm-localized,be
R10777 T12990 T12986 punct .,found