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PMC:1310901 / 17536-19752 JSONTXT 16 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T9022 0-8 JJ denotes Specific
T9023 9-12 NNP denotes CpG
T9024 13-18 NNS denotes sites
T9025 19-21 IN denotes in
T9026 22-25 DT denotes the
T9027 26-31 NN denotes IRF-4
T9028 32-40 NN denotes promoter
T9029 41-44 VBP denotes are
T9030 45-55 VBN denotes methylated
T9031 56-58 IN denotes in
T9032 59-72 JJ denotes hematopoietic
T9033 73-78 NNS denotes cells
T9034 79-81 IN denotes In
T9035 82-87 NN denotes order
T9036 88-90 TO denotes to
T9037 91-98 RB denotes exactly
T9038 99-102 VB denotes map
T9039 103-106 DT denotes the
T9040 107-118 NN denotes methylation
T9041 119-124 NNS denotes sites
T9042 125-131 IN denotes within
T9043 132-135 DT denotes the
T9044 136-141 NN denotes IRF-4
T9045 142-150 NN denotes promoter
T9046 150-151 , denotes ,
T9047 152-154 PRP denotes we
T9048 155-162 VBD denotes treated
T9049 163-166 NNP denotes DNA
T9050 167-169 IN denotes of
T9051 170-176 NNP denotes Jurkat
T9052 176-177 , denotes ,
T9053 178-184 NNP denotes CML-T1
T9054 184-185 , denotes ,
T9055 186-191 NNP denotes U-937
T9056 191-192 , denotes ,
T9057 193-198 NNP denotes K-562
T9058 199-202 CC denotes and
T9059 203-207 NNP denotes EM-2
T9060 208-213 NNS denotes cells
T9061 214-216 RB denotes as
T9062 217-221 RB denotes well
T9063 222-224 IN denotes as
T9064 225-227 IN denotes of
T9065 228-232 NN denotes SD-1
T9066 232-233 , denotes ,
T9067 234-243 NN denotes RPMI-8226
T9068 244-247 CC denotes and
T9069 248-254 NN denotes BV-173
T9070 255-262 NN denotes control
T9071 263-268 NNS denotes cells
T9072 269-273 IN denotes with
T9073 274-283 NN denotes bisulfite
T9074 283-284 , denotes ,
T9075 285-290 WDT denotes which
T9076 291-301 RB denotes chemically
T9077 302-310 VBZ denotes converts
T9078 311-323 JJ denotes unmethylated
T9079 324-332 NN denotes cytosine
T9080 333-335 TO denotes to
T9081 336-342 VB denotes uracil
T9082 342-343 , denotes ,
T9083 344-351 IN denotes whereas
T9084 352-354 PRP denotes it
T9085 355-358 VBZ denotes has
T9086 359-361 DT denotes no
T9087 362-368 NN denotes effect
T9088 369-371 IN denotes on
T9089 372-382 JJ denotes methylated
T9090 383-391 NN denotes cytosine
T9091 391-392 , denotes ,
T9092 393-397 FW denotes i.e.
T9093 398-400 IN denotes in
T9094 401-404 NNP denotes CpG
T9095 405-406 -LRB- denotes (
T9096 406-408 CD denotes 34
T9097 408-409 -RRB- denotes )
T9098 409-410 . denotes .
T9099 411-415 DT denotes This
T9100 416-425 NN denotes technique
T9101 426-428 VBZ denotes is
T9102 429-439 RB denotes especially
T9103 440-446 JJ denotes useful
T9104 447-450 IN denotes for
T9105 451-460 NN denotes detection
T9106 461-463 IN denotes of
T9107 464-471 JJ denotes unknown
T9108 472-483 NN denotes methylation
T9109 484-492 NNS denotes patterns
T9110 492-493 . denotes .
T9111 494-497 NNP denotes PCR
T9112 498-511 NN denotes amplification
T9113 511-512 , denotes ,
T9114 513-520 VBG denotes cloning
T9115 521-524 CC denotes and
T9116 525-535 VBG denotes sequencing
T9117 536-538 IN denotes of
T9118 539-542 DT denotes the
T9119 543-560 JJ denotes bisulfite-treated
T9120 561-564 NN denotes DNA
T9121 565-571 VBD denotes showed
T9122 572-573 DT denotes a
T9123 574-582 JJ denotes specific
T9124 583-594 NN denotes methylation
T9125 595-602 NN denotes pattern
T9126 603-605 IN denotes of
T9127 606-609 DT denotes the
T9128 610-618 VBN denotes analyzed
T9129 619-621 CD denotes 62
T9130 622-625 NNP denotes CpG
T9131 626-631 NNS denotes sites
T9132 632-634 IN denotes in
T9133 635-638 DT denotes all
T9134 639-643 NN denotes cell
T9135 644-649 NNS denotes lines
T9136 650-651 -LRB- denotes (
T9137 651-657 NN denotes Figure
T9138 658-659 CD denotes 4
T9139 660-663 CC denotes and
T9140 664-669 NNP denotes Table
T9141 670-671 CD denotes 1
T9142 671-672 -RRB- denotes )
T9143 672-673 . denotes .
T9144 674-676 IN denotes In
T9145 677-684 JJ denotes general
T9146 684-685 , denotes ,
T9147 686-689 DT denotes the
T9148 690-703 JJ denotes methylational
T9149 704-710 NN denotes status
T9150 711-717 VBD denotes ranged
T9151 718-722 IN denotes from
T9152 723-726 CD denotes one
T9153 727-731 NN denotes cell
T9154 732-736 NN denotes line
T9155 737-741 IN denotes with
T9156 742-743 DT denotes a
T9157 744-750 RB denotes nearly
T9158 751-765 JJ denotes non-methylated
T9159 766-771 NN denotes IRF-4
T9160 772-780 NN denotes promoter
T9161 781-782 -LRB- denotes (
T9162 782-786 NN denotes SD-1
T9163 786-787 , denotes ,
T9164 788-802 JJ denotes IRF-4-positive
T9165 802-803 -RRB- denotes )
T9166 804-806 TO denotes to
T9167 807-808 DT denotes a
T9168 809-819 RB denotes completely
T9169 820-830 VBN denotes methylated
T9170 831-836 NN denotes IRF-4
T9171 837-845 NN denotes promoter
T9172 846-848 IN denotes in
T9173 849-855 NNP denotes CML-T1
T9174 856-857 -LRB- denotes (
T9175 857-871 JJ denotes IRF-4-negative
T9176 871-872 -RRB- denotes )
T9177 872-873 . denotes .
T9178 874-887 RB denotes Interestingly
T9179 887-888 , denotes ,
T9180 889-892 DT denotes the
T9181 893-903 NN denotes percentage
T9182 904-906 IN denotes of
T9183 907-910 NNP denotes CpG
T9184 911-922 NN denotes methylation
T9185 923-925 IN denotes in
T9186 926-929 DT denotes the
T9187 930-935 NN denotes IRF-4
T9188 936-944 NN denotes promoter
T9189 945-949 IN denotes from
T9190 950-964 JJ denotes IRF-4-positive
T9191 965-970 NNS denotes cells
T9192 971-974 VBD denotes was
T9193 975-979 RB denotes very
T9194 980-983 JJ denotes low
T9195 984-985 -LRB- denotes (
T9196 985-989 JJ denotes mean
T9197 990-992 CD denotes 24
T9198 992-993 NN denotes %
T9199 993-994 -RRB- denotes )
T9200 995-997 IN denotes as
T9201 998-1006 VBN denotes compared
T9202 1007-1011 IN denotes with
T9203 1012-1026 JJ denotes IRF-4-negative
T9204 1027-1032 NNS denotes cells
T9205 1033-1034 -LRB- denotes (
T9206 1034-1038 VB denotes mean
T9207 1039-1041 CD denotes 94
T9208 1041-1042 NN denotes %
T9209 1042-1043 -RRB- denotes )
T9210 1044-1045 -LRB- denotes (
T9211 1045-1051 NN denotes Figure
T9212 1052-1054 NN denotes 4A
T9213 1055-1058 CC denotes and
T9214 1059-1064 NNP denotes Table
T9215 1065-1066 CD denotes 1
T9216 1066-1067 -RRB- denotes )
T9217 1067-1068 . denotes .
T9218 1069-1070 DT denotes A
T9219 1071-1072 CD denotes 5
T9220 1072-1073 SYM denotes ′
T9221 1073-1074 : denotes -
T9222 1074-1080 NN denotes region
T9223 1081-1082 -LRB- denotes (
T9224 1082-1084 CD denotes R1
T9225 1084-1085 -RRB- denotes )
T9226 1086-1090 IN denotes with
T9227 1091-1093 CD denotes 13
T9228 1094-1109 VBD denotes hypermethylated
T9229 1110-1113 NNP denotes CpG
T9230 1114-1119 NNS denotes sites
T9231 1120-1121 -LRB- denotes (
T9232 1121-1125 JJ denotes mean
T9233 1126-1132 NN denotes number
T9234 1133-1135 IN denotes of
T9235 1136-1146 JJ denotes methylated
T9236 1147-1153 NNS denotes clones
T9237 1154-1157 CD denotes 5.5
T9238 1158-1160 IN denotes of
T9239 1161-1162 CD denotes 8
T9240 1163-1167 IN denotes with
T9241 1168-1170 CD denotes 77
T9242 1170-1171 NN denotes %
T9243 1172-1182 VBD denotes methylated
T9244 1183-1187 NNS denotes CpGs
T9245 1187-1188 -RRB- denotes )
T9246 1189-1192 VBD denotes was
T9247 1193-1198 VBN denotes found
T9248 1199-1201 IN denotes in
T9249 1202-1206 JJS denotes most
T9250 1207-1212 NNS denotes cells
T9251 1213-1214 -LRB- denotes (
T9252 1214-1220 IN denotes except
T9253 1221-1225 NNP denotes SD-1
T9254 1226-1229 CC denotes and
T9255 1230-1239 NNP denotes RPMI-8226
T9256 1239-1240 -RRB- denotes )
T9257 1241-1244 CC denotes and
T9258 1245-1246 DT denotes a
T9259 1247-1248 CD denotes 3
T9260 1248-1249 SYM denotes ′
T9261 1249-1250 : denotes -
T9262 1250-1256 NN denotes region
T9263 1257-1258 -LRB- denotes (
T9264 1258-1260 CD denotes R3
T9265 1260-1261 -RRB- denotes )
T9266 1262-1264 IN denotes of
T9267 1265-1266 CD denotes 6
T9268 1267-1281 VBD denotes hypomethylated
T9269 1282-1285 NNP denotes CpG
T9270 1286-1291 NNS denotes sites
T9271 1292-1293 -LRB- denotes (
T9272 1293-1297 JJ denotes mean
T9273 1298-1304 NN denotes number
T9274 1305-1307 IN denotes of
T9275 1308-1318 JJ denotes methylated
T9276 1319-1325 NNS denotes clones
T9277 1326-1329 CD denotes 1.7
T9278 1330-1332 IN denotes of
T9279 1333-1334 CD denotes 8
T9280 1335-1339 IN denotes with
T9281 1340-1342 CD denotes 33
T9282 1342-1343 NN denotes %
T9283 1344-1354 VBD denotes methylated
T9284 1355-1359 NNS denotes CpGs
T9285 1359-1360 -RRB- denotes )
T9286 1361-1364 VBD denotes was
T9287 1365-1370 VBN denotes found
T9288 1371-1373 IN denotes in
T9289 1374-1378 JJS denotes most
T9290 1379-1384 NNS denotes cells
T9291 1385-1386 -LRB- denotes (
T9292 1386-1392 IN denotes except
T9293 1393-1399 NNP denotes CML-T1
T9294 1400-1403 CC denotes and
T9295 1404-1409 NNP denotes U-937
T9296 1409-1410 -RRB- denotes )
T9297 1411-1412 -LRB- denotes (
T9298 1412-1418 NN denotes Figure
T9299 1419-1421 NN denotes 4A
T9300 1422-1425 CC denotes and
T9301 1426-1431 NNP denotes Table
T9302 1432-1433 CD denotes 1
T9303 1433-1434 -RRB- denotes )
T9304 1434-1435 . denotes .
T9305 1436-1448 RB denotes Intriguingly
T9306 1448-1449 , denotes ,
T9307 1450-1451 DT denotes a
T9308 1452-1459 NN denotes stretch
T9309 1460-1462 IN denotes of
T9310 1463-1465 CD denotes 13
T9311 1466-1469 NNP denotes CpG
T9312 1470-1475 NNS denotes sites
T9313 1476-1477 -LRB- denotes (
T9314 1477-1478 # denotes #
T9315 1478-1480 CD denotes 10
T9316 1481-1483 CD denotes 22
T9317 1483-1484 : denotes ;
T9318 1485-1487 NNP denotes R2
T9319 1487-1488 -RRB- denotes )
T9320 1489-1492 VBD denotes was
T9321 1493-1501 VBN denotes detected
T9322 1502-1504 IN denotes in
T9323 1505-1512 IN denotes between
T9324 1513-1518 DT denotes these
T9325 1519-1526 NNS denotes regions
T9326 1526-1527 , denotes ,
T9327 1528-1533 WDT denotes which
T9328 1534-1538 VBD denotes were
T9329 1539-1545 RB denotes highly
T9330 1546-1556 VBN denotes methylated
T9331 1557-1559 IN denotes in
T9332 1560-1574 JJ denotes IRF-4-negative
T9333 1575-1576 -LRB- denotes (
T9334 1576-1580 JJ denotes mean
T9335 1581-1587 NN denotes number
T9336 1588-1590 IN denotes of
T9337 1591-1601 JJ denotes methylated
T9338 1602-1608 NNS denotes clones
T9339 1609-1612 CD denotes 7.1
T9340 1613-1615 IN denotes of
T9341 1616-1617 CD denotes 8
T9342 1618-1622 IN denotes with
T9343 1623-1625 CD denotes 89
T9344 1625-1626 NN denotes %
T9345 1627-1637 VBD denotes methylated
T9346 1638-1642 NNS denotes CpGs
T9347 1642-1643 -RRB- denotes )
T9348 1644-1647 CC denotes but
T9349 1648-1655 RB denotes totally
T9350 1656-1670 JJ denotes non-methylated
T9351 1671-1673 IN denotes in
T9352 1674-1688 JJ denotes IRF-4-positive
T9353 1689-1694 NNS denotes cells
T9354 1695-1696 -LRB- denotes (
T9355 1696-1702 NN denotes Figure
T9356 1703-1705 CD denotes 4A
T9357 1706-1709 CC denotes and
T9358 1710-1711 NNP denotes B
T9359 1711-1712 -RRB- denotes )
T9360 1712-1713 . denotes .
T9361 1714-1725 RB denotes Furthermore
T9362 1725-1726 , denotes ,
T9363 1727-1732 CD denotes three
T9364 1733-1736 NNP denotes CpG
T9365 1737-1742 NNS denotes sites
T9366 1743-1745 IN denotes at
T9367 1746-1749 DT denotes the
T9368 1750-1751 CD denotes 5
T9369 1751-1752 NN denotes ′
T9370 1753-1756 NN denotes end
T9371 1757-1758 -LRB- denotes (
T9372 1758-1759 # denotes #
T9373 1759-1761 CD denotes 54
T9374 1761-1762 , denotes ,
T9375 1763-1765 CD denotes 56
T9376 1765-1766 , denotes ,
T9377 1767-1769 CD denotes 58
T9378 1769-1770 -RRB- denotes )
T9379 1771-1774 CC denotes and
T9380 1775-1778 CD denotes two
T9381 1779-1782 NNP denotes CpG
T9382 1783-1789 NNS denotes motifs
T9383 1790-1792 IN denotes at
T9384 1793-1796 DT denotes the
T9385 1797-1798 CD denotes 3
T9386 1798-1799 NN denotes ′
T9387 1800-1803 NN denotes end
T9388 1804-1805 -LRB- denotes (
T9389 1805-1806 # denotes #
T9390 1806-1807 CD denotes 1
T9391 1807-1808 , denotes ,
T9392 1809-1810 CD denotes 2
T9393 1810-1811 -RRB- denotes )
T9394 1812-1818 VBD denotes showed
T9395 1819-1823 DT denotes this
T9396 1824-1830 JJ denotes direct
T9397 1831-1842 NN denotes correlation
T9398 1843-1850 IN denotes between
T9399 1851-1855 JJ denotes high
T9400 1856-1867 NN denotes methylation
T9401 1868-1874 NN denotes status
T9402 1875-1878 CC denotes and
T9403 1879-1886 NN denotes absence
T9404 1887-1889 IN denotes of
T9405 1890-1895 NN denotes IRF-4
T9406 1896-1906 NN denotes expression
T9407 1906-1907 . denotes .
T9408 1908-1910 IN denotes In
T9409 1911-1919 NN denotes addition
T9410 1919-1920 , denotes ,
T9411 1921-1924 CD denotes two
T9412 1925-1928 NNP denotes CpG
T9413 1929-1934 NNS denotes sites
T9414 1935-1942 VBN denotes located
T9415 1943-1945 IN denotes in
T9416 1946-1947 DT denotes a
T9417 1948-1952 NNP denotes NFκB
T9418 1953-1954 -LRB- denotes (
T9419 1954-1955 # denotes #
T9420 1955-1957 CD denotes 48
T9421 1957-1958 -RRB- denotes )
T9422 1959-1962 CC denotes and
T9423 1963-1964 DT denotes a
T9424 1965-1968 NNP denotes SP1
T9425 1969-1976 NN denotes element
T9426 1977-1978 -LRB- denotes (
T9427 1978-1979 # denotes #
T9428 1979-1981 CD denotes 45
T9429 1981-1982 -RRB- denotes )
T9430 1983-1986 VBP denotes are
T9431 1987-1991 RBR denotes less
T9432 1992-2002 VBN denotes methylated
T9433 2003-2005 IN denotes in
T9434 2006-2020 JJ denotes IRF-4-positive
T9435 2021-2025 IN denotes than
T9436 2026-2028 IN denotes in
T9437 2029-2043 JJ denotes IRF-4-negative
T9438 2044-2049 NNS denotes cells
T9439 2050-2051 -LRB- denotes (
T9440 2051-2055 JJ denotes mean
T9441 2056-2062 NN denotes number
T9442 2063-2065 IN denotes of
T9443 2066-2076 JJ denotes methylated
T9444 2077-2083 NNS denotes clones
T9445 2083-2084 : denotes :
T9446 2085-2088 CD denotes 1/8
T9447 2089-2095 CC denotes versus
T9448 2096-2099 CD denotes 8/8
T9449 2099-2100 -RRB- denotes )
T9450 2100-2101 . denotes .
T9451 2102-2107 DT denotes These
T9452 2108-2115 NNS denotes results
T9453 2116-2124 VBP denotes indicate
T9454 2125-2128 DT denotes the
T9455 2129-2140 NN denotes involvement
T9456 2141-2143 IN denotes of
T9457 2144-2147 NNP denotes CpG
T9458 2148-2159 NN denotes methylation
T9459 2160-2162 IN denotes in
T9460 2163-2166 DT denotes the
T9461 2167-2177 NN denotes regulation
T9462 2178-2180 IN denotes of
T9463 2181-2186 NN denotes IRF-4
T9464 2187-2197 NN denotes expression
T9465 2198-2200 IN denotes in
T9466 2201-2209 JJ denotes leukemic
T9467 2210-2215 NNS denotes cells
T9468 2215-2216 . denotes .
R7513 T9022 T9024 amod Specific,sites
R7514 T9023 T9024 compound CpG,sites
R7515 T9024 T9030 nsubjpass sites,methylated
R7516 T9025 T9024 prep in,sites
R7517 T9026 T9028 det the,promoter
R7518 T9027 T9028 compound IRF-4,promoter
R7519 T9028 T9025 pobj promoter,in
R7520 T9029 T9030 auxpass are,methylated
R7521 T9030 T9030 ROOT methylated,methylated
R7522 T9031 T9030 prep in,methylated
R7523 T9032 T9033 amod hematopoietic,cells
R7524 T9033 T9031 pobj cells,in
R7525 T9034 T9048 prep In,treated
R7526 T9035 T9034 pobj order,In
R7527 T9036 T9038 aux to,map
R7528 T9037 T9038 advmod exactly,map
R7529 T9038 T9035 acl map,order
R7530 T9039 T9041 det the,sites
R7531 T9040 T9041 compound methylation,sites
R7532 T9041 T9038 dobj sites,map
R7533 T9042 T9041 prep within,sites
R7534 T9043 T9045 det the,promoter
R7535 T9044 T9045 compound IRF-4,promoter
R7536 T9045 T9042 pobj promoter,within
R7537 T9046 T9048 punct ",",treated
R7538 T9047 T9048 nsubj we,treated
R7539 T9048 T9048 ROOT treated,treated
R7540 T9049 T9060 nmod DNA,cells
R7541 T9050 T9049 prep of,DNA
R7542 T9051 T9050 pobj Jurkat,of
R7543 T9052 T9051 punct ",",Jurkat
R7544 T9053 T9051 conj CML-T1,Jurkat
R7545 T9054 T9053 punct ",",CML-T1
R7546 T9055 T9053 conj U-937,CML-T1
R7547 T9056 T9055 punct ",",U-937
R7548 T9057 T9055 conj K-562,U-937
R7549 T9058 T9057 cc and,K-562
R7550 T9059 T9057 conj EM-2,K-562
R7551 T9060 T9048 dobj cells,treated
R7552 T9061 T9063 advmod as,as
R7553 T9062 T9063 advmod well,as
R7554 T9063 T9048 prep as,treated
R7555 T9064 T9063 prep of,as
R7556 T9065 T9064 pobj SD-1,of
R7557 T9066 T9065 punct ",",SD-1
R7558 T9067 T9065 conj RPMI-8226,SD-1
R7559 T9068 T9067 cc and,RPMI-8226
R7560 T9069 T9067 conj BV-173,RPMI-8226
R7561 T9070 T9071 compound control,cells
R7562 T9071 T9048 advcl cells,treated
R7563 T9072 T9071 prep with,cells
R7564 T9073 T9072 pobj bisulfite,with
R7565 T9074 T9073 punct ",",bisulfite
R7566 T9075 T9077 nsubj which,converts
R7567 T9076 T9077 advmod chemically,converts
R7568 T9077 T9073 relcl converts,bisulfite
R7569 T9078 T9079 amod unmethylated,cytosine
R7570 T9079 T9077 dobj cytosine,converts
R7571 T9080 T9081 aux to,uracil
R7572 T9081 T9077 xcomp uracil,converts
R7573 T9082 T9048 punct ",",treated
R7574 T9083 T9085 mark whereas,has
R7575 T9084 T9085 nsubj it,has
R7576 T9085 T9048 advcl has,treated
R7577 T9086 T9087 det no,effect
R7578 T9087 T9085 dobj effect,has
R7579 T9088 T9087 prep on,effect
R7580 T9089 T9090 amod methylated,cytosine
R7581 T9090 T9088 pobj cytosine,on
R7582 T9091 T9085 punct ",",has
R7583 T9092 T9093 advmod i.e.,in
R7584 T9093 T9085 prep in,has
R7585 T9094 T9093 pobj CpG,in
R7586 T9095 T9094 punct (,CpG
R7587 T9096 T9094 appos 34,CpG
R7588 T9097 T9094 punct ),CpG
R7589 T9098 T9048 punct .,treated
R7590 T9099 T9100 det This,technique
R7591 T9100 T9101 nsubj technique,is
R7592 T9101 T9101 ROOT is,is
R7593 T9102 T9103 advmod especially,useful
R7594 T9103 T9101 acomp useful,is
R7595 T9104 T9103 prep for,useful
R7596 T9105 T9104 pobj detection,for
R7597 T9106 T9105 prep of,detection
R7598 T9107 T9109 amod unknown,patterns
R7599 T9108 T9109 compound methylation,patterns
R7600 T9109 T9106 pobj patterns,of
R7601 T9110 T9101 punct .,is
R7602 T9111 T9112 compound PCR,amplification
R7603 T9112 T9121 nsubj amplification,showed
R7604 T9113 T9112 punct ",",amplification
R7605 T9114 T9112 conj cloning,amplification
R7606 T9115 T9114 cc and,cloning
R7607 T9116 T9114 conj sequencing,cloning
R7608 T9117 T9116 prep of,sequencing
R7609 T9118 T9120 det the,DNA
R7610 T9119 T9120 amod bisulfite-treated,DNA
R7611 T9120 T9117 pobj DNA,of
R7612 T9121 T9121 ROOT showed,showed
R7613 T9122 T9125 det a,pattern
R7614 T9123 T9125 amod specific,pattern
R7615 T9124 T9125 compound methylation,pattern
R7616 T9125 T9121 dobj pattern,showed
R7617 T9126 T9125 prep of,pattern
R7618 T9127 T9131 det the,sites
R7619 T9128 T9131 amod analyzed,sites
R7620 T9129 T9131 nummod 62,sites
R7621 T9130 T9131 compound CpG,sites
R7622 T9131 T9126 pobj sites,of
R7623 T9132 T9131 prep in,sites
R7624 T9133 T9135 det all,lines
R7625 T9134 T9135 compound cell,lines
R7626 T9135 T9132 pobj lines,in
R7627 T9136 T9137 punct (,Figure
R7628 T9137 T9125 appos Figure,pattern
R7629 T9138 T9137 nummod 4,Figure
R7630 T9139 T9137 cc and,Figure
R7631 T9140 T9137 conj Table,Figure
R7632 T9141 T9140 nummod 1,Table
R7633 T9142 T9125 punct ),pattern
R7634 T9143 T9121 punct .,showed
R7635 T9144 T9150 prep In,ranged
R7636 T9145 T9144 amod general,In
R7637 T9146 T9150 punct ",",ranged
R7638 T9147 T9149 det the,status
R7639 T9148 T9149 amod methylational,status
R7640 T9149 T9150 nsubj status,ranged
R7641 T9150 T9150 ROOT ranged,ranged
R7642 T9151 T9150 prep from,ranged
R7643 T9152 T9154 nummod one,line
R7644 T9153 T9154 compound cell,line
R7645 T9154 T9151 pobj line,from
R7646 T9155 T9154 prep with,line
R7647 T9156 T9160 det a,promoter
R7648 T9157 T9158 advmod nearly,non-methylated
R7649 T9158 T9160 amod non-methylated,promoter
R7650 T9159 T9160 compound IRF-4,promoter
R7651 T9160 T9155 pobj promoter,with
R7652 T9161 T9160 punct (,promoter
R7653 T9162 T9160 appos SD-1,promoter
R7654 T9163 T9162 punct ",",SD-1
R7655 T9164 T9162 appos IRF-4-positive,SD-1
R7656 T9165 T9162 punct ),SD-1
R7657 T9166 T9160 prep to,promoter
R7658 T9167 T9171 det a,promoter
R7659 T9168 T9169 advmod completely,methylated
R7660 T9169 T9171 amod methylated,promoter
R7661 T9170 T9171 compound IRF-4,promoter
R7662 T9171 T9166 pobj promoter,to
R7663 T9172 T9171 prep in,promoter
R7664 T9173 T9172 pobj CML-T1,in
R7665 T9174 T9175 punct (,IRF-4-negative
R7666 T9175 T9173 appos IRF-4-negative,CML-T1
R7667 T9176 T9175 punct ),IRF-4-negative
R7668 T9177 T9150 punct .,ranged
R7669 T9178 T9192 advmod Interestingly,was
R7670 T9179 T9192 punct ",",was
R7671 T9180 T9181 det the,percentage
R7672 T9181 T9192 nsubj percentage,was
R7673 T9182 T9181 prep of,percentage
R7674 T9183 T9184 compound CpG,methylation
R7675 T9184 T9182 pobj methylation,of
R7676 T9185 T9181 prep in,percentage
R7677 T9186 T9188 det the,promoter
R7678 T9187 T9188 compound IRF-4,promoter
R7679 T9188 T9185 pobj promoter,in
R7680 T9189 T9188 prep from,promoter
R7681 T9190 T9191 amod IRF-4-positive,cells
R7682 T9191 T9189 pobj cells,from
R7683 T9192 T9192 ROOT was,was
R7684 T9193 T9194 advmod very,low
R7685 T9194 T9192 acomp low,was
R7686 T9195 T9206 punct (,mean
R7687 T9196 T9206 meta mean,mean
R7688 T9197 T9198 nummod 24,%
R7689 T9198 T9196 dobj %,mean
R7690 T9199 T9196 punct ),mean
R7691 T9200 T9206 prep as,mean
R7692 T9201 T9200 prep compared,as
R7693 T9202 T9201 prep with,compared
R7694 T9203 T9204 amod IRF-4-negative,cells
R7695 T9204 T9202 pobj cells,with
R7696 T9205 T9206 punct (,mean
R7697 T9206 T9192 parataxis mean,was
R7698 T9207 T9208 nummod 94,%
R7699 T9208 T9206 dobj %,mean
R7700 T9209 T9206 punct ),mean
R7701 T9210 T9212 punct (,4A
R7702 T9211 T9212 compound Figure,4A
R7703 T9212 T9192 attr 4A,was
R7704 T9213 T9212 cc and,4A
R7705 T9214 T9212 conj Table,4A
R7706 T9215 T9214 nummod 1,Table
R7707 T9216 T9214 punct ),Table
R7708 T9217 T9192 punct .,was
R7709 T9218 T9222 det A,region
R7710 T9219 T9222 nummod 5,region
R7711 T9220 T9222 punct ′,region
R7712 T9221 T9222 punct -,region
R7713 T9222 T9247 nsubjpass region,found
R7714 T9223 T9222 punct (,region
R7715 T9224 T9222 appos R1,region
R7716 T9225 T9222 punct ),region
R7717 T9226 T9222 prep with,region
R7718 T9227 T9230 nummod 13,sites
R7719 T9228 T9230 amod hypermethylated,sites
R7720 T9229 T9230 compound CpG,sites
R7721 T9230 T9226 pobj sites,with
R7722 T9231 T9230 punct (,sites
R7723 T9232 T9233 amod mean,number
R7724 T9233 T9230 appos number,sites
R7725 T9234 T9233 prep of,number
R7726 T9235 T9236 amod methylated,clones
R7727 T9236 T9234 pobj clones,of
R7728 T9237 T9233 appos 5.5,number
R7729 T9238 T9237 prep of,5.5
R7730 T9239 T9238 pobj 8,of
R7731 T9240 T9237 prep with,5.5
R7732 T9241 T9242 nummod 77,%
R7733 T9242 T9240 pobj %,with
R7734 T9243 T9244 amod methylated,CpGs
R7735 T9244 T9242 appos CpGs,%
R7736 T9245 T9233 punct ),number
R7737 T9246 T9247 auxpass was,found
R7738 T9247 T9247 ROOT found,found
R7739 T9248 T9247 prep in,found
R7740 T9249 T9250 amod most,cells
R7741 T9250 T9248 pobj cells,in
R7742 T9251 T9247 punct (,found
R7743 T9252 T9247 prep except,found
R7744 T9253 T9252 pobj SD-1,except
R7745 T9254 T9253 cc and,SD-1
R7746 T9255 T9253 conj RPMI-8226,SD-1
R7747 T9256 T9255 punct ),RPMI-8226
R7748 T9257 T9247 cc and,found
R7749 T9258 T9262 det a,region
R7750 T9259 T9262 nummod 3,region
R7751 T9260 T9262 punct ′,region
R7752 T9261 T9262 punct -,region
R7753 T9262 T9268 nsubj region,hypomethylated
R7754 T9263 T9262 punct (,region
R7755 T9264 T9262 appos R3,region
R7756 T9265 T9262 punct ),region
R7757 T9266 T9262 prep of,region
R7758 T9267 T9266 pobj 6,of
R7759 T9268 T9247 conj hypomethylated,found
R7760 T9269 T9270 compound CpG,sites
R7761 T9270 T9268 dobj sites,hypomethylated
R7762 T9271 T9270 punct (,sites
R7763 T9272 T9273 amod mean,number
R7764 T9273 T9287 nsubjpass number,found
R7765 T9274 T9273 prep of,number
R7766 T9275 T9276 amod methylated,clones
R7767 T9276 T9274 pobj clones,of
R7768 T9277 T9273 appos 1.7,number
R7769 T9278 T9277 prep of,1.7
R7770 T9279 T9278 pobj 8,of
R7771 T9280 T9277 prep with,1.7
R7772 T9281 T9282 nummod 33,%
R7773 T9282 T9284 compound %,CpGs
R7774 T9283 T9284 compound methylated,CpGs
R7775 T9284 T9280 pobj CpGs,with
R7776 T9285 T9273 punct ),number
R7777 T9286 T9287 auxpass was,found
R7778 T9287 T9268 conj found,hypomethylated
R7779 T9288 T9287 prep in,found
R7780 T9289 T9290 amod most,cells
R7781 T9290 T9288 pobj cells,in
R7782 T9291 T9287 punct (,found
R7783 T9292 T9287 prep except,found
R7784 T9293 T9292 pobj CML-T1,except
R7785 T9294 T9293 cc and,CML-T1
R7786 T9295 T9293 conj U-937,CML-T1
R7787 T9296 T9293 punct ),CML-T1
R7788 T9297 T9299 punct (,4A
R7789 T9298 T9299 compound Figure,4A
R7790 T9299 T9293 appos 4A,CML-T1
R7791 T9300 T9299 cc and,4A
R7792 T9301 T9299 conj Table,4A
R7793 T9302 T9301 nummod 1,Table
R7794 T9303 T9301 punct ),Table
R7795 T9304 T9287 punct .,found
R7796 T9305 T9321 advmod Intriguingly,detected
R7797 T9306 T9321 punct ",",detected
R7798 T9307 T9308 det a,stretch
R7799 T9308 T9321 nsubjpass stretch,detected
R7800 T9309 T9308 prep of,stretch
R7801 T9310 T9312 nummod 13,sites
R7802 T9311 T9312 compound CpG,sites
R7803 T9312 T9309 pobj sites,of
R7804 T9313 T9312 punct (,sites
R7805 T9314 T9315 nmod #,10
R7806 T9315 T9312 appos 10,sites
R7807 T9316 T9315 appos 22,10
R7808 T9317 T9315 punct ;,10
R7809 T9318 T9315 appos R2,10
R7810 T9319 T9312 punct ),sites
R7811 T9320 T9321 auxpass was,detected
R7812 T9321 T9321 ROOT detected,detected
R7813 T9322 T9321 prep in,detected
R7814 T9323 T9322 prep between,in
R7815 T9324 T9325 det these,regions
R7816 T9325 T9323 pobj regions,between
R7817 T9326 T9325 punct ",",regions
R7818 T9327 T9330 nsubjpass which,methylated
R7819 T9328 T9330 auxpass were,methylated
R7820 T9329 T9330 advmod highly,methylated
R7821 T9330 T9325 relcl methylated,regions
R7822 T9331 T9330 prep in,methylated
R7823 T9332 T9335 amod IRF-4-negative,number
R7824 T9333 T9335 punct (,number
R7825 T9334 T9335 amod mean,number
R7826 T9335 T9331 pobj number,in
R7827 T9336 T9335 prep of,number
R7828 T9337 T9338 amod methylated,clones
R7829 T9338 T9336 pobj clones,of
R7830 T9339 T9335 nummod 7.1,number
R7831 T9340 T9339 prep of,7.1
R7832 T9341 T9340 pobj 8,of
R7833 T9342 T9330 prep with,methylated
R7834 T9343 T9344 nummod 89,%
R7835 T9344 T9342 pobj %,with
R7836 T9345 T9346 amod methylated,CpGs
R7837 T9346 T9344 appos CpGs,%
R7838 T9347 T9330 punct ),methylated
R7839 T9348 T9330 cc but,methylated
R7840 T9349 T9350 advmod totally,non-methylated
R7841 T9350 T9321 conj non-methylated,detected
R7842 T9351 T9350 prep in,non-methylated
R7843 T9352 T9353 amod IRF-4-positive,cells
R7844 T9353 T9351 pobj cells,in
R7845 T9354 T9355 punct (,Figure
R7846 T9355 T9355 ROOT Figure,Figure
R7847 T9356 T9355 nummod 4A,Figure
R7848 T9357 T9355 cc and,Figure
R7849 T9358 T9355 conj B,Figure
R7850 T9359 T9355 punct ),Figure
R7851 T9360 T9321 punct .,detected
R7852 T9361 T9394 advmod Furthermore,showed
R7853 T9362 T9394 punct ",",showed
R7854 T9363 T9365 nummod three,sites
R7855 T9364 T9365 compound CpG,sites
R7856 T9365 T9394 nsubj sites,showed
R7857 T9366 T9365 prep at,sites
R7858 T9367 T9370 det the,end
R7859 T9368 T9369 nummod 5,′
R7860 T9369 T9370 compound ′,end
R7861 T9370 T9366 pobj end,at
R7862 T9371 T9370 punct (,end
R7863 T9372 T9377 punct #,58
R7864 T9373 T9372 nummod 54,#
R7865 T9374 T9375 punct ",",56
R7866 T9375 T9377 dep 56,58
R7867 T9376 T9377 punct ",",58
R7868 T9377 T9370 appos 58,end
R7869 T9378 T9370 punct ),end
R7870 T9379 T9365 cc and,sites
R7871 T9380 T9382 nummod two,motifs
R7872 T9381 T9382 compound CpG,motifs
R7873 T9382 T9365 conj motifs,sites
R7874 T9383 T9382 prep at,motifs
R7875 T9384 T9387 det the,end
R7876 T9385 T9386 nummod 3,′
R7877 T9386 T9387 compound ′,end
R7878 T9387 T9383 pobj end,at
R7879 T9388 T9394 punct (,showed
R7880 T9389 T9394 nsubj #,showed
R7881 T9390 T9389 nummod 1,#
R7882 T9391 T9389 punct ",",#
R7883 T9392 T9389 appos 2,#
R7884 T9393 T9394 punct ),showed
R7885 T9394 T9394 ROOT showed,showed
R7886 T9395 T9397 det this,correlation
R7887 T9396 T9397 amod direct,correlation
R7888 T9397 T9394 dobj correlation,showed
R7889 T9398 T9397 prep between,correlation
R7890 T9399 T9400 amod high,methylation
R7891 T9400 T9401 compound methylation,status
R7892 T9401 T9398 pobj status,between
R7893 T9402 T9401 cc and,status
R7894 T9403 T9401 conj absence,status
R7895 T9404 T9401 prep of,status
R7896 T9405 T9406 compound IRF-4,expression
R7897 T9406 T9404 pobj expression,of
R7898 T9407 T9394 punct .,showed
R7899 T9408 T9430 prep In,are
R7900 T9409 T9408 pobj addition,In
R7901 T9410 T9430 punct ",",are
R7902 T9411 T9413 nummod two,sites
R7903 T9412 T9413 compound CpG,sites
R7904 T9413 T9430 nsubj sites,are
R7905 T9414 T9413 acl located,sites
R7906 T9415 T9414 prep in,located
R7907 T9416 T9417 det a,NFκB
R7908 T9417 T9415 pobj NFκB,in
R7909 T9418 T9417 punct (,NFκB
R7910 T9419 T9420 nmod #,48
R7911 T9420 T9414 npadvmod 48,located
R7912 T9421 T9414 punct ),located
R7913 T9422 T9414 cc and,located
R7914 T9423 T9425 det a,element
R7915 T9424 T9425 compound SP1,element
R7916 T9425 T9413 conj element,sites
R7917 T9426 T9425 punct (,element
R7918 T9427 T9428 nmod #,45
R7919 T9428 T9425 appos 45,element
R7920 T9429 T9425 punct ),element
R7921 T9430 T9430 ROOT are,are
R7922 T9431 T9432 advmod less,methylated
R7923 T9432 T9430 attr methylated,are
R7924 T9433 T9432 prep in,methylated
R7925 T9434 T9433 pobj IRF-4-positive,in
R7926 T9435 T9432 prep than,methylated
R7927 T9436 T9435 prep in,than
R7928 T9437 T9438 amod IRF-4-negative,cells
R7929 T9438 T9436 pobj cells,in
R7930 T9439 T9432 punct (,methylated
R7931 T9440 T9441 amod mean,number
R7932 T9441 T9432 appos number,methylated
R7933 T9442 T9441 prep of,number
R7934 T9443 T9444 amod methylated,clones
R7935 T9444 T9442 pobj clones,of
R7936 T9445 T9441 punct :,number
R7937 T9446 T9441 appos 1/8,number
R7938 T9447 T9446 cc versus,1/8
R7939 T9448 T9446 conj 8/8,1/8
R7940 T9449 T9441 punct ),number
R7941 T9450 T9430 punct .,are
R7942 T9451 T9452 det These,results
R7943 T9452 T9453 nsubj results,indicate
R7944 T9453 T9453 ROOT indicate,indicate
R7945 T9454 T9455 det the,involvement
R7946 T9455 T9453 dobj involvement,indicate
R7947 T9456 T9455 prep of,involvement
R7948 T9457 T9458 compound CpG,methylation
R7949 T9458 T9456 pobj methylation,of
R7950 T9459 T9458 prep in,methylation
R7951 T9460 T9461 det the,regulation
R7952 T9461 T9459 pobj regulation,in
R7953 T9462 T9461 prep of,regulation
R7954 T9463 T9464 compound IRF-4,expression
R7955 T9464 T9462 pobj expression,of
R7956 T9465 T9461 prep in,regulation
R7957 T9466 T9467 amod leukemic,cells
R7958 T9467 T9465 pobj cells,in
R7959 T9468 T9453 punct .,indicate