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bionlp-st-ge-2016-reference-eval

Evaluation #2 List

Note	Exact matching
Study project	bionlp-st-ge-2016-reference-eval
Reference project	bionlp-st-ge-2016-reference
Evaluator	PubAnnotationGeneric
Soft match characters	0
Soft match words	0
Denotations type match
Relations type match
Updated at	2022-02-08 12:21:01 UTC

Result JSON

Below is the result of evaluation performed for the 1 documents that are shared by the study and the reference projects.

Denotations

	Study count		Reference count		Prec.	Recall	F-score
	all	match	all	match	Prec.	Recall	F-score
Binding	3	3.00	3	3.00	1.00	1.00	1.00	TPs FPs FNs
Entity	11	11.00	11	11.00	1.00	1.00	1.00	TPs FPs FNs
Gene_expression	104	96.00	100	96.00	0.92	0.96	0.94	TPs FPs FNs
Negative_regulation	23	23.00	25	23.00	1.00	0.92	0.96	TPs FPs FNs
Positive_regulation	22	22.00	23	22.00	1.00	0.96	0.98	TPs FPs FNs
Protein	209	199.00	206	199.00	0.95	0.97	0.96	TPs FPs FNs
Regulation	24	21.00	22	21.00	0.88	0.95	0.91	TPs FPs FNs
Transcription	30	30.00	37	30.00	1.00	0.81	0.90	TPs FPs FNs
All	426	405.00	427	405.00	0.95	0.95	0.95	TPs FPs FNs

Relations

	Study count		Reference count		Prec.	Recall	F-score
	all	match	all	match	Prec.	Recall	F-score
causeOf	4	4.00	4	4.00	1.00	1.00	1.00	TPs FPs FNs
equivalentTo	12	12.00	13	12.00	1.00	0.92	0.96	TPs FPs FNs
partOf	11	11.00	11	11.00	1.00	1.00	1.00	TPs FPs FNs
themeOf	205	194.00	212	194.00	0.95	0.92	0.93	TPs FPs FNs
All	232	221.00	240	221.00	0.95	0.92	0.94	TPs FPs FNs