bionlp-ost-19-SeeDev-bin-train  

SeeDev-binary@ldeleger:SeeDev-binary-19594710-4 JSONTXT

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Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1 0-4 Protein denotes WRI1
E17 0-4 Binds_To denotes WRI1
T2 18-24 Box denotes AW-box
T4 50-54 Protein denotes WRI1
E21 50-54 Binds_To denotes WRI1
E22 50-54 Binds_To denotes WRI1
E23 50-54 Binds_To denotes WRI1
E24 50-54 Binds_To denotes WRI1
T3 50-68 Box denotes WRI1 binding sites
T7-0 76-95 _FRAGMENT denotes upstream regions of
T8-0 76-95 _FRAGMENT denotes upstream regions of
T6-0 76-96 _FRAGMENT denotes upstream regions of
T5 76-103 Promoter denotes upstream regions of Pl-PKβ1
T9 96-103 Gene denotes Pl-PKβ1
T6-1 105-109 Promoter denotes KAS1
T10 105-109 Gene denotes KAS1
T7-1 111-116 Promoter denotes BCCP2
T11 111-116 Gene denotes BCCP2
T8-1 122-126 Promoter denotes SUS2
T12 122-126 Gene denotes SUS2
T13 151-157 Box denotes AW-box
E10 151-157 Composes_Primary_Structure denotes AW-box
E11 151-157 Composes_Primary_Structure denotes AW-box
E15 151-157 Composes_Primary_Structure denotes AW-box
E16 151-157 Composes_Primary_Structure denotes AW-box
T14 167-188 Box denotes 5′-[CnTnG](n)7[CG]-3′
E13 167-188 Composes_Primary_Structure denotes 5′-[CnTnG](n)7[CG]-3′
T15 240-257 Box denotes AW-box of Pl-PKβ1
T16 250-257 Gene denotes Pl-PKβ1
T17 328-332 Protein denotes WRI1
E20 328-332 Binds_To denotes WRI1
T18 382-393 Genotype denotes Arabidopsis
T19 394-397 Protein denotes ANT
T20 508-511 Protein denotes ANT
T22 542-545 Protein denotes AP2
T21 542-553 Protein_Domain denotes AP2 domains
E19 542-553 Binds_To denotes AP2 domains
T23 625-663 Box denotes 5′-gCAC(A/G)N(A/T)TcCC(a/g)ANG(c/t)-3′
T24 709-715 Box denotes AW-box
E25 709-715 Has_Sequence_Identical_To denotes AW-box
T26 803-806 Protein denotes ANT
T25-0 803-807 _FRAGMENT denotes ANT-
T28 812-816 Protein denotes WRI1
T27 812-829 Box denotes WRI1-binding site
T25-1 817-829 Box denotes binding site
T30 905-908 Protein denotes AP2
T29 905-915 Protein_Domain denotes AP2 domain
T31 921-962 Box denotes 3′-half of the 16-bp ANT-binding sequence
T32 942-945 Protein denotes ANT
T33 981-994 Box denotes DRE sequences
E27 981-994 Is_Functionally_Equivalent_To denotes DRE sequences
T34 996-1001 Box denotes CCGAC
T36 1013-1018 Protein denotes EREBP
T35 1013-1023 Protein_Family denotes EREBP-like
T38 1031-1034 Protein denotes AP2
T37 1031-1041 Protein_Domain denotes AP2 domain
E12 1031-1041 Is_Protein_Domain_Of denotes AP2 domain
E18 1031-1041 Binds_To denotes AP2 domain
T40 1077-1080 Protein denotes AP2
T39 1077-1088 Protein_Domain denotes AP2 domains
T41 1092-1095 Protein denotes ANT
T42 1182-1244 Box denotes opposite strand sequence of the ANT-binding consensus sequence
E26 1182-1244 Is_Functionally_Equivalent_To denotes opposite strand sequence of the ANT-binding consensus sequence
T44 1214-1217 Protein denotes ANT
T43 1214-1244 Box denotes ANT-binding consensus sequence
T45 1246-1285 Box denotes 5′-(g/a)CnT(t/c)GggA(A/T)n-(T/C)GTGc-3′
T46 1297-1304 Box denotes [CnTnG]
E14 1297-1304 Composes_Primary_Structure denotes [CnTnG]
T47 1317-1323 Box denotes AW-box
T48 1377-1379 Box denotes TG
T49 1392-1394 Box denotes CG
T50 1402-1408 Box denotes AW-box
T52 1414-1417 Protein denotes AP2
T51 1414-1444 Protein_Family denotes AP2-type transcription factors
E8 1414-1444 Regulates_Development_Phase denotes AP2-type transcription factors
E9 1414-1444 Regulates_Process denotes AP2-type transcription factors
T54 1505-1513 Tissue denotes meristem
T53 1505-1522 Regulatory_Network denotes meristem function
T56 1527-1532 Tissue denotes organ
T55 1527-1544 Development_Phase denotes organ development
T57 1559-1562 Protein denotes AP2
E7 1559-1562 Regulates_Process denotes AP2
T59 1700-1704 Tissue denotes seed
T58 1700-1709 Regulatory_Network denotes seed size
T60 1731-1734 Protein denotes ANT
E1 1731-1734 Regulates_Development_Phase denotes ANT
E4 1731-1734 Regulates_Development_Phase denotes ANT
T62 1745-1750 Tissue denotes ovule
T61 1745-1762 Development_Phase denotes ovule development
T64 1767-1779 Tissue denotes floral organ
T63 1767-1786 Development_Phase denotes floral organ growth
T65 1843-1852 Protein denotes PLETHORA1
T66 1854-1858 Protein denotes PLT1
E2 1854-1858 Regulates_Process denotes PLT1
E3 1854-1858 Regulates_Process denotes PLT1
E28 1854-1858 Is_Functionally_Equivalent_To denotes PLT1
E39 1854-1858 Is_Localized_In denotes PLT1
T67 1864-1868 Protein denotes PLT2
E5 1864-1868 Regulates_Process denotes PLT2
E6 1864-1868 Regulates_Process denotes PLT2
E40 1864-1868 Is_Localized_In denotes PLT2
T69 1886-1895 Tissue denotes stem cell
T70-0 1886-1895 _FRAGMENT denotes stem cell
T68 1886-1909 Regulatory_Network denotes stem cell specification
T70-1 1914-1925 Regulatory_Network denotes maintenance
T71 1933-1946 Tissue denotes root meristem
E41 1933-1946 Regulates_Process denotes root meristem
E42 1933-1946 Regulates_Process denotes root meristem
T72 1972-2003 Protein_Family denotes AP-2 type transcription factors
T73 2017-2022 Genotype denotes plant
T74 2102-2106 Protein denotes WRI1
E29 2102-2106 Is_Member_Of_Family denotes WRI1
T75 2138-2142 Protein denotes WRI1
T76 2143-2148 Protein denotes ASML1
T77 2164-2168 Protein denotes WAT1
E32 2164-2168 Is_Member_Of_Family denotes WAT1
E38 2164-2168 Exists_In_Genotype denotes WAT1
T78 2170-2179 Gene denotes At1g16060
E34 2170-2179 Transcribes_Or_Translates_To denotes At1g16060
E36 2170-2179 Exists_In_Genotype denotes At1g16060
T79 2189-2193 Protein denotes WAT2
E30 2189-2193 Is_Member_Of_Family denotes WAT2
E37 2189-2193 Exists_In_Genotype denotes WAT2
T80 2195-2204 Gene denotes At1g79700
E33 2195-2204 Transcribes_Or_Translates_To denotes At1g79700
E35 2195-2204 Exists_In_Genotype denotes At1g79700
T81 2210-2221 Genotype denotes Arabidopsis
T82 2260-2263 Protein denotes ANT
E31 2260-2263 Is_Member_Of_Family denotes ANT
T84 2330-2333 Protein denotes AP2
T83 2330-2338 Protein_Family denotes AP2-type
T85 2437-2476 Protein_Family denotes double AP2 domain transcription factors
T87 2444-2447 Protein denotes AP2
T86 2444-2454 Protein_Domain denotes AP2 domain
C-T25-0 T25-1 T25-0 _lexicallyChainedTo binding site,ANT-
C-T6-0 T6-1 T6-0 _lexicallyChainedTo KAS1,upstream regions of
C-T7-0 T7-1 T7-0 _lexicallyChainedTo BCCP2,upstream regions of
C-T70-0 T70-1 T70-0 _lexicallyChainedTo maintenance,stem cell
C-T8-0 T8-1 T8-0 _lexicallyChainedTo SUS2,upstream regions of
R1 E1 T60 Agent ANT,ANT
R10 E5 T68 Process PLT2,stem cell specification
R11 E6 T67 Agent PLT2,PLT2
R12 E6 T70-0 Process PLT2,stem cell
R13 E7 T57 Agent AP2,AP2
R14 E7 T58 Process AP2,seed size
R15 E8 T51 Agent AP2-type transcription factors,AP2-type transcription factors
R16 E8 T55 Development AP2-type transcription factors,organ development
R17 E9 T51 Agent AP2-type transcription factors,AP2-type transcription factors
R18 E9 T53 Process AP2-type transcription factors,meristem function
R19 E10 T13 DNA_Part AW-box,AW-box
R2 E1 T63 Development ANT,floral organ growth
R20 E10 T6-0 DNA AW-box,upstream regions of
R21 E11 T13 DNA_Part AW-box,AW-box
R22 E11 T5 DNA AW-box,upstream regions of Pl-PKβ1
R23 E12 T37 Domain AP2 domain,AP2 domain
R24 E12 T35 Product AP2 domain,EREBP-like
R25 E13 T14 DNA_Part 5′-[CnTnG](n)7[CG]-3′,5′-[CnTnG](n)7[CG]-3′
R26 E13 T13 DNA 5′-[CnTnG](n)7[CG]-3′,AW-box
R27 E14 T46 DNA_Part [CnTnG],[CnTnG]
R28 E14 T47 DNA [CnTnG],AW-box
R29 E15 T13 DNA_Part AW-box,AW-box
R3 E2 T66 Agent PLT1,PLT1
R30 E15 T8-0 DNA AW-box,upstream regions of
R31 E16 T13 DNA_Part AW-box,AW-box
R32 E16 T7-0 DNA AW-box,upstream regions of
R33 E17 T1 Functional_Molecule WRI1,WRI1
R34 E17 T2 Molecule WRI1,AW-box
R35 E18 T37 Functional_Molecule AP2 domain,AP2 domain
R36 E18 T34 Molecule AP2 domain,CCGAC
R37 E19 T21 Functional_Molecule AP2 domains,AP2 domains
R38 E19 T23 Molecule AP2 domains,5′-gCAC(A/G)N(A/T)TcCC(a/g)ANG(c/t)-3′
R39 E20 T17 Functional_Molecule WRI1,WRI1
R4 E2 T70-0 Process PLT1,stem cell
R40 E20 T15 Molecule WRI1,AW-box of Pl-PKβ1
R41 E21 T4 Functional_Molecule WRI1,WRI1
R42 E21 T7-0 Molecule WRI1,upstream regions of
R43 E22 T4 Functional_Molecule WRI1,WRI1
R44 E22 T8-0 Molecule WRI1,upstream regions of
R45 E23 T4 Functional_Molecule WRI1,WRI1
R46 E23 T5 Molecule WRI1,upstream regions of Pl-PKβ1
R47 E24 T4 Functional_Molecule WRI1,WRI1
R48 E24 T6-0 Molecule WRI1,upstream regions of
R49 E25 T24 Element1 AW-box,AW-box
R5 E3 T66 Agent PLT1,PLT1
R50 E25 T23 Element2 AW-box,5′-gCAC(A/G)N(A/T)TcCC(a/g)ANG(c/t)-3′
R51 E26 T42 Element1 opposite strand sequence of the ANT-binding consensus sequence,opposite strand sequence of the ANT-binding consensus sequence
R52 E26 T45 Element2 opposite strand sequence of the ANT-binding consensus sequence,5′-(g/a)CnT(t/c)GggA(A/T)n-(T/C)GTGc-3′
R53 E27 T33 Element1 DRE sequences,DRE sequences
R54 E27 T34 Element2 DRE sequences,CCGAC
R55 E28 T66 Element1 PLT1,PLT1
R56 E28 T65 Element2 PLT1,PLETHORA1
R57 E29 T74 Element WRI1,WRI1
R58 E29 T72 Family WRI1,AP-2 type transcription factors
R59 E30 T79 Element WAT2,WAT2
R6 E3 T68 Process PLT1,stem cell specification
R60 E30 T72 Family WAT2,AP-2 type transcription factors
R61 E31 T82 Element ANT,ANT
R62 E31 T72 Family ANT,AP-2 type transcription factors
R63 E32 T77 Element WAT1,WAT1
R64 E32 T72 Family WAT1,AP-2 type transcription factors
R65 E33 T80 Source At1g79700,At1g79700
R66 E33 T79 Product At1g79700,WAT2
R67 E34 T78 Source At1g16060,At1g16060
R68 E34 T77 Product At1g16060,WAT1
R69 E35 T80 Molecule At1g79700,At1g79700
R7 E4 T60 Agent ANT,ANT
R70 E35 T81 Genotype At1g79700,Arabidopsis
R71 E36 T78 Molecule At1g16060,At1g16060
R72 E36 T81 Genotype At1g16060,Arabidopsis
R73 E37 T79 Molecule WAT2,WAT2
R74 E37 T81 Genotype WAT2,Arabidopsis
R75 E38 T77 Molecule WAT1,WAT1
R76 E38 T81 Genotype WAT1,Arabidopsis
R77 E39 T66 Functional_Molecule PLT1,PLT1
R78 E39 T71 Target_Tissue PLT1,root meristem
R79 E40 T67 Functional_Molecule PLT2,PLT2
R8 E4 T61 Development ANT,ovule development
R80 E40 T71 Target_Tissue PLT2,root meristem
R81 E41 T71 Agent root meristem,root meristem
R82 E41 T68 Process root meristem,stem cell specification
R83 E42 T71 Agent root meristem,root meristem
R84 E42 T70-0 Process root meristem,stem cell
R9 E5 T67 Agent PLT2,PLT2