SeeDev-binary@ldeleger:SeeDev-binary-11573014-4
Annnotations
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 8-12 | Protein | denotes | LEC2 |
| T3 | 16-20 | Tissue | denotes | Seed |
| T2 | 16-32 | Development_Phase | denotes | Seed Development |
| T4 | 69-73 | Gene | denotes | LEC2 |
| T6 | 130-136 | Tissue | denotes | embryo |
| T5 | 130-148 | Development_Phase | denotes | embryo development |
| T7 | 190-194 | Protein | denotes | LEC2 |
| E2 | 190-194 | Regulates_Development_Phase | denotes | LEC2 |
| T8 | 217-230 | Development_Phase | denotes | embryogenesis |
| T10 | 248-257 | Tissue | denotes | seedlings |
| T9 | 248-286 | Genotype | denotes | seedlings expressing the 35S∷LEC2 gene |
| E1 | 248-286 | Regulates_Process | denotes | seedlings expressing the 35S∷LEC2 gene |
| T12 | 273-276 | Promoter | denotes | 35S |
| T11 | 273-281 | Gene | denotes | 35S∷LEC2 |
| T13 | 277-281 | Gene | denotes | LEC2 |
| T14-0 | 365-374 | _FRAGMENT | denotes | embryonic |
| T15 | 387-418 | Regulatory_Network | denotes | postgerminative characteristics |
| T14-1 | 403-418 | Regulatory_Network | denotes | characteristics |
| T17 | 420-430 | Tissue | denotes | Cotyledons |
| T16-0 | 420-433 | _FRAGMENT | denotes | Cotyledons of |
| T18 | 440-449 | Tissue | denotes | seedlings |
| T16-1 | 440-465 | Regulatory_Network | denotes | seedlings remained fleshy |
| T19 | 496-501 | Tissue | denotes | roots |
| T20-0 | 496-501 | _FRAGMENT | denotes | roots |
| T22 | 506-516 | Tissue | denotes | hypocotyls |
| T21 | 506-531 | Regulatory_Network | denotes | hypocotyls did not extend |
| T20-1 | 517-531 | Regulatory_Network | denotes | did not extend |
| T23 | 549-572 | Genotype | denotes | ectopic LEC2 expression |
| E7 | 549-572 | Regulates_Process | denotes | ectopic LEC2 expression |
| T24 | 557-561 | Gene | denotes | LEC2 |
| T25 | 577-605 | Regulatory_Network | denotes | extend embryonic development |
| T26 | 584-605 | Development_Phase | denotes | embryonic development |
| T29 | 607-610 | Promoter | denotes | 35S |
| T28 | 607-615 | Gene | denotes | 35S∷LEC2 |
| T27 | 607-625 | Genotype | denotes | 35S∷LEC2 seedlings |
| T30 | 611-615 | Gene | denotes | LEC2 |
| T31 | 616-625 | Tissue | denotes | seedlings |
| T32 | 690-699 | Genotype | denotes | wild type |
| T35 | 889-892 | Promoter | denotes | 35S |
| T34 | 889-897 | Gene | denotes | 35S∷LEC2 |
| T33 | 889-907 | Genotype | denotes | 35S∷LEC2 seedlings |
| T36 | 893-897 | Gene | denotes | LEC2 |
| T37 | 898-907 | Tissue | denotes | seedlings |
| T38 | 921-936 | Tissue | denotes | somatic embryos |
| T39 | 991-1006 | Tissue | denotes | zygotic embryos |
| T40 | 1028-1034 | Tissue | denotes | embryo |
| T41 | 1061-1105 | Regulatory_Network | denotes | establishment of functional apical meristems |
| T42 | 1089-1105 | Tissue | denotes | apical meristems |
| T43 | 1160-1183 | Genotype | denotes | ectopic LEC2 expression |
| E14 | 1160-1183 | Regulates_Process | denotes | ectopic LEC2 expression |
| T44 | 1168-1172 | Gene | denotes | LEC2 |
| T46 | 1250-1264 | Tissue | denotes | somatic embryo |
| T45 | 1250-1274 | Regulatory_Network | denotes | somatic embryo formation |
| T48 | 1312-1316 | Gene | denotes | LEC2 |
| T47 | 1312-1320 | RNA | denotes | LEC2 RNA |
| T49 | 1397-1438 | Regulatory_Network | denotes | ability of somatic embryos to “germinate” |
| T50 | 1408-1423 | Tissue | denotes | somatic embryos |
| T51 | 1503-1512 | Tissue | denotes | plantlets |
| T52-0 | 1514-1557 | _FRAGMENT | denotes | Transgenic seedlings ectopically expressing |
| E4-0 | 1514-1557 | _FRAGMENT | denotes | Transgenic seedlings ectopically expressing |
| T53 | 1525-1534 | Tissue | denotes | seedlings |
| T54 | 1570-1573 | Gene_Family | denotes | LEC |
| T52-1 | 1580-1584 | Genotype | denotes | LEC1 |
| T55 | 1580-1584 | Gene | denotes | LEC1 |
| E4-1 | 1580-1584 | Regulates_Process | denotes | LEC1 |
| T56 | 1591-1616 | Regulatory_Network | denotes | embryonic characteristics |
| T59 | 1660-1663 | Promoter | denotes | 35S |
| T58 | 1660-1668 | Gene | denotes | 35S∷LEC2 |
| T57 | 1660-1690 | Genotype | denotes | 35S∷LEC2 embryo-like seedlings |
| T60 | 1664-1668 | Gene | denotes | LEC2 |
| T61 | 1669-1690 | Tissue | denotes | embryo-like seedlings |
| T62 | 1707-1739 | Genotype | denotes | postembryonic expression of LEC1 |
| E5 | 1707-1739 | Regulates_Development_Phase | denotes | postembryonic expression of LEC1 |
| T63 | 1735-1739 | Gene | denotes | LEC1 |
| T64 | 1764-1785 | Development_Phase | denotes | somatic embryogenesis |
| T65 | 1789-1806 | Genotype | denotes | transgenic plants |
| T68 | 1822-1825 | Promoter | denotes | 35S |
| T67 | 1822-1830 | Gene | denotes | 35S∷LEC2 |
| T66 | 1822-1840 | Genotype | denotes | 35S∷LEC2 seedlings |
| T69 | 1826-1830 | Gene | denotes | LEC2 |
| T70 | 1831-1840 | Tissue | denotes | seedlings |
| T71 | 1851-1865 | Tissue | denotes | somatic embryo |
| T72 | 1896-1900 | Gene | denotes | LEC2 |
| E17 | 1896-1900 | Regulates_Tissue_Development | denotes | LEC2 |
| T73 | 1902-1947 | Genotype | denotes | Recessive mutations in the Arabidopsis PICKLE |
| E10 | 1902-1947 | Regulates_Process | denotes | Recessive mutations in the Arabidopsis PICKLE |
| T74 | 1929-1940 | Genotype | denotes | Arabidopsis |
| T75 | 1941-1947 | Gene | denotes | PICKLE |
| T76 | 1949-1952 | Gene | denotes | PKL |
| E22 | 1949-1952 | Has_Sequence_Identical_To | denotes | PKL |
| T78 | 1971-1992 | Development_Phase | denotes | somatic embryogenesis |
| T77 | 1971-2017 | Regulatory_Network | denotes | somatic embryogenesis in postgerminative roots |
| T79 | 2012-2017 | Tissue | denotes | roots |
| T80 | 2030-2049 | Environmental_Factor | denotes | hormone-free medium |
| E29 | 2030-2049 | Is_Linked_To | denotes | hormone-free medium |
| T81 | 2065-2069 | Gene | denotes | LEC1 |
| T82 | 2090-2095 | Tissue | denotes | roots |
| E25 | 2090-2095 | Regulates_Expression | denotes | roots |
| T83-0 | 2099-2102 | _FRAGMENT | denotes | pkl |
| E33-0 | 2099-2102 | _FRAGMENT | denotes | pkl |
| T84 | 2118-2137 | Genotype | denotes | wild-type seedlings |
| E36 | 2118-2137 | Regulates_Expression | denotes | wild-type seedlings |
| T83-1 | 2128-2137 | Genotype | denotes | seedlings |
| T85 | 2128-2137 | Tissue | denotes | seedlings |
| E33-1 | 2128-2137 | Regulates_Expression | denotes | seedlings |
| T86 | 2195-2198 | Protein | denotes | PKL |
| E24 | 2195-2198 | Regulates_Expression | denotes | PKL |
| E27 | 2195-2198 | Is_Localized_In | denotes | PKL |
| E28 | 2195-2198 | Exists_At_Stage | denotes | PKL |
| T87 | 2224-2228 | Gene | denotes | LEC1 |
| T88 | 2232-2247 | Development_Phase | denotes | postgerminative |
| E35 | 2232-2247 | Regulates_Expression | denotes | postgerminative |
| T89 | 2248-2253 | Tissue | denotes | roots |
| E34 | 2248-2253 | Regulates_Expression | denotes | roots |
| T90 | 2274-2278 | Protein | denotes | LEC1 |
| E12 | 2274-2278 | Regulates_Process | denotes | LEC1 |
| E26 | 2274-2278 | Exists_In_Genotype | denotes | LEC1 |
| T91 | 2307-2331 | Regulatory_Network | denotes | somatic embryo formation |
| T92 | 2315-2321 | Tissue | denotes | embryo |
| T93 | 2335-2338 | Genotype | denotes | pkl |
| E31 | 2335-2338 | Regulates_Process | denotes | pkl |
| T94 | 2387-2391 | Gene | denotes | LEC2 |
| T95 | 2419-2422 | Genotype | denotes | pkl |
| E23 | 2419-2422 | Regulates_Expression | denotes | pkl |
| T96 | 2447-2451 | Gene | denotes | LEC2 |
| E13 | 2447-2451 | Regulates_Process | denotes | LEC2 |
| E15 | 2447-2451 | Regulates_Process | denotes | LEC2 |
| T97 | 2456-2460 | Gene | denotes | LEC1 |
| E8 | 2456-2460 | Regulates_Process | denotes | LEC1 |
| E16 | 2456-2460 | Regulates_Process | denotes | LEC1 |
| T98 | 2464-2492 | Regulatory_Network | denotes | induce somatic embryogenesis |
| T99 | 2479-2492 | Development_Phase | denotes | embryogenesis |
| T100 | 2530-2569 | Regulatory_Network | denotes | establishment of embryogenic competence |
| T101 | 2571-2590 | Regulatory_Network | denotes | Somatic plant cells |
| T102 | 2579-2590 | Tissue | denotes | plant cells |
| T103 | 2641-2662 | Regulatory_Network | denotes | somatic embryogenesis |
| T104 | 2649-2662 | Development_Phase | denotes | embryogenesis |
| T105 | 2672-2694 | Regulatory_Network | denotes | Embryogenic competence |
| T106 | 2715-2730 | Tissue | denotes | culturing cells |
| E18 | 2715-2730 | Regulates_Process | denotes | culturing cells |
| T107 | 2748-2753 | Hormone | denotes | auxin |
| E30 | 2748-2753 | Regulates_Process | denotes | auxin |
| T108 | 2769-2778 | Hormone | denotes | cytokinin |
| E32 | 2769-2778 | Regulates_Process | denotes | cytokinin |
| T109 | 2789-2824 | Regulatory_Network | denotes | completion of somatic embryogenesis |
| T110 | 2811-2824 | Development_Phase | denotes | embryogenesis |
| T111 | 2857-2864 | Environmental_Factor | denotes | hormone |
| T112 | 2869-2873 | Protein | denotes | LEC2 |
| E3 | 2869-2873 | Regulates_Process | denotes | LEC2 |
| T113 | 2878-2882 | Protein | denotes | LEC1 |
| E11 | 2878-2882 | Regulates_Process | denotes | LEC1 |
| T114 | 2930-2967 | Regulatory_Network | denotes | acquisition of embryogenic competence |
| T115 | 2988-3013 | Protein_Family | denotes | LEC transcription factors |
| E9 | 2988-3013 | Regulates_Process | denotes | LEC transcription factors |
| T116 | 3023-3087 | Regulatory_Network | denotes | genes that play roles in the initiation of somatic embryogenesis |
| T117 | 3052-3087 | Development_Phase | denotes | initiation of somatic embryogenesis |
| T118 | 3111-3115 | Gene | denotes | LEC2 |
| T119-0 | 3111-3115 | _FRAGMENT | denotes | LEC2 |
| E20-0 | 3111-3115 | _FRAGMENT | denotes | LEC2 |
| T121 | 3120-3124 | Gene | denotes | LEC1 |
| T120 | 3120-3129 | RNA | denotes | LEC1 RNAs |
| E21 | 3120-3129 | Exists_At_Stage | denotes | LEC1 RNAs |
| T119-1 | 3125-3129 | RNA | denotes | RNAs |
| E20-1 | 3125-3129 | Exists_At_Stage | denotes | RNAs |
| T122 | 3150-3175 | Development_Phase | denotes | earliest embryonic stages |
| T123 | 3255-3290 | Regulatory_Network | denotes | establishing embryogenic competence |
| T124 | 3298-3319 | Development_Phase | denotes | zygotic embryogenesis |
| T125 | 3339-3343 | Protein | denotes | LEC2 |
| T126 | 3348-3352 | Protein | denotes | LEC1 |
| T127 | 3356-3377 | Regulatory_Network | denotes | somatic embryogenesis |
| T128 | 3364-3377 | Development_Phase | denotes | embryogenesis |
| T129 | 3408-3429 | Development_Phase | denotes | zygotic embryogenesis |
| T131-0 | 3475-3503 | _FRAGMENT | denotes | overexpression phenotypes of |
| T130 | 3475-3508 | Genotype | denotes | overexpression phenotypes of LEC2 |
| T132 | 3504-3508 | Gene | denotes | LEC2 |
| T131-1 | 3513-3517 | Genotype | denotes | LEC1 |
| T133 | 3513-3517 | Gene | denotes | LEC1 |
| T134 | 3573-3603 | Development_Phase | denotes | early in zygotic embryogenesis |
| T135 | 3607-3630 | Regulatory_Network | denotes | induce embryo formation |
| T137 | 3614-3620 | Tissue | denotes | embryo |
| T136 | 3614-3630 | Development_Phase | denotes | embryo formation |
| T138 | 3693-3702 | Genotype | denotes | lec1 lec2 |
| T139 | 3718-3754 | Regulatory_Network | denotes | arrest at an earlier embryonic stage |
| T140 | 3731-3754 | Development_Phase | denotes | earlier embryonic stage |
| T141 | 3844-3848 | Gene | denotes | LEC1 |
| E6 | 3844-3848 | Regulates_Process | denotes | LEC1 |
| T142 | 3853-3857 | Gene | denotes | LEC2 |
| E19 | 3853-3857 | Regulates_Process | denotes | LEC2 |
| T143 | 3881-3927 | Regulatory_Network | denotes | induce embryogenic competence in somatic cells |
| T144 | 3914-3927 | Tissue | denotes | somatic cells |
| T145 | 4038-4051 | Genotype | denotes | double mutant |
| T148 | 4133-4136 | Promoter | denotes | 35S |
| T147 | 4133-4141 | Gene | denotes | 35S∷LEC1 |
| T146 | 4133-4151 | Genotype | denotes | 35S∷LEC1 seedlings |
| T149 | 4137-4141 | Gene | denotes | LEC1 |
| T150 | 4142-4151 | Tissue | denotes | seedlings |
| T152 | 4162-4168 | Tissue | denotes | embryo |
| T151 | 4162-4183 | Tissue | denotes | embryo-like seedlings |
| T154 | 4222-4231 | Tissue | denotes | cotyledon |
| T153 | 4222-4243 | Tissue | denotes | cotyledon-like organs |
| T155 | 4286-4292 | Tissue | denotes | leaves |
| T158 | 4312-4315 | Promoter | denotes | 35S |
| T157 | 4312-4320 | Gene | denotes | 35S∷LEC2 |
| T156 | 4312-4342 | Genotype | denotes | 35S∷LEC2 embryo-like seedlings |
| T159 | 4316-4320 | Gene | denotes | LEC2 |
| T161 | 4321-4327 | Tissue | denotes | embryo |
| T160 | 4321-4342 | Tissue | denotes | embryo-like seedlings |
| T162 | 4379-4385 | Tissue | denotes | callus |
| T164 | 4387-4396 | Tissue | denotes | cotyledon |
| T163-0 | 4387-4401 | _FRAGMENT | denotes | cotyledon-like |
| T166 | 4406-4410 | Tissue | denotes | leaf |
| T165 | 4406-4422 | Tissue | denotes | leaf-like organs |
| T163-1 | 4416-4422 | Tissue | denotes | organs |
| T167 | 4438-4453 | Tissue | denotes | somatic embryos |
| T168 | 4461-4465 | Protein | denotes | LEC1 |
| T169 | 4470-4474 | Protein | denotes | LEC2 |
| T171 | 4535-4541 | Tissue | denotes | embryo |
| T170 | 4535-4551 | Regulatory_Network | denotes | embryo formation |
| T172 | 4574-4578 | Protein | denotes | LEC1 |
| T173 | 4583-4587 | Protein | denotes | LEC2 |
| T175 | 4591-4597 | Tissue | denotes | embryo |
| T174 | 4591-4609 | Development_Phase | denotes | embryo development |
| C-E20-0 | E20-1 | E20-0 | _lexicallyChainedTo | RNAs,LEC2 |
| C-E33-0 | E33-1 | E33-0 | _lexicallyChainedTo | seedlings,pkl |
| C-E4-0 | E4-1 | E4-0 | _lexicallyChainedTo | LEC1,Transgenic seedlings ectopically expressing |
| C-T119-0 | T119-1 | T119-0 | _lexicallyChainedTo | RNAs,LEC2 |
| C-T131-0 | T131-1 | T131-0 | _lexicallyChainedTo | LEC1,overexpression phenotypes of |
| C-T14-0 | T14-1 | T14-0 | _lexicallyChainedTo | characteristics,embryonic |
| C-T16-0 | T16-1 | T16-0 | _lexicallyChainedTo | seedlings remained fleshy,Cotyledons of |
| C-T163-0 | T163-1 | T163-0 | _lexicallyChainedTo | organs,cotyledon-like |
| C-T20-0 | T20-1 | T20-0 | _lexicallyChainedTo | did not extend,roots |
| C-T52-0 | T52-1 | T52-0 | _lexicallyChainedTo | LEC1,Transgenic seedlings ectopically expressing |
| C-T83-0 | T83-1 | T83-0 | _lexicallyChainedTo | seedlings,pkl |
| R1 | E1 | T9 | Agent | "seedlings expressing the 35S∷LEC2 gene","seedlings expressing the 35S∷LEC2 gene" |
| R10 | E5 | T64 | Development | "postembryonic expression of LEC1",somatic embryogenesis |
| R11 | E6 | T141 | Agent | LEC1,LEC1 |
| R12 | E6 | T143 | Process | LEC1,induce embryogenic competence in somatic cells |
| R13 | E7 | T23 | Agent | "ectopic LEC2 expression","ectopic LEC2 expression" |
| R14 | E7 | T25 | Process | "ectopic LEC2 expression",extend embryonic development |
| R15 | E8 | T97 | Agent | LEC1,LEC1 |
| R16 | E8 | T100 | Process | LEC1,"establishment of embryogenic competence" |
| R17 | E9 | T115 | Agent | LEC transcription factors,LEC transcription factors |
| R18 | E9 | T116 | Process | LEC transcription factors,"genes that play roles in the initiation of somatic embryogenesis" |
| R19 | E10 | T73 | Agent | "Recessive mutations in the Arabidopsis PICKLE","Recessive mutations in the Arabidopsis PICKLE" |
| R2 | E1 | T14-0 | Process | "seedlings expressing the 35S∷LEC2 gene",embryonic |
| R20 | E10 | T77 | Process | "Recessive mutations in the Arabidopsis PICKLE","somatic embryogenesis in postgerminative roots" |
| R21 | E11 | T113 | Agent | LEC1,LEC1 |
| R22 | E11 | T114 | Process | LEC1,"acquisition of embryogenic competence" |
| R23 | E12 | T90 | Agent | LEC1,LEC1 |
| R24 | E12 | T91 | Process | LEC1,somatic embryo formation |
| R25 | E13 | T96 | Agent | LEC2,LEC2 |
| R26 | E13 | T100 | Process | LEC2,"establishment of embryogenic competence" |
| R27 | E14 | T43 | Agent | ectopic LEC2 expression,ectopic LEC2 expression |
| R28 | E14 | T45 | Process | ectopic LEC2 expression,"somatic embryo formation" |
| R29 | E15 | T96 | Agent | LEC2,LEC2 |
| R3 | E2 | T7 | Agent | LEC2,LEC2 |
| R30 | E15 | T98 | Process | LEC2,"induce somatic embryogenesis" |
| R31 | E16 | T97 | Agent | LEC1,LEC1 |
| R32 | E16 | T98 | Process | LEC1,"induce somatic embryogenesis" |
| R33 | E17 | T72 | Agent | LEC2,LEC2 |
| R34 | E17 | T71 | Target_Tissue | LEC2,somatic embryo |
| R35 | E18 | T106 | Agent | culturing cells,culturing cells |
| R36 | E18 | T105 | Process | culturing cells,"Embryogenic competence" |
| R37 | E19 | T142 | Agent | LEC2,LEC2 |
| R38 | E19 | T143 | Process | LEC2,induce embryogenic competence in somatic cells |
| R39 | E20-0 | T119-0 | Functional_Molecule | LEC2,LEC2 |
| R4 | E2 | T8 | Development | LEC2,embryogenesis |
| R40 | E20-0 | T122 | Development | LEC2,earliest embryonic stages |
| R41 | E21 | T120 | Functional_Molecule | LEC1 RNAs,LEC1 RNAs |
| R42 | E21 | T122 | Development | LEC1 RNAs,earliest embryonic stages |
| R43 | E22 | T76 | Element1 | PKL,PKL |
| R44 | E22 | T75 | Element2 | PKL,PICKLE |
| R45 | E23 | T95 | Agent | pkl,pkl |
| R46 | E23 | T94 | DNA | pkl,LEC2 |
| R47 | E24 | T86 | Agent | PKL,PKL |
| R48 | E24 | T87 | DNA | PKL,LEC1 |
| R49 | E25 | T82 | Agent | roots,roots |
| R5 | E3 | T112 | Agent | LEC2,LEC2 |
| R50 | E25 | T81 | DNA | roots,LEC1 |
| R51 | E26 | T90 | Molecule | LEC1,LEC1 |
| R52 | E26 | T93 | Genotype | LEC1,pkl |
| R53 | E27 | T86 | Functional_Molecule | PKL,PKL |
| R54 | E27 | T89 | Target_Tissue | PKL,roots |
| R55 | E28 | T86 | Functional_Molecule | PKL,PKL |
| R56 | E28 | T88 | Development | PKL,postgerminative |
| R57 | E29 | T80 | Agent1 | hormone-free medium,hormone-free medium |
| R58 | E29 | T73 | Agent2 | hormone-free medium,"Recessive mutations in the Arabidopsis PICKLE" |
| R59 | E30 | T107 | Agent | auxin,auxin |
| R6 | E3 | T114 | Process | LEC2,"acquisition of embryogenic competence" |
| R60 | E30 | T105 | Process | auxin,"Embryogenic competence" |
| R61 | E31 | T93 | Agent | pkl,pkl |
| R62 | E31 | T91 | Process | pkl,somatic embryo formation |
| R63 | E32 | T108 | Agent | cytokinin,cytokinin |
| R64 | E32 | T105 | Process | cytokinin,"Embryogenic competence" |
| R65 | E33-0 | T83-0 | Agent | pkl,pkl |
| R66 | E33-0 | T81 | DNA | pkl,LEC1 |
| R67 | E34 | T89 | Agent | roots,roots |
| R68 | E34 | T87 | DNA | roots,LEC1 |
| R69 | E35 | T88 | Agent | postgerminative,postgerminative |
| R7 | E4-0 | T52-0 | Agent | Transgenic seedlings ectopically expressing,Transgenic seedlings ectopically expressing |
| R70 | E35 | T87 | DNA | postgerminative,LEC1 |
| R71 | E36 | T84 | Agent | wild-type seedlings,wild-type seedlings |
| R72 | E36 | T81 | DNA | wild-type seedlings,LEC1 |
| R8 | E4-0 | T56 | Process | Transgenic seedlings ectopically expressing,embryonic characteristics |
| R9 | E5 | T62 | Agent | "postembryonic expression of LEC1","postembryonic expression of LEC1" |