bionlp-ost-19-BB-rel-train  

BB-rel@ldeleger:BB-rel-24678646 / 654-1897 JSONTXT

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Id Subject Object Predicate Lexical cue
T4 0-1243 Paragraph denotes For MRSA, we screened 982 articles, identified 16 eligible studies (13 observational studies and 3 randomized controlled trials), for a total of 1,804 non-duplicated subjects. For VRE, we screened 284 articles, identified 13 eligible studies (12 observational studies and 1 randomized controlled trial), for a total of 1,936 non-duplicated subjects. Studies reported varying definitions of clearance of colonization; no study reported time of initial colonization. Studies varied in the frequency of sampling, assays used for sampling, and follow-up period. The median duration of total follow-up was 38 weeks for MRSA and 25 weeks for VRE. Based on pooled analyses, the model-estimated median time to clearance was 88 weeks after documented colonization for MRSA-colonized patients and 26 weeks for VRE-colonized patients. In a secondary analysis, clearance rates for MRSA and VRE were compared by restricting the duration of follow-up for the MRSA studies to the maximum observed time point for VRE studies (43 weeks). With this restriction, the model-fitted median time to documented clearance for MRSA would occur at 41 weeks after documented colonization, demonstrating the sensitivity of the pooled estimate to length of study follow-up.
T27 4-8 Phenotype denotes MRSA
T28 4-8 Microorganism denotes MRSA
E13 4-8 Exhibits denotes MRSA
T29 180-183 Phenotype denotes VRE
T30 180-183 Microorganism denotes VRE
E14 180-183 Exhibits denotes VRE
T31 614-618 Phenotype denotes MRSA
T32 614-618 Microorganism denotes MRSA
E15 614-618 Exhibits denotes MRSA
T33 636-639 Phenotype denotes VRE
T34 636-639 Microorganism denotes VRE
E16 636-639 Exhibits denotes VRE
T35 759-763 Phenotype denotes MRSA
T36 759-763 Microorganism denotes MRSA
E18 759-763 Lives_In denotes MRSA
E17 759-763 Exhibits denotes MRSA
T37 759-782 Habitat denotes MRSA-colonized patients
T38 800-803 Phenotype denotes VRE
T39 800-803 Microorganism denotes VRE
E20 800-803 Lives_In denotes VRE
E19 800-803 Exhibits denotes VRE
T40 800-822 Habitat denotes VRE-colonized patients
T41 869-873 Phenotype denotes MRSA
T42 869-873 Microorganism denotes MRSA
E21 869-873 Exhibits denotes MRSA
T43 878-881 Phenotype denotes VRE
T44 878-881 Microorganism denotes VRE
E22 878-881 Exhibits denotes VRE
T45 945-949 Phenotype denotes MRSA
T46 945-949 Microorganism denotes MRSA
E23 945-949 Exhibits denotes MRSA
T47 997-1000 Phenotype denotes VRE
T48 997-1000 Microorganism denotes VRE
T49 1101-1105 Phenotype denotes MRSA
T50 1101-1105 Microorganism denotes MRSA
E24 1101-1105 Exhibits denotes MRSA
R25 E13 T28 Microorganism MRSA,MRSA
R26 E13 T27 Property MRSA,MRSA
R27 E14 T30 Microorganism VRE,VRE
R28 E14 T29 Property VRE,VRE
R29 E15 T32 Microorganism MRSA,MRSA
R30 E15 T31 Property MRSA,MRSA
R31 E16 T34 Microorganism VRE,VRE
R32 E16 T33 Property VRE,VRE
R33 E18 T36 Microorganism MRSA,MRSA
R34 E18 T37 Location MRSA,MRSA-colonized patients
R35 E17 T36 Microorganism MRSA,MRSA
R36 E17 T35 Property MRSA,MRSA
R37 E20 T39 Microorganism VRE,VRE
R38 E20 T40 Location VRE,VRE-colonized patients
R39 E19 T39 Microorganism VRE,VRE
R40 E19 T38 Property VRE,VRE
R41 E21 T42 Microorganism MRSA,MRSA
R42 E21 T41 Property MRSA,MRSA
R43 E22 T44 Microorganism VRE,VRE
R44 E22 T43 Property VRE,VRE
R45 E23 T46 Microorganism MRSA,MRSA
R46 E23 T45 Property MRSA,MRSA
R47 E24 T50 Microorganism MRSA,MRSA
R48 E24 T49 Property MRSA,MRSA