BB-norm+ner@ldeleger:BB-norm+ner-19552770
Annnotations
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue | NCBI_Taxonomy | OntoBiotope |
---|---|---|---|---|---|---|
T1 | 0-73 | Title | denotes | Prevalence of thermotolerant Campylobacter in partridges (Perdix perdix). | ||
T6 | 14-28 | Phenotype | denotes | thermotolerant | OBT:000453 | |
T7 | 29-42 | Microorganism | denotes | Campylobacter | 194 | |
T8 | 46-56 | Habitat | denotes | partridges | OBT:003066 | |
T9 | 58-71 | Habitat | denotes | Perdix perdix | OBT:003066 | |
T2 | 74-206 | Paragraph | denotes | To estimate the prevalence of thermotolerant Campylobacter spp. in commercially reared partridges (Perdix perdix) in southern Italy. | ||
T10 | 104-118 | Phenotype | denotes | thermotolerant | OBT:000453 | |
T11 | 119-137 | Microorganism | denotes | Campylobacter spp. | 194 | |
T12 | 141-171 | Habitat | denotes | commercially reared partridges | OBT:002726|OBT:003066 | |
T13 | 173-186 | Habitat | denotes | Perdix perdix | OBT:003066 | |
T15 | 207-214 | Habitat | denotes | Cloacal | OBT:001488 | |
T14 | 207-234 | Habitat | denotes | Cloacal swabs of partridges | OBT:001737 | |
T3 | 207-1018 | Paragraph | denotes | Cloacal swabs of partridges (n = 240), equally distributed between male and female birds, from a game bird farm located in the Southern Italy were examined for the prevalence of thermotolerant Campylobacter spp. The samples were processed in order to detect thermotolerant Campylobacter spp. by culture methods. The positive samples were then confirmed by multiplex polymerase chain reaction. Thermotolerant Campylobacter spp. were isolated from 118 (49.2%) of the 240 cloacal swabs examined. As proved by PCR, 100% of the strains were identified as Campylobacter coli (118/118), and 15 (12.7%) out of the 118 positive samples were also positive for Campylobacter jejuni. In contrast, Campylobacter lari was not identified. Adult partridges showed a significantly higher prevalence (P < 0.05) than younger ones. | ||
T16 | 224-234 | Habitat | denotes | partridges | OBT:002726|OBT:003066 | |
T17-0 | 274-278 | _FRAGMENT | denotes | male | OBT:001192|OBT:003066|OBT:002726 | |
T18 | 283-295 | Habitat | denotes | female birds | OBT:002726|OBT:001103|OBT:003066 | |
T17-1 | 290-295 | Habitat | denotes | birds | ||
T19 | 304-313 | Habitat | denotes | game bird | OBT:001446 | |
T20 | 304-318 | Habitat | denotes | game bird farm | OBT:000194 | |
T21 | 385-399 | Phenotype | denotes | thermotolerant | OBT:000453 | |
T22 | 400-418 | Microorganism | denotes | Campylobacter spp. | 194 | |
T23 | 465-479 | Phenotype | denotes | thermotolerant | OBT:000453 | |
T24 | 480-498 | Microorganism | denotes | Campylobacter spp. | 194 | |
T25 | 600-614 | Phenotype | denotes | Thermotolerant | OBT:000453 | |
T26 | 615-633 | Microorganism | denotes | Campylobacter spp. | 194 | |
T27 | 676-689 | Habitat | denotes | cloacal swabs | OBT:001737 | |
T28 | 757-775 | Microorganism | denotes | Campylobacter coli | 195 | |
T29 | 857-877 | Microorganism | denotes | Campylobacter jejuni | 197 | |
T30 | 892-910 | Microorganism | denotes | Campylobacter lari | 201 | |
T31 | 931-947 | Habitat | denotes | Adult partridges | OBT:001395|OBT:002726|OBT:003066 | |
T32 | 1005-1017 | Habitat | denotes | younger ones | OBT:001849|OBT:003066|OBT:002726 | |
T4 | 1019-1177 | Paragraph | denotes | These results reinforce the assumption that game birds may be considered as potential carriers of Campylobacter spp. for human being and other animal species. | ||
T33 | 1063-1073 | Habitat | denotes | game birds | OBT:001446 | |
T34 | 1117-1135 | Microorganism | denotes | Campylobacter spp. | 194 | |
T35 | 1140-1151 | Habitat | denotes | human being | OBT:002488 | |
T36 | 1162-1176 | Habitat | denotes | animal species | OBT:000193 | |
T5 | 1178-1379 | Paragraph | denotes | Although an earlier 1986 publication described the prevalence of Campylobacter coli in commercially reared partridges, this is the first report to confirm the species of Campylobacter using a PCR test. | ||
T37 | 1243-1261 | Microorganism | denotes | Campylobacter coli | 195 | |
T38 | 1265-1295 | Habitat | denotes | commercially reared partridges | OBT:003066|OBT:002726 | |
T39 | 1348-1361 | Microorganism | denotes | Campylobacter | 194 | |
C-T17-0 | T17-1 | T17-0 | _lexicallyChainedTo | birds,male |