LitCovid-sentences  

PMC:7640975 / 26546-34367 JSONTXT 10 Projects

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Id Subject Object Predicate Lexical cue
T151 0-122 Sentence denotes protein name Uniprot accession no. log2 ratios (infection/control) peptides sequence coverage (%) p-values functions
T152 123-167 Sentence denotes Upregulated proteins in PDCoV-infected cells
T153 168-292 Sentence denotes ISG15 ubiqutin-like modifier I3LU39 1.24 18 30.1 3.62 × 10–06 RIG-1/MDA5 mediated induction of IFN-alpha/beta pathways
T154 293-389 Sentence denotes Interferon-stimulated protein 60 F1SCY2 1.09 5 14.6 3.51 × 10–05 Defense response to virus
T155 390-479 Sentence denotes 2′-5′ oligoadenylates synthetase 1, OAS1 F1RJN6 0.81 2 3.1 0.0001 Antiviral protein
T156 480-601 Sentence denotes Radical S-adenosyl methionine domain-containing protein 2 F1S9L2 0.70 6 13.8 1.60 × 10–05 Defense response to virus
T157 602-739 Sentence denotes Interferon induced protein with tetratricopeptide repeats 1, IFIT1 K7GN56 0.70 5 9.6 0.0002 Regulation of defense response to virus
T158 740-822 Sentence denotes Family with sequence similarity 8 member A1 F1RUH9 0.69 1 2.2 0.0103 unknown
T159 823-886 Sentence denotes uncharacterized protein I3LH89 0.658 1 4.7 0.0074 unknown
T160 887-1016 Sentence denotes Interferon-induced GTP-binding protein Mx1 K7GKN2 0.58 2 2.0 0.0013 GTPase activity; cellular response to type I interferon
T161 1017-1098 Sentence denotes Nucleoporin 37 (NUP37) F1SRJ4 0.57 1 5.2 0.0016 Transporting macromolecules
T162 1099-1221 Sentence denotes Nuclear transcription factor Y submit beta (NFYB) F1SG36 0.55 2 6.3 0.0013 DNA-binding transcription factor activity
T163 1222-1336 Sentence denotes DNA excision repair protein ERCC-6-like isoform a (ERCC6L) I3LFY4 0.45 1 0.8 0.0496 DNA translocase activity
T164 1337-1447 Sentence denotes Collagen type IV alpha 1 chain F1RLM1 0.45 1 0.6 0.0153 Component of glomerular basement membranes (GBM)
T165 1448-1518 Sentence denotes Ribouclease T2 F1SBX8 0.35 2 4.4 0.0004 Ribinuclease T2 activity
T166 1519-1569 Sentence denotes MRPL32 I3LTC4 0.34 1 11.7 0.0472 translation
T167 1570-1631 Sentence denotes Phostensin Q767M0 0.32 3 6.8 0.0047 Phosphatase binding
T168 1632-1711 Sentence denotes Bridging integrator 1 F1RXZ6 0.32 7 22.7 0.0012 Regulation of endocytosis
T169 1712-1811 Sentence denotes Terpene cyclase/mutase family member I3L7C2 0.29 10 16.7 0.0012 Beta-amyrin synthase activity
T170 1812-1878 Sentence denotes Secretagogin (SCGN) Q06A97 0.28 2 9.4 0.0214 Calcium binding
T171 1879-2017 Sentence denotes Interleukin 13 receptor subunit alpha 2 K7GSC6 0.28 2 14.6 0.0370 Obsolete signal transducer activity and cytokine receptor activity
T172 2018-2109 Sentence denotes FOS-like 1 (FOSL1) F1RU26 0.28 1 6.2 0.0214 DNA-binding transcription factor activity
T173 2110-2204 Sentence denotes Prolactin regulatory element binding F1SED4 0.27 9 10.1 0.0229 GTPase activator activity
T174 2205-2316 Sentence denotes CDK-activating kinase assembly factor MAT1 (MNAT1) F6Q8T7 0.27 1 6.4 0.0076 DNA-dependent ATPase activity
T175 2317-2391 Sentence denotes Intraflagellar transport 81 F1RNN4 0.26 1 3.7 0.0033 Tubulin binding
T176 2392-2438 Sentence denotes Downregulated proteins in PDCoV-infected cells
T177 2439-2541 Sentence denotes Very low density lipoprotein receptor (VLDLR) E7CXS1 –0.27 21 22.8 0.0001 Apolipoprotein binding
T178 2542-2597 Sentence denotes uncharacterized I3LFU8 –0.27 3 5.6 0.0218 unknown
T179 2598-2668 Sentence denotes Myeloid leukemia factor 2 F1SLT1 –0.28 6 15.8 0.0488 DNA-binding
T180 2669-2772 Sentence denotes Helicase-like transcription factor (HLTF) I3LM88 –0.28 1 1.9 0.0254 DNA-dependent ATPase activity
T181 2773-2875 Sentence denotes Ras association domain family member 6 F1RUL8 –0.29 2 5.5 0.0011 Regulation of apoptotic process
T182 2876-2984 Sentence denotes Nucleoside diphosphate kinase 7 (NME7) F1RPV8 –0.29 3 8.0 0.0279 Synthesis of nucleoside triphosphates
T183 2985-3116 Sentence denotes Bromodomain adjacent to zinc finger domain 2A (BAZ2A) F1SLA2 –0.29 1 1.2 0.0189 Component of the nucleolar remodeling complex
T184 3117-3194 Sentence denotes BMP2 inducible kinase I3LT15 –0.29 1 2.8 0.0319 Protein kinase activity
T185 3195-3266 Sentence denotes RNA helicase (DDX55) F1RFL5 –0.29 1 1.5 0.0274 Catalytic activity
T186 3267-3325 Sentence denotes TMEM55B F1S8H7 –0.29 1 3.9 0.0445 Catalytic activity
T187 3326-3433 Sentence denotes Chromatin assembly factor 1 subunit A (CHAF1A) F1S7L7 –0.29 4 5.3 0.0252 Chromo shadow domain binding
T188 3434-3575 Sentence denotes RNA polymerase II subunit A C-terminal domain phosphatase (CTDP1) F1RWS7 –0.29 2 5.5 0.0123 Promoting the activity of RNA polymerase II
T189 3576-3632 Sentence denotes uncharacterized I3LIB8 –0.30 2 14.7 0.0373 unknown
T190 3633-3747 Sentence denotes Intraflagellar transport 172 I3LPC6 –0.30 1 0.69 0.0383 Negative regulation of epithelial cell proliferation
T191 3748-3844 Sentence denotes Myocyte enhancer factor 2D (MEF2D) F1RP31 –0.30 1 1.9 0.0418 Protein dimerization activity
T192 3845-3949 Sentence denotes Poly(ADP-ribose) glycohydrolase F1SDW4 –0.31 1 1.3 0.0355 Poly(ADP-ribose) glycohydrolase activity
T193 3950-4057 Sentence denotes Mitogen-activated protein kinase 4 F1STG5 –0.31 4 4.9 0.0233 Protein serine/threonine kinase activity
T194 4058-4169 Sentence denotes Anaphase promoting complex subunit 7 (ANAPC7) I3L7Q8 –0.31 4 7.9 0.0218 Ubiquitin protein ligase activity
T195 4170-4266 Sentence denotes Transmembrane protein 45A F1SKZ6 –0.31 1 3.6 0.0191 Modulates cancer cell chemosensitivity
T196 4267-4356 Sentence denotes Katanin p60 ATPase-containing subunit A1 I3LVP8 –0.32 2 32.1 0.0181 ATPase activity
T197 4357-4444 Sentence denotes Ubiquitin associated protein 2 (UBAP2) F1SEA5 –0.32 1 1.7 0.0237 Cadherin binding
T198 4445-4580 Sentence denotes Ribosomal RNA adenine dimethylase domain containing 1 F1RHJ0 –0.32 1 2.3 0.0391 rRNA (adenine-N6,N6)-dimethyltransferase activity
T199 4581-4677 Sentence denotes Lemur tyrosine kinase 2 F1RFL2 –0.32 1 1.0 0.0104 Protein serine/threonine kinase activity
T200 4678-4818 Sentence denotes Poly(ADP-ribose) polymerase family member 10 F1RSK9 –0.32 1 1.8 0.0182 K63-linked polyubiquitin modification-dependent protein binding
T201 4819-4914 Sentence denotes CDK9 C9E1C9 –0.32 4 11.0 0.0183 Cyclin-dependent protein serine/threonine kinase activity
T202 4915-5005 Sentence denotes Cystatin C Q0Z8R0 –0.33 2 17.1 0.0282 Cysteine-type endopeptidase inhibitor activity
T203 5006-5127 Sentence denotes Cyclin and CBS domain divalent metal cation transport mediator 2 F1S849 –0.33 1 1.1 0.0173 Adenylnucleotide binding
T204 5128-5232 Sentence denotes Protein-serine/threonine kinase F1S069 –0.34 4 8.2 0.0247 Protein serine/threonine kinase activity
T205 5233-5336 Sentence denotes Aamy domain-containing protein F1S5K2 –0.34 1 2.5 0.0390 Catalytic activity; amino acid transport
T206 5337-5458 Sentence denotes GATOR complex protein WDR24 I3LF05 –0.34 1 1.4 0.0368 Regulation of autophagy; positive regulation of TOR signaling
T207 5459-5563 Sentence denotes CD109 antigen isoform 1 preproprotein K7GKY0 –0.35 18 12.9 0.0105 Endopeptidase inhibitor activity
T208 5564-5668 Sentence denotes Nonspecific serine/threonine protein kinase (AKT2) G9BWQ2 –0.35 7 12.0 0.0310 Transferase activity
T209 5669-5765 Sentence denotes DNA polymerase delta interacting protein 3 (POLDIP3) F1SJQ4 –0.35 3 3.8 0.0287 RNA binding
T210 5766-5855 Sentence denotes Exostosin-like glycosyltransferase 2 F1S568 –0.35 1 3.3 0.0215 Transferase activity
T211 5856-5987 Sentence denotes 4F5 domain-containing protein I3LS25 –0.36 9 42.4 0.0015 Positive regulator of amyloid protein aggregation and proteotoxicity
T212 5988-6123 Sentence denotes Integrator complex subunit 4 (INTS4) F1STY6 –0.37 3 2.4 0.0429 Involved in the small nuclear RNAs (snRNA) U1 and U2 transcription
T213 6124-6205 Sentence denotes Smoothelin-like 2 F1RGN8 –0.37 1 2.7 0.0119 Actin cytoskeleton organization
T214 6206-6307 Sentence denotes Elongation of very long chain fatty acids protein I3L7S8 –0.39 1 21.6 0.0444 Catalytic activity
T215 6308-6363 Sentence denotes uncharacterized I3LBD1 –0.40 1 7.4 0.0085 unknown
T216 6364-6460 Sentence denotes Secretory carrier-associated membrane protein F1SJ46 –0.41 7 13.1 0.0144 Protein transport
T217 6461-6523 Sentence denotes Cadherin 6 F1SP42 –0.42 3 3.7 0.0122 Calcium ion binding
T218 6524-6606 Sentence denotes Superoxide dismutase I3LUD1 –0.43 2 4.9 0.0139 Superoxide dismutase activity
T219 6607-6736 Sentence denotes Probable ribosome biogenesis protein C16orf42 homologue (SMARCA2) F1RFZ6 –0.44 1 4.4 0.0470 Involved in ribosome biogenesis
T220 6737-6876 Sentence denotes Protein zyg-11 homologue B F1S6I1 –0.45 1 3.4 0.0030 Positive regulation of proteasomal ubiquitin-dependent protein catabolic process
T221 6877-6969 Sentence denotes BCL2 interacting protein 3 I3LDJ9 –0.45 2 6.6 0.0009 Protein homodimerization activity
T222 6970-7079 Sentence denotes Alpha-(1,6)-fucosyltransferase (FUT8) F1SA54 –0.47 1 3.3 0.0492 Alpha-(1→6)-fucosyltransferase activity
T223 7080-7178 Sentence denotes Signal peptide peptidase-like 2B F1S8G9 –0.52 2 1.9 0.0190 Protein homodimerization activity
T224 7179-7265 Sentence denotes INTS3 and NABP interacting protein (INTS4) F1SNA6 –0.54 5 12.5 0.0006 DNA repair
T225 7266-7360 Sentence denotes Trypsin domain containing 1 F1SUE6 –0.55 1 1.8 0.0215 Serine-type endopeptidase activity
T226 7361-7481 Sentence denotes UDP-glucose glycoprotein glucosyltransferase 2 F1RP50 –0.62 2 2.3 0.0320 Glycoprotein glucosyltransferase activity
T227 7482-7573 Sentence denotes Phosphatidylglycerophosphate synthase 1 I3LN95 –0.62 1 2.7 0.0440 Calcium ion binding
T228 7574-7643 Sentence denotes Metallothionein-2A P79379 –0.63 9 32.8 0.0017 Metal ion binding
T229 7644-7699 Sentence denotes uncharacterized I3LNY1 –0.66 1 6.5 0.0246 unknown
T230 7700-7764 Sentence denotes Formin-like 1 I3LH80 –0.83 1 1.8 0.0191 Rho GTPase binding
T231 7765-7821 Sentence denotes uncharacterized K7GL96 –1.13 1 10.9 0.0412 unknown