Id |
Subject |
Object |
Predicate |
Lexical cue |
T146 |
0-10 |
Sentence |
denotes |
Discussion |
T147 |
11-91 |
Sentence |
denotes |
The theory of TCM has been formed and developed for thousands of years in China. |
T148 |
92-216 |
Sentence |
denotes |
In China, TCM has a good therapeutic effect on COVID-19, which has been written into the diagnosis and treatment guidelines. |
T149 |
217-358 |
Sentence |
denotes |
The guideline points out that the combination of traditional Chinese and western medicine should be strengthened in the treatment process 34. |
T150 |
359-515 |
Sentence |
denotes |
SFJDC is a traditional Chinese medicine, mainly used to treat upper respiratory tract infections, such as influenza, sore throat, mumps, streptococcus, etc. |
T151 |
516-519 |
Sentence |
denotes |
21. |
T152 |
520-593 |
Sentence |
denotes |
Now, SFJDC has become an effective drug for the treatment of COVID-19 35. |
T153 |
594-728 |
Sentence |
denotes |
In recent years, the research on Chinese medicine prescriptions has developed to the level of effective parts, components, components. |
T154 |
729-856 |
Sentence |
denotes |
Network pharmacology can better understand and demonstrate the interaction between multi-component multi-target and disease 36. |
T155 |
857-997 |
Sentence |
denotes |
This study aims to analyze the active components and potential mechanism of SFJDC in the treatment of COVID-19 through network pharmacology. |
T156 |
998-1115 |
Sentence |
denotes |
In the present study, the ingredients-targets network of SFJDC was constructed using 110 ingredients and 120 targets. |
T157 |
1116-1216 |
Sentence |
denotes |
The network contained 117 nodes and 419 edges which indicated the compound-target genes interaction. |
T158 |
1217-1400 |
Sentence |
denotes |
The results showed that most compounds of SFJDC were affected by multiple target genes, such as Wogonin, licochalcone a and acacetin acted on 42, 30 and 23 target genes, respectively. |
T159 |
1401-1473 |
Sentence |
denotes |
Various compounds of SFJDC may have the same targets to achieve synergy. |
T160 |
1474-1640 |
Sentence |
denotes |
Wogonin, a naturally occurring flavonoid, has been shown to multi-activity, such as anti-inflammatory, anti-fibrosis, anti-cancer and chondroprotective properties 37. |
T161 |
1641-1731 |
Sentence |
denotes |
Study showed that wogonin had an anti-infulenza activity by modulation of AMPK pathway 38. |
T162 |
1732-1889 |
Sentence |
denotes |
Licochalcone a, a flavonoid extracted from licorice toot, was known for its anti-inflammatory, anti-cancer, anti-oxidative and anti-bacterial bioactivity 39. |
T163 |
1890-1991 |
Sentence |
denotes |
Acacetin, a flavone compound, played an important role in anti-inflammatory and anti-peroxidative 40. |
T164 |
1992-2067 |
Sentence |
denotes |
In addition, they have high OB and acacetin from 2 herbs (PR, IR) of SFJDC. |
T165 |
2068-2173 |
Sentence |
denotes |
The three main ingredients were anti-inflammatory and COVID-19 caused by a series of inflammatory storms. |
T166 |
2174-2258 |
Sentence |
denotes |
Hence, they might be the crucial effective compounds of SFJDC according the network. |
T167 |
2259-2370 |
Sentence |
denotes |
PPI network of SFJDC against NCP were visualized using Cytoscape software to obtain the candidate target genes. |
T168 |
2371-2504 |
Sentence |
denotes |
In order to obtain the more accurate genes, two parameters including DC and BC were used to screen nodes and structure a new network. |
T169 |
2505-2616 |
Sentence |
denotes |
169 genes were eventually identified for SFJDC against NCP including 156 other human genes and 13 target genes. |
T170 |
2617-2701 |
Sentence |
denotes |
Twenty-three candidate genes (CGs) were identified by using the VennDiagram package. |
T171 |
2702-2760 |
Sentence |
denotes |
CGs were enriched in BP, CC, MF by GO enrichment analysis. |
T172 |
2761-2952 |
Sentence |
denotes |
Based on GO terms data, we found that some terms were response to lipopolysaccharide or bacterial origin, membrane raft, membrane microdomain, BH domain binding and cytokine receptor binding. |
T173 |
2953-3156 |
Sentence |
denotes |
COVID-19 infections leaded to a strong immune response and inflammatory storm in which a large number of cytokines were activated, so SFJDC might regulate COVID-19 through the above biological processes. |
T174 |
3157-3236 |
Sentence |
denotes |
SFJDC, as a TCM formula, has multi-component, multi-target-gene, multi-pathway. |
T175 |
3237-3305 |
Sentence |
denotes |
In the present study, 110 KEGG pathways were significantly enriched. |
T176 |
3306-3679 |
Sentence |
denotes |
Seven of the top 20 pathways were associated with viral infection including Kaposi sarcoma-associated herpesvirus infection, Human cytomegalovirus infection, Hepatitis B, Influenza A, Epstein-Barr virus infection, Human immunodeficiency virus 1 infection and Measles, and three were associated with lung disease contained tuberculosis, pertussis and small cell lung cancer. |
T177 |
3680-3866 |
Sentence |
denotes |
Multiple targets of SFJDC may also inhibit the activation of cytokines and reduce inflammation by regulating cytokine pathways, such as IL-17 signaling pathway and TNF signaling pathway. |
T178 |
3867-3942 |
Sentence |
denotes |
In this study, we obtained 20 functional annotation clusters through DAVID. |
T179 |
3943-4139 |
Sentence |
denotes |
Annotation Cluster1 including Asthma, Bronchiolitis Viral, Respiratory Syncytial Virus Infections, respiratory syncytial virus bronchiolitis were lung related diseases and Virus infection disease. |
T180 |
4140-4210 |
Sentence |
denotes |
Gene-pathway network was constructed to the core and key target genes. |
T181 |
4211-4285 |
Sentence |
denotes |
The network showed that RELA had largest degree, was the core target gene. |
T182 |
4286-4381 |
Sentence |
denotes |
Other top five genes such as MAPK1, MAPK14, CASP3, CASP8 and IL6 might be the key target genes. |
T183 |
4382-4565 |
Sentence |
denotes |
The pathophysiological process of Severe Acute Respiratory Syndrome-Coronavirus-2 (SARS-COV-2) infection is similar to that of SARS-CoV infection, with a strong inflammatory response. |
T184 |
4566-4896 |
Sentence |
denotes |
The SARS-COV-2 virus mainly targets respiratory epithelial cells, alveolar epithelial cells, vascular endothelial cells and pulmonary macrophages, all of which express Angiotensin converting enzyme 2 (ACE2) receptor, triggering the generation of pro- inflammatory cytokines and chemokines (including IL-6, TNF, IL-10 and MCP1) 41. |
T185 |
4897-5099 |
Sentence |
denotes |
The NF-kB family member RELA is a widely expressed and effective transcriptional activator that activates the expression of many inflammatory through exposure to pathogens and inflammatory cytokines 42. |
T186 |
5100-5161 |
Sentence |
denotes |
RELA may play an important role in the infection of COVID-19. |
T187 |
5162-5369 |
Sentence |
denotes |
MAPK1 and MAPK14 are members of the MAPK family, which can regulate multiple cellular processes, such as response to oxidative stress, anti-inflammatory, immune response, apoptosis and cell proliferation 43. |
T188 |
5370-5606 |
Sentence |
denotes |
Joseph et al showed SASR-CoV-2 could induce severe inflammation by directly activating p38 MAPK pathway and many p38 MAPK inhibitors are in the clinical stage and should be considered for clinical trial for severe COVID-19 infection 44. |
T189 |
5607-5812 |
Sentence |
denotes |
CASP3 and CASP8, a family of cysteine-dependent proteases, play an important role in these events through activation of other apoptotic proteins mediated by proteolysis and cleavage of nuclear proteins 45. |
T190 |
5813-5945 |
Sentence |
denotes |
In Krahling's study, infection of 293/ACE2 cells with SARS-CoV activated apoptosis-associated events, such as caspase3, caspase 846. |
T191 |
5946-6080 |
Sentence |
denotes |
Therefore, we conclude that CASP3 and CASP8 may be activated and play an important role in the pathophysiological process of COVID-19. |
T192 |
6081-6151 |
Sentence |
denotes |
Higher plasma level of IL-6 was found in ICU patients with COVID-1947. |
T193 |
6152-6362 |
Sentence |
denotes |
Tocilizumab, a recombinant humanized anti-human IL-6 receptor monoclonal antibody, improved the clinical outcome in 20 severe and critical COVID-19 patients and is an effective treatment to reduce mortality 48. |
T194 |
6363-6449 |
Sentence |
denotes |
It has been clinically confirmed that SFJDC is effective in the treatment of COVID-19. |
T195 |
6450-6636 |
Sentence |
denotes |
Wang et al shown that conventional treatment combined with SFJDC treatment for 4 cases of COVID-19 patients could significantly improve symptoms and promote viral negative conversion 49. |
T196 |
6637-6875 |
Sentence |
denotes |
Another study including 70 COVID-19 patients found that SFJDC combined with Arbidol for COVID-19 compared with single using Arbidol could significantly shorten the time of clinical symptoms improvement and COVID-19 negative conversion 50. |
T197 |
6876-6985 |
Sentence |
denotes |
To summarise, the compound and targets of SFJDC were systematically studied by applying network pharmacology. |
T198 |
6986-7070 |
Sentence |
denotes |
Wogonin, licochalcone a and acacetin regulated the most targets associated with NCP. |
T199 |
7071-7195 |
Sentence |
denotes |
RELA, MAPK1, MAPK14, CASP3, CASP8 and IL6 were the core and key genes in the gene-network of SFJDC for the treatment of NCP. |
T200 |
7196-7338 |
Sentence |
denotes |
SFJDC regulated novel coronavirus pneumonia by multi-compound and multi-target, which provided theoretical support for SFJDC against COVID-19. |
T201 |
7339-7400 |
Sentence |
denotes |
More mechanism and roles require further clinical validation. |