PMC:7417114 / 23034-30357 JSONTXT 12 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T134 0-130 Sentence denotes Several kinase inhibitors have been proposed to exhibit antiviral activity based on their ability to potently target AAK1 and GAK.
T135 131-362 Sentence denotes One drug, the FDA-approved janus kinase (JAK) inhibitor, baricitinib, was identified- in response to the SARS-CoV-2 outbreak- as a possible treatment for COVID-19 by investigators from BenevolentAl and Imperial College London (45).
T136 363-486 Sentence denotes Baricitinib was proposed to potentially reduce infection, based on the drug’s ability to inhibit AAK1 and bind to GAK (45).
T137 487-838 Sentence denotes It has been argued that the therapeutic dosing and low plasma protein binding of baricitinib, in contrast to the JAK kinase inhibitors, ruxolitinib and fedratinib, may make baricitinib more likely to inhibit AAK1 at therapeutically effective and tolerated doses and potentially reduce viral infectivity in patients than the other inhibitors (45) (47).
T138 839-909 Sentence denotes AAK1 and GAK binding potency for these inhibitors is shown in Table 2.
T139 910-918 Sentence denotes Table 2.
T140 919-950 Sentence denotes FDA approved kinase inhibitors:
T141 951-990 Sentence denotes Kinase targets and respiratory benefits
T142 991-1216 Sentence denotes Kinase Inhibitor (brand name)(indication; main therapeutic targets) Selected Kinase Target Affinity(antiviral and pulmonary benefit)KINOMEscan(kd<100 nM) Anti-inflammatory activity, cytokine suppression, antifibrotic activity
T143 1217-1237 Sentence denotes Midostaurin (Rydapt)
T144 1238-1342 Sentence denotes (acute myeloid leukemia, systemic mastocytosis; multi-targeted; FLT3-ITD, D816V-c-KIT) AAK1, JAK2, JAK3,
T145 1343-1358 Sentence denotes Kd KIT (220nM),
T146 1359-1373 Sentence denotes Kd RET (350nM)
T147 1374-1427 Sentence denotes (48) Anti-inflammatory and cytokine suppression (107)
T148 1428-1440 Sentence denotes Lestaurtinib
T149 1441-1574 Sentence denotes (orphan drug status, acute myeloid leukemia; multi-targeted; FLT3, JAK2, TrkA, TrkB, TrkC) AAK1, AXL, FYN, GAK, JAK1, JAK2, JAK3, RET
T150 1575-1639 Sentence denotes Kd KIT (150nM)* Anti-inflammatory and cytokine suppression (107)
T151 1640-1662 Sentence denotes Gilteritinib (Xospata)
T152 1663-1687 Sentence denotes (acute myeloid leukemia;
T153 1688-1706 Sentence denotes FLT3-ITD; AXL) AXL
T154 1707-1719 Sentence denotes IC50 (41 nM)
T155 1720-1726 Sentence denotes (49)**
T156 1727-1746 Sentence denotes Dasatinib (Sprycel)
T157 1747-1971 Sentence denotes (chronic myeloid leukemia, Ph+acute lymphoblastic leukemia; multi-targeted; BCR-ABL, SRC) ABL1, ABL2, CSK, FYN, GAK, KIT, LYN, SRC, YES Anti-inflammatory, cytokine suppression, antifibrotic (100) (99) (102) (103) (104) (101)
T158 1972-2029 Sentence denotes Imatinib Mesylate (Gleevec (US)/Glivec (Europe/Australia)
T159 2030-2394 Sentence denotes (chronic myeloid leukemia, Ph+acute lymphoblastic leukemia, gastrointestinal stromal tumor, chronic eosinophilic leukemia, hypereosinophilic syndrome, systemic mastocytosis; myelodysplastic syndrome; BCR-ABL, KIT, FIP1L1-PDGFRalpha) ABL1, ABL2, KIT Anti-inflammatory, cytokine suppression/immunomodulatory, antifibrotic (91) (92) (90) (79) (94) (95) (96) (93) (77)
T160 2395-2414 Sentence denotes Nilotinib (Tasigna)
T161 2415-2515 Sentence denotes (chronic myeloid leukemia; BCR-ABL) ABL1, ABL2, KIT Antifibrotic ((80) (81) (82) (83) (84) (85) (86)
T162 2516-2535 Sentence denotes Ponatinib (Iclusig)
T163 2536-2657 Sentence denotes (chronic myeloid leukemia, Ph+ acute lymphoblastic leukemia; BCR-ABL) ABL1, ABL2, KIT, RET, SRC Cytokine suppression (78)
T164 2658-2669 Sentence denotes Saracatinib
T165 2670-2751 Sentence denotes (orphan drug status, idiopathic pulmonary fibrosis; ABL, SRC, LCK, FGR, BLK) ABL1
T166 2752-2771 Sentence denotes FYN, LYN, SRC, YES1
T167 2772-2895 Sentence denotes IC50 v-ABL (30 nM); IC50 FYN (10 nM); IC50 LYN (5 nM) (isolated protein kinase assay) (186)** Antifibrotic (100) (99) (105)
T168 2896-2915 Sentence denotes Bosutinib (Bosulif)
T169 2916-3078 Sentence denotes (chronic myeloid leukemia; ABL, SRC) ABL1, ABL2, AXL, CSK, EGFR, FYN, GAK, LYN, SRC, YES Anti-inflammatory, cytokine suppression, and antifibrotic (104) (87) (88)
T170 3079-3101 Sentence denotes Baricitinib (Olumiant)
T171 3102-3153 Sentence denotes (rheumatoid arthritis; JAK1, JAK2) JAK1, JAK2, TYK2
T172 3154-3272 Sentence denotes Kd AAK1 (17 nM); Kd GAK (136 nM) (cell-free assay) (47)** Anti-inflammatory and cytokine suppression (106) (107) (108)
T173 3273-3293 Sentence denotes Ruxolitinib (Jakafi)
T174 3294-3368 Sentence denotes (myelofibrosis, polycythemia vera; JAK1, JAK2) GAK, JAK1, JAK2, JAK3, TYK2
T175 3369-3490 Sentence denotes Kd AAK1 (100 nM); Kd GAK (120 nM) (cell-free assay) (47)** Anti-inflammatory and cytokine suppression, antifibrotic (107)
T176 3491-3511 Sentence denotes Fedratinib (Inrebic)
T177 3512-3565 Sentence denotes (myelofibrosis; JAK2) AAK1, ABL1, FYN, GAK, JAK2, SRC
T178 3566-3673 Sentence denotes Kd AAK1 32 nM; Kd GAK 1 nM (cell-free assay) (47)** Anti-inflammatory and cytokine suppression, (107) (115)
T179 3674-3698 Sentence denotes Tofacitinib (XELJANZ XR)
T180 3699-3821 Sentence denotes (ulcerative colitis, rheumatoid arthritis, psoriatic arthritis, ankylosing spondylitis; JAK1, JAK3) JAK1, JAK2, JAK3, TYK2
T181 3822-3921 Sentence denotes No AAK1 inhibitory activity (47) Anti-inflammatory and cytokine suppression (109) (110) (107) (111)
T182 3922-3940 Sentence denotes Gefitinib (Iressa)
T183 3941-4022 Sentence denotes (non-small cell lung cancer; EGFR) EGFR, GAK Antifibrotic (119) (116) (178) (118)
T184 4023-4042 Sentence denotes Afatinib (Gilotrif)
T185 4043-4176 Sentence denotes (non-small cell lung cancer, advanced squamous cell carcinoma; Her2/EGFR) EGFR, GAK Anti-inflammatory, antifibrotic (116) (178) (179)
T186 4177-4206 Sentence denotes Lapatinib (Tykerb and Tyverb)
T187 4207-4269 Sentence denotes (breast cancer; Erb1/Erb2, EGFR) EGFR Antifibrotic (116) (178)
T188 4270-4293 Sentence denotes Osimertinib (Tagrisso)’
T189 4294-4333 Sentence denotes (non-small cell lung cancer; EGFR) EGFR
T190 4334-4461 Sentence denotes (60)** AZ5104, active metabolite of osimertinib, downregulates Th17-related cytokine production via inhibition of SRC-ERK-STAT3
T191 4462-4467 Sentence denotes (127)
T192 4468-4487 Sentence denotes Erlotinib (Tarceva)
T193 4488-4557 Sentence denotes (non-small cell lung cancer, pancreatic cancer; Erb1, EGFR) EGFR, GAK
T194 4558-4573 Sentence denotes Kd ABL1 (310nM)
T195 4574-4603 Sentence denotes (48) Antifibrotic (116) (178)
T196 4604-4623 Sentence denotes Neratinib (Nerlynx)
T197 4624-4655 Sentence denotes (breast cancer; Her2/EGFR) EGFR
T198 4656-4676 Sentence denotes Pazopanib (Votrient)
T199 4677-4818 Sentence denotes (renal cell carcinoma, advanced soft tissue sarcoma; multi-targeted; c-KIT, FGFR, PDGFR, VEGFR) KIT Anti-inflammatory potential, antifibrotic
T200 4819-4824 Sentence denotes (136)
T201 4825-4844 Sentence denotes Sorafenib (Nexavar)
T202 4845-4984 Sentence denotes (renal cell carcinoma, hepatocellular carcinoma, thyroid cancer; multi-targeted; PDGFR, VEGFR, RAF) KIT, RET Antifibrotic (125) (126) (187)
T203 4985-5010 Sentence denotes Sunitinib malate (Sutent)
T204 5011-5208 Sentence denotes (renal cell carcinoma, gastrointestinal stromal tumor; multi-targeted; PDGFR, VEGFR) AAK1, AXL, GAK, JAK1, KIT, RET Anti-inflammatory potential, cytokine suppression, antifibrotic (137) (135) (107)
T205 5209-5226 Sentence denotes Axitinib (Inlyta)
T206 5227-5352 Sentence denotes (renal cell carcinoma; c-KIT, PDGFR, VEGFR1, VEGFR2, VEGFR3) ABL1, ABL2, KIT Anti-inflammatory and cytokine suppression (128)
T207 5353-5374 Sentence denotes Vandetanib (Caprelsa)
T208 5375-5448 Sentence denotes (medullary thyroid carcinoma; EGFR, RET, VEGFR) ABL2, EGFR, GAK, RET, SRC
T209 5449-5469 Sentence denotes Kd ABL1 (270nM) (48)
T210 5470-5492 Sentence denotes Regorafenib (Stivarga)
T211 5493-5609 Sentence denotes (colorectal cancer, gastrointestinal stromal tumor, hepatocellular cancer; PDGFRβ, Raf-1, TIE2, VEGFR1/2/3) KIT, RET
T212 5610-5631 Sentence denotes Ibrutinib (Imbruvica)
T213 5632-5812 Sentence denotes (mantel cell lymphoma, Waldenstrom macroglobulinemia, chronic lymphocytic leukemia, Small lymphocytic lymphoma, marginal zone lymphoma; BTK) EGFR, RET Anti-inflammatory (132) (133)
T214 5813-5834 Sentence denotes Palbociclib (Ibrance)
T215 5835-5867 Sentence denotes (breast cancer; CDK4, CDK6) CDK6
T216 5868-5904 Sentence denotes Abemaciclib (Verzenio and Verzenios)
T217 5905-5936 Sentence denotes (breast cancer, CDK4,CDK6) CDK6
T218 5937-5953 Sentence denotes IC50 (10 nmol/L)
T219 5954-5958 Sentence denotes CDK9
T220 5959-5975 Sentence denotes IC50 (57 nmol/L)
T221 5976-6085 Sentence denotes (188)** Abemaciclib in combination with anastrozole led to increased cytokine signaling and immune activation
T222 6086-6091 Sentence denotes (189)
T223 6092-6101 Sentence denotes Alvocidib
T224 6102-6199 Sentence denotes (orphan drug status, acute myeloid leukemia; CDK1, CDK2, CDK4, CDK9) CDK9 Anti-inflammatory (134)
T225 6200-6219 Sentence denotes Ceritinib (Zykadia)
T226 6220-6274 Sentence denotes (non-small cell lung cancer; ALK, IGF1R, InsR, STK22D)
T227 6275-6295 Sentence denotes Crizotinib (Xalkori)
T228 6296-6344 Sentence denotes (non-small cell lung cancer; ALK/ROS1) ABL1, AXL
T229 6345-6364 Sentence denotes Masitinib (Masivet)
T230 6365-6471 Sentence denotes (orphan drug status, potential amyotrophic lateral sclerosis drug; FAK, FGFR3, KIT, LCK, PDGFR) ABL1, KIT,
T231 6472-6475 Sentence denotes LYN
T232 6476-6506 Sentence denotes Nintedanib (Ofev and Vargatef)
T233 6507-6702 Sentence denotes (idiopathic pulmonary fibrosis, non-small cell lung cancer; FGFR, PDGFR, VEGFR) AAK1, ABL1, AXL, JAK2, JAK3, KIT, RET, YES1 Anti-inflammatory, cytokine suppression, antifibrotic (129) (130) (131)
T234 6703-6715 Sentence denotes Left Column:
T235 6716-6780 Sentence denotes Drug names and disease indication, and main therapeutic targets.
T236 6781-6795 Sentence denotes Middle Column:
T237 6796-7056 Sentence denotes Potency (based on KINOMEscan data) against key proteins associated with respiratory function and proteins involved in viral replication/life span/infection- believed to be necessary for a wide variety of viruses, including SARS-CoV and MERS-CoV and SARS-CoV-2.
T238 7057-7070 Sentence denotes Right column:
T239 7071-7172 Sentence denotes Anti-inflammatory activity, cytokine suppression, and antifibrotic activity of the kinase inhibitors.
T240 7173-7252 Sentence denotes *These values were derived from ChEMBL database: https://www.ebi.ac.uk/chembl/.
T241 7253-7323 Sentence denotes **These values were not derived from KINOMEscan; References are cited.