PMC:7371427 / 74630-75716 JSONTXT 4 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T446 0-8 Sentence denotes Table 1.
T447 10-32 Sentence denotes Results of evaluation.
T448 33-86 Sentence denotes Performance of approximately 2100 disease-gene pairs.
T449 87-183 Sentence denotes Assoc score↓ Cohen’s d (+) Mann-W U norm. (-) Logistic log loss (-) Logistic Brier score (-)
T450 184-222 Sentence denotes Cosine (w2v) 1.31 0.197 0.51 0.168
T451 223-258 Sentence denotes Raw PMI 2.07 0.0953 0.374 0.116
T452 259-307 Sentence denotes Raw PMI -log(pctile) 2.15 0.0947 0.355 0.111
T453 308-343 Sentence denotes Exp PMI 2.17 0.0897 0.356 0.109
T454 344-392 Sentence denotes Exp PMI -log(pctile) 2.21 0.0903 0.341 0.105
T455 393-437 Sentence denotes Raw Local Score 2.35 0.0828 0.312 0.0947
T456 438-495 Sentence denotes Raw Local Score -log(pctile) 2.28 0.0832 0.317 0.0963
T457 496-544 Sentence denotes Exp Local Score 2.34 0.0812 *0.301 *0.0915
T458 545-605 Sentence denotes Exp Local Score -log(pctile) *2.36 *0.0811 0.308 0.093
T459 606-643 Sentence denotes log(coocc) 2.24 0.097 0.348 0.105
T460 644-678 Sentence denotes Interpretation of the above table.
T461 679-789 Sentence denotes Each row corresponds to an association score whereas each column corresponds to one of the evaluation metrics.
T462 790-935 Sentence denotes A (+) in the column means a higher evaluation metric value, the better the association score in that row separates the positive and random pairs.
T463 936-984 Sentence denotes A (-) means a lower evaluation metric is better.
T464 985-1086 Sentence denotes Note all the metrics are immune to linear rescalings; also the Mann-Whitney U score is nonparametric.