Id |
Subject |
Object |
Predicate |
Lexical cue |
T23 |
0-92 |
Sentence |
denotes |
The patient’s condition worsened, and he had a PaO2/FIO2 ratio <140 mm Hg with FIO2 of 100%. |
T24 |
93-179 |
Sentence |
denotes |
We performed a tracheal aspirate on day 4 and sent samples to the mycology laboratory. |
T25 |
180-350 |
Sentence |
denotes |
PCR for Aspergillus fumigatus was positive (430 copies/mL; 2.6 log), but galactomannan in the aspirate assay was negative, and culture on Sabouraud agar remained sterile. |
T26 |
351-544 |
Sentence |
denotes |
Results of testing of a second tracheal aspiration performed on day 9 yielded branched septate hyphae suggestive of Aspergillus sp. under microscopic examination after silver staining (Figure). |
T27 |
545-688 |
Sentence |
denotes |
A. fumigatus PCR was once again positive with a higher number of copies (3,600 copies/mL; 3.55 log); the galactomannan assay was not available. |
T28 |
689-745 |
Sentence |
denotes |
The patient died that day of severe respiratory failure. |
T29 |
746-838 |
Sentence |
denotes |
Culture on Sabouraud agar later grew a mold identified as A. fumigatus by mass spectrometry. |
T30 |
839-912 |
Sentence |
denotes |
Of note, SARS-CoV-2 RNA still was detectable in the tracheal aspirations. |
T31 |
913-1085 |
Sentence |
denotes |
Results of serum analyses, including galactomannan index determination, β-D-glucan assay, and A. fumigatus PCR, were negative in serum samples collected on day 4 and day 8. |