Id |
Subject |
Object |
Predicate |
Lexical cue |
T300 |
0-87 |
Sentence |
denotes |
Figure 7 Mapping Regulated Kinases to Kinase Inhibitors Identifies SARS-CoV-2 Therapies |
T301 |
88-196 |
Sentence |
denotes |
(A) Kinase inhibitors (left) mapped to kinases (right) whose activity was regulated by SARS-CoV-2 infection. |
T302 |
197-272 |
Sentence |
denotes |
Lines connecting them indicate known kinase targets for each drug/compound. |
T303 |
273-385 |
Sentence |
denotes |
(B) Vero E6 cells pre-treated with remdesivir at the indicated doses, followed by SARS-CoV-2 infection for 48 h. |
T304 |
386-524 |
Sentence |
denotes |
Percent viral titer compared with mock drug treatment (anti-NP antibody; red line, dots, and text) and cell viability (black) is depicted. |
T305 |
525-549 |
Sentence |
denotes |
Error bars represent SD. |
T306 |
550-564 |
Sentence |
denotes |
(C) As in (B). |
T307 |
565-629 |
Sentence |
denotes |
Vero E6 cells were treated with the CK2 inhibitor silmitasertib. |
T308 |
630-763 |
Sentence |
denotes |
Physical interactions between N protein and the CSNK2A2 and CSNK2B CK2 subunits were observed in a prior study (Gordon et al., 2020). |
T309 |
764-957 |
Sentence |
denotes |
(D) Predicted increased kinase activity for the p38 signaling pathway and drugs/compounds targeting pathway members (ralimetinib, MAPK13-IN-1, and ARRY-797) and upstream drivers (gilteritinib). |
T310 |
958-974 |
Sentence |
denotes |
(E–G) As in (B). |
T311 |
975-1149 |
Sentence |
denotes |
Vero E6 cells treated with the AXL inhibitor gilteritinib (E), the MAPK11/14 inhibitor ralimetinib (F), or the MAPK13 inhibitor MAPK13-IN-1 (G) prior to SARS-CoV-2 infection. |
T312 |
1150-1264 |
Sentence |
denotes |
(H) A549-ACE2 lung epithelial cells were treated with the MAPK14 inhibitor ARRY-797 prior to SARS-CoV-2 infection. |
T313 |
1265-1489 |
Sentence |
denotes |
(I) Small interfering RNA (siRNA) knockdown of p38 pathway genes in A549-ACE2 leads to a significant decrease in SARS-CoV-2 viral replication (red), as assessed by qRT-PCR in the absence of effects on cell viability (black). |
T314 |
1490-1581 |
Sentence |
denotes |
ACE2 and non-targeting siRNAs are included as positive and negative controls, respectively. |
T315 |
1582-1734 |
Sentence |
denotes |
(J and K) Vero E6 or A549-ACE2 cells were treated with PIKFYVE inhibitor apilimod (J) or the CDK inhibitor dinaciclib (K) prior to SARS-CoV-2 infection. |
T316 |
1735-1754 |
Sentence |
denotes |
See also Figure S6. |