| Id |
Subject |
Object |
Predicate |
Lexical cue |
| T156 |
0-275 |
Sentence |
denotes |
Attempted discovery of continuous short sequences of amino acid residues (potential “sequence motifs”) with patterns and amino acid content common to SARS-CoV-2 spike protein amino acid sequences and hemagglutinins and neuraminidases, particularly those of influenza viruses. |
| T157 |
276-475 |
Sentence |
denotes |
Also, more generally, in preparative work, comparison of the spike protein sequence of the spike protein with sialic acid glycan binding proteins and other sugar binding proteins, or domains of them. |
| T158 |
476-616 |
Sentence |
denotes |
Protein sequences or parts of them used as input for any part of the study were obtained from GenBank https://www.ncbi.nlm.nih.gov/genbank/. |
| T159 |
617-846 |
Sentence |
denotes |
The standard method of bioinformatics used for detecting in large protein sequence databases any amino acid residue sequences similar to those of an input sequence was primarily BLASTp at https://blast.ncbi.nlm.nih.gov/Blast.cgi. |
| T160 |
847-985 |
Sentence |
denotes |
The standard tool for a more formal and typically multi-sequence alignment was Clustal Omega at https://www.ebi.ac.uk/Tools/msa/clustalo/. |
| T161 |
986-1136 |
Sentence |
denotes |
These tools can be automatically accessed by the present author's methods [4] but again that is not essential for reproducibility of the present work. |
