| Id |
Subject |
Object |
Predicate |
Lexical cue |
| T790 |
0-81 |
Sentence |
denotes |
Libraries corresponding to 279 populations were sequenced using Illumina NextSeq. |
| T791 |
82-262 |
Sentence |
denotes |
Reads were aligned to the hg19 or mm10 genome assembly using the cumulus platform https://cumulus-doc.readthedocs.io/en/0.12.0/smart_seq_2.html and output as TPM using RSEM v1.3.2. |
| T792 |
263-351 |
Sentence |
denotes |
Populations were transformed to transcripts per 10K reads and log2(1+TP10K) transformed. |
| T793 |
352-488 |
Sentence |
denotes |
ACE2 expression by stimulation condition and dose were assessed using one-way ANOVA with post hoc testing using a Bonferroni correction. |
| T794 |
489-753 |
Sentence |
denotes |
Plots were generated using ggplot2, and transcriptome-wide differential expression was calculated using the Seurat R package v3.1.0 (https://satijalab.org/seurat), function FindMarkers with test.use = ”bimod.” Expression data can be visualized and downloaded here: |
