Id |
Subject |
Object |
Predicate |
Lexical cue |
T221 |
0-143 |
Sentence |
denotes |
We then scanned 2019-nCoV virus protein sequence with each of B, A and K PWMs and associated each of 9613 9-mers with a cross reactivity score. |
T222 |
144-232 |
Sentence |
denotes |
At the same we utilized NetMHCpan and associated each 9-mer with its presentation score. |
T223 |
233-431 |
Sentence |
denotes |
Our final list of cross-reactive candidate peptides were those with a cross-reactivity sore >= 0.8 and reported as strong binders from NetMHCpan and have ‘L’ and ‘V’ amino acids at anchor positions. |
T224 |
432-519 |
Sentence |
denotes |
The custom R codes are accessible from GitHub repository (see software availability 4). |