Id |
Subject |
Object |
Predicate |
Lexical cue |
T1 |
0-121 |
Sentence |
denotes |
Serological and molecular findings during SARS-CoV-2 infection: the first case study in Finland, January to February 2020 |
T2 |
123-131 |
Sentence |
denotes |
Abstract |
T3 |
132-225 |
Sentence |
denotes |
The first case of coronavirus disease (COVID-19) in Finland was confirmed on 29 January 2020. |
T4 |
226-259 |
Sentence |
denotes |
No secondary cases were detected. |
T5 |
260-352 |
Sentence |
denotes |
We describe the clinical picture and laboratory findings 3–23 days since the first symptoms. |
T6 |
353-497 |
Sentence |
denotes |
The SARS-CoV-2/Finland/1/2020 virus strain was isolated, the genome showing a single nucleotide substitution to the reference strain from Wuhan. |
T7 |
498-649 |
Sentence |
denotes |
Neutralising antibody response appeared within 9 days along with specific IgM and IgG response, targeting particularly nucleocapsid and spike proteins. |
T8 |
651-771 |
Sentence |
denotes |
On 31 December 2019, a cluster of pneumonia cases of unknown aetiology was reported in Wuhan, Hubei Province, China [1]. |
T9 |
772-886 |
Sentence |
denotes |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was isolated by Chinese scientists on 7 January 2020. |
T10 |
887-1003 |
Sentence |
denotes |
To date, the SARS-CoV-2 virus causing the coronavirus disease (COVID-19) pandemic is spreading throughout the world. |
T11 |
1004-1155 |
Sentence |
denotes |
Here we describe the timeline of events around the first COVID-19 case imported to Finland, and summarise the clinical, molecular and serological data. |
T12 |
1156-1345 |
Sentence |
denotes |
Successful SARS-CoV-2/Finland/1/2020 isolation enabled us to use the cytopathic effect (CPE)-based microneutralisation (MN) assay to detect SARS-CoV-2-specific neutralising antibody levels. |
T13 |
1346-1500 |
Sentence |
denotes |
Diagnostic serum samples of the case and three close contacts were analysed and compared with serum samples from the Finnish population collected in 2019. |
T14 |
1502-1563 |
Sentence |
denotes |
Clinical presentation and laboratory confirmation of the case |
T15 |
1564-1710 |
Sentence |
denotes |
The first COVID-19 case in Finland was a female Chinese tourist in her 30s, who had left Wuhan on 22 January and arrived in Finland on 23 January. |
T16 |
1711-1787 |
Sentence |
denotes |
Her first symptoms were a runny nose on 26 January and nausea on 27 January. |
T17 |
1788-1881 |
Sentence |
denotes |
Because of high fever (39 °C), weakness and cough she sought medical attention on 28 January. |
T18 |
1882-2096 |
Sentence |
denotes |
Suspicion of COVID-19 led to her direct transfer to the Lapland Central Hospital in Rovaniemi, where she was isolated and sampled on 28 and 29 January for laboratory confirmation of SARS-CoV-2 infection (Figure 1). |
T19 |
2097-2315 |
Sentence |
denotes |
SARS-CoV-2 infection was confirmed from nasopharyngeal samples on 29 January by the Helsinki University Hospital Laboratory (HUSLAB), and further confirmed at the Finnish Institute for Health and Welfare (THL) (Table). |
T20 |
2316-2471 |
Sentence |
denotes |
Both laboratories performed real-time RT-PCR testing for three targets: the envelope (E), the RNA-dependent RNA polymerase (RdRp) and the nucleocapsid (N). |
T21 |
2472-2534 |
Sentence |
denotes |
Primers and probes were based on the Corman et al. method [2]. |
T22 |
2535-2597 |
Sentence |
denotes |
Cycle threshold (Ct) values above 37 were considered negative. |
T23 |
2598-2700 |
Sentence |
denotes |
Figure 1 Timeline of events around the first COVID-19 case imported to Finland, January–February 2020 |
T24 |
2701-2731 |
Sentence |
denotes |
COVID-19: coronavirus disease. |
T25 |
2732-2828 |
Sentence |
denotes |
Table Laboratory data of the first case of SARS-CoV-2 infection, Finland, January–February 2020 |
T26 |
2829-2919 |
Sentence |
denotes |
Sampling day Day since the first symptoms Specimen PCR done at E RdRp N MN IgM IgG |
T27 |
2920-2989 |
Sentence |
denotes |
28 Jan 2020Day 3 NPS HUSTHL ND30.49 ND30.48 ND31.59 NA NA NA |
T28 |
2990-3070 |
Sentence |
denotes |
29 Jan 2020Day 4 NPA HUSTHL 31.1827.13 27.56 28.43 28.2928.73 NA NA NA |
T29 |
3071-3132 |
Sentence |
denotes |
NPS HUSTHL 28.1529.59 27.1330.87 28.8231.78 NA NA NA |
T30 |
3133-3187 |
Sentence |
denotes |
Serum THLUH NegNeg NegNeg NegNeg < 4 < 20 < 20 |
T31 |
3188-3253 |
Sentence |
denotes |
03 Feb 2020Day 9 NPS HUSTHL NegNeg NegNeg NegNeg NA NA NA |
T32 |
3254-3289 |
Sentence |
denotes |
Serum UH ND Neg Neg 60 80 80 |
T33 |
3290-3356 |
Sentence |
denotes |
04 Feb 2020Day 10 NPS HUSTHL NegNeg NegNeg NegNeg NA NA NA |
T34 |
3357-3392 |
Sentence |
denotes |
Serum ND ND ND ND 72 160 160 |
T35 |
3393-3453 |
Sentence |
denotes |
14 Feb 2020Day 20 Serum UH Neg Neg Neg 160 320 1,280 |
T36 |
3454-3520 |
Sentence |
denotes |
17 Feb 2020Day 23 NPS HUSTHL NegNeg NegNeg NegNeg NA NA NA |
T37 |
3521-3551 |
Sentence |
denotes |
E: envelope protein gene; HUS: |
T38 |
3552-3884 |
Sentence |
denotes |
Helsinki University Hospital Laboratory; IgG: immunoglobulin G; IgM: immunoglobulin M; MN: microneutralisation test; N: nucleocapsid protein gene; NA: not applicable; ND: not done; Neg: negative; NPA: nasopharyngeal aspirate; NPS: nasopharyngeal swab; RdRp: RNA-dependent RNA polymerase gene; RT-PCR: reverse-transcription PCR; THL: |
T39 |
3885-3930 |
Sentence |
denotes |
Finnish Institute for Health and Welfare; UH: |
T40 |
3931-3954 |
Sentence |
denotes |
University of Helsinki. |
T41 |
3955-4014 |
Sentence |
denotes |
The case had mild symptoms throughout the isolation period. |
T42 |
4015-4143 |
Sentence |
denotes |
She was tested PCR-negative in 3 and 4 February samples and, as considered asymptomatic, discharged from hospital on 5 February. |
T43 |
4144-4233 |
Sentence |
denotes |
One additional sample for serology and PCR was taken on 14 and 17 February, respectively. |
T44 |
4234-4305 |
Sentence |
denotes |
Altogether 21 close contacts were identified of whom we could reach 17. |
T45 |
4306-4374 |
Sentence |
denotes |
Fourteen were still in Finland and placed in quarantine for 14 days. |
T46 |
4375-4516 |
Sentence |
denotes |
Information about three close contacts that had left the country was communicated to the competent authorities in their respective countries. |
T47 |
4517-4582 |
Sentence |
denotes |
For the remaining four close contacts, we had no contact details. |
T48 |
4583-4726 |
Sentence |
denotes |
Two of the 21 close contacts were closely co-exposed and therefore sampled on Days 4, 10, 12 and 14 after the first symptoms of the index case. |
T49 |
4727-4812 |
Sentence |
denotes |
Follow-up of all contacts ended on 11 February without secondary transmission events. |
T50 |
4814-4855 |
Sentence |
denotes |
SARS-CoV-2/Finland/1/2020 virus isolation |
T51 |
4856-5068 |
Sentence |
denotes |
The SARS-CoV-2 virus SARS-CoV-2/Finland/1/2020 was isolated in a biosafety level 3 (BSL-3) laboratory in Vero E6 cells from the Day 4 nasopharyngeal swab (NPS) and nasopharyngeal aspirate (NPA) specimens (Table). |
T52 |
5069-5355 |
Sentence |
denotes |
The samples were inoculated into the cells for 1 h at 37 °C and 5% CO2 and fresh culture medium (Eagle's minimum essential medium (EMEM) supplemented with 2% fetal bovine serum (FBS), 0.6 μg/mL penicillin, 60 μg/mL streptomycin, 2 mM L-glutamine, 20 mM HEPES) were added for incubation. |
T53 |
5356-5509 |
Sentence |
denotes |
On the 4th day of incubation, half of the cultures were blind-passaged onto fresh Vero E6 cells and the rest of original passages were incubated further. |
T54 |
5510-5591 |
Sentence |
denotes |
After 4 days incubation a clear CPE was detected in the NPA-originated passage 2. |
T55 |
5592-5738 |
Sentence |
denotes |
The propagation of stock virus was done by passaging a low virus dose once again in Vero E6 cells, and virus culture was harvested on the 3rd day. |
T56 |
5739-5782 |
Sentence |
denotes |
Virus concentration was followed by RT-PCR. |
T57 |
5783-5989 |
Sentence |
denotes |
The Ct value for virus passage 1 on the 6th day of incubation was 17.65 and for passage 2 on the 2nd day, before any CPE was 20.63, whereas those of the NPS specimen remained at Ct values between 35 and 36. |
T58 |
5991-6040 |
Sentence |
denotes |
SARS-CoV-2/Finland/1/2020 whole-genome sequencing |
T59 |
6041-6295 |
Sentence |
denotes |
Nearly the complete coding region of SARS-CoV-2 (GenBank accession number: MT020781) was sequenced from the NPS collected on Day 4 (Table) and the complete coding region was sequenced from the virus isolate obtained after three passages in Vero E6 cells. |
T60 |
6296-6550 |
Sentence |
denotes |
The virus had 1 nt substitution C21707T compared with the reference strain Wuhan-Hu-1 collected in Wuhan China, December 2019 (NC_045512) [3] which had led to a histidine to tyrosine (H49Y) substitution in the N-terminal domain of the spike glycoprotein. |
T61 |
6552-6601 |
Sentence |
denotes |
Antibody response during the SARS-CoV-2 infection |
T62 |
6602-6719 |
Sentence |
denotes |
Serum samples were collected from the index case on Days 4, 9, 10 and 20 from onset of the first symptoms (Figure 1). |
T63 |
6720-7005 |
Sentence |
denotes |
Presence of serum IgM and IgG antibodies against SARS-CoV-2 was analysed by immunofluorescence assays (IFA) based on Vero E6 cells infected with passage 4 of the patient’s isolate SARS-CoV-2/Finland/1/2020 virus and transferred onto microscope slides and fixed with acetone (Figure 2). |
T64 |
7006-7111 |
Sentence |
denotes |
Serum samples from the index case were serially diluted and incubated for 2 h for IgM and 30 min for IgG. |
T65 |
7112-7222 |
Sentence |
denotes |
Antibodies were visualised with fluorescein isothiocyanate (FITC)-conjugated anti-human IgM or IgG antibodies. |
T66 |
7223-7396 |
Sentence |
denotes |
While the antibodies were undetectable on Day 4 after onset of symptoms, IgG titres rose to 80 and 1,280 and IgM titres to 80 and 320 on Days 9 and 20, respectively (Table). |
T67 |
7397-7546 |
Sentence |
denotes |
Random serum samples from staff members of the University of Helsinki (n = 19) did not show specific binding at dilutions greater than 20 (Figure 2). |
T68 |
7547-7651 |
Sentence |
denotes |
Figure 2 Immunofluorescence assay of serum samples, COVID-19 index case, Finland, January–February 2020 |
T69 |
7652-7687 |
Sentence |
denotes |
COVID-19: coronavirus disease 2019. |
T70 |
7688-7828 |
Sentence |
denotes |
Anti-SARS-CoV-2 IgM and IgG antibodies were detectable by immunofluorescence assay in samples from Days 9, 10 and 20 after onset of illness. |
T71 |
7829-7920 |
Sentence |
denotes |
Both IgM and IgG were found at a titre of 80 on Day 9, titres on Day 20 were 320 and 1,280. |
T72 |
7921-8043 |
Sentence |
denotes |
As an example, dilutions 1:20 and 1:160 from the Day 20 sample are shown for, respectively, IgM and IgG of the index case. |
T73 |
8044-8084 |
Sentence |
denotes |
Dilution 20 shown for the control serum. |
T74 |
8085-8278 |
Sentence |
denotes |
Mock- and SARS-CoV2-infected Vero E6 cells collected on Day 6 post infection were lysed in Laemmli sample buffer, and Western blotting (WB) of lysates was performed as described previously [4]. |
T75 |
8279-8388 |
Sentence |
denotes |
At 1:200 dilution, the convalescent serum on Day 20 identified SARS-CoV2 N, S and E protein bands (Figure 3). |
T76 |
8389-8477 |
Sentence |
denotes |
At higher exposure, all bands were detectable even at 1:1,600 serum dilution (Figure 3). |
T77 |
8478-8641 |
Sentence |
denotes |
Figure 3 Western blot of mock- and SARS-CoV-2 infected Vero E6 cells using patient serum collected 20 days after onset of symptoms, Finland, January–February 2020 |
T78 |
8642-8739 |
Sentence |
denotes |
Top left panel: total protein staining (Ponceau S) of the nitrocellulose membrane before probing. |
T79 |
8740-8833 |
Sentence |
denotes |
Top right panel: strips probed with different dilutions of the patient serum at low exposure. |
T80 |
8834-8917 |
Sentence |
denotes |
Bottom panel: the same membranes individually contrasted for higher band intensity. |
T81 |
8918-9087 |
Sentence |
denotes |
The arrows indicate SARS-CoV-2 proteins, the labelling assumes that the migration of SARS-CoV-2 proteins was similar to that of Vero E6-expressed SARS-CoV proteins [23]. |
T82 |
9088-9172 |
Sentence |
denotes |
The bands migrating at ca 110 and 90 kDa probably represent S1 and S2, respectively. |
T83 |
9173-9230 |
Sentence |
denotes |
Marker M: Precision Plus Dual Colour Standards (Bio-Rad). |
T84 |
9231-9360 |
Sentence |
denotes |
The detection was done using Odyssey Infrared Imaging System (LI-COR) using goat anti-human IR800 conjugate at 1:10,000 dilution. |
T85 |
9361-9476 |
Sentence |
denotes |
SARS-CoV-2-specific neutralising antibody levels were measured in duplicate with the MN test in a BSL-3 laboratory. |
T86 |
9477-9652 |
Sentence |
denotes |
The serum samples were heat-inactivated at 56 °C for 30 min and 2-fold serially diluted starting from 1:4 in EMEM supplemented with 2% of heat-inactivated FBS and antibiotics. |
T87 |
9653-9791 |
Sentence |
denotes |
Fifty plaque‐forming units (PFU) of the SARS-CoV-2/Finland/1/2020 strain were added to the serum dilutions and incubated for 1 h at 37 °C. |
T88 |
9792-9936 |
Sentence |
denotes |
Vero E6 cells (5 × 104/well) were added to the virus–serum mix, and the mixture was incubated in 96-well plates for 4 days at 37 °C with 5% CO2. |
T89 |
9937-9972 |
Sentence |
denotes |
Neutralisation was assessed by CPE. |
T90 |
9973-10125 |
Sentence |
denotes |
The neutralisation endpoint was determined as the 50% endpoint of the serum that inhibited the SARS-CoV-2 infection observed by CPE of inoculated cells. |
T91 |
10126-10243 |
Sentence |
denotes |
Diagnostic serum samples from the index case and her three asymptomatic close contacts were studied with the MN test. |
T92 |
10244-10322 |
Sentence |
denotes |
During the acute phase of infection, no neutralising antibodies were detected. |
T93 |
10323-10449 |
Sentence |
denotes |
The patient seroconverted for neutralising antibodies between Day 4 and 9, with the titre increasing to 160 on Day 20 (Table). |
T94 |
10450-10535 |
Sentence |
denotes |
The serum specimens were confirmed not to be toxic or infective to the cells as such. |
T95 |
10536-10613 |
Sentence |
denotes |
Serum samples taken from the three close contacts tested negative in MN test. |
T96 |
10614-10729 |
Sentence |
denotes |
We also tested serum samples collected in 2019 from 83 Finnish subjects aged 4 to 89 years and all tested negative. |
T97 |
10730-10904 |
Sentence |
denotes |
Sera known to be positive for IgG against human coronavirus OC43 and 229E [5] and rabbit or guinea pig antibody against SARS-CoV N protein [6] could not neutralise the virus. |
T98 |
10906-10923 |
Sentence |
denotes |
Ethical statement |
T99 |
10924-11234 |
Sentence |
denotes |
The investigations were carried out in accordance with the General Data Protection Regulation (Regulation (EU) 2016/679 and Directive 95/46/EC) and the Finnish Personal Data Act (Finlex 523/1999) The Finnish Communicable Diseases Act (Finlex 1227/2016) allows sampling for diagnostic and surveillance purposes. |
T100 |
11235-11428 |
Sentence |
denotes |
The convalescent serum sample was obtained on 14 February through informed consent of the patient and research permits (TYH2018322, TYH2019263) from the Helsinki University Hospital Laboratory. |
T101 |
11429-11489 |
Sentence |
denotes |
Finnish population serum samples were collected during 2019. |
T102 |
11490-11635 |
Sentence |
denotes |
The study protocol was approved by the Ethics Committee of the Department of Medicine, Helsinki University Hospital (Permission 433/13/03/00/15). |
T103 |
11636-11723 |
Sentence |
denotes |
Serum samples of University of Helsinki staff members were used under informed consent. |
T104 |
11725-11735 |
Sentence |
denotes |
Discussion |
T105 |
11736-11864 |
Sentence |
denotes |
In the early phase of the COVID-19 outbreak, confirmed cases outside China were mostly imported among travellers from Wuhan [7]. |
T106 |
11865-11959 |
Sentence |
denotes |
The first case in Finland was detected on 29 January among the first imported cases in Europe. |
T107 |
11960-12081 |
Sentence |
denotes |
The case presented mild symptoms without pneumonia: runny nose, nausea, high fever, cough, muscular weakness and fatigue. |
T108 |
12082-12195 |
Sentence |
denotes |
No secondary transmission events were detected despite active follow-up by the Lapland Hospital district and THL. |
T109 |
12196-12301 |
Sentence |
denotes |
As at 17 March 2020, 358 additional laboratory-confirmed cases of COVID-19 have been detected in Finland. |
T110 |
12302-12442 |
Sentence |
denotes |
Many of them are travel-related (mostly from northern Italy and Austria) but there is also local transmission from the travel-related cases. |
T111 |
12443-12690 |
Sentence |
denotes |
The risk of widespread national community transmission of COVID-19 infection in the European Union, European Economic Area and the United Kingdom in the coming weeks is considered high by the European Centre for Disease Prevention and Control [8]. |
T112 |
12691-12839 |
Sentence |
denotes |
The sequence of the viral genome of the patient was nearly identical to the reference strain from Wuhan, reflecting an early importation from China. |
T113 |
12840-12976 |
Sentence |
denotes |
Later sequence information in Finland (up to 2 March) showed clustering with strains circulating in Italy (see nextstrain.org/ncov) [9]. |
T114 |
12977-13251 |
Sentence |
denotes |
Current guidelines from the World Health Organization for testing COVID-19 recommend collection of both acute and convalescent serum samples from patients for serological testing, which can support the identification of the immune response to a specific viral pathogen [10]. |
T115 |
13252-13389 |
Sentence |
denotes |
The SARS-CoV-2 nucleic acid has been found also in anal swabs and blood [11], however we did not detect it in serum samples in this case. |
T116 |
13390-13488 |
Sentence |
denotes |
As yet, only limited data are available on antibody responses during SARS-CoV-2 infection [11,12]. |
T117 |
13489-13669 |
Sentence |
denotes |
Further studies are needed to better understand the seroprevalence of antibodies to different corona viruses in populations and the role of these antibodies in the risk of disease. |
T118 |
13670-13899 |
Sentence |
denotes |
In accordance with earlier findings [11], we found that both IgM and IgG titres were low or undetectable at on Day 4 (the second day after admission to hospital) yet increasing on Day 9–10, i.e. 5–6 days after the first sampling. |
T119 |
13900-14057 |
Sentence |
denotes |
Using other detection methods beyond IFA as well as recombinant antigens and analysing samples from a larger number of patients will shed more light on this. |
T120 |
14058-14205 |
Sentence |
denotes |
The time of first appearance of anti-SARS-CoV antibodies has ranged from Day 3 to 42 and Day 5 to 47 for IgM and IgG antibodies, respectively [13]. |
T121 |
14206-14395 |
Sentence |
denotes |
The WB of the serum sample collected at convalescence showed a prominent response against the N and S protein, confirming their role as main candidate diagnostic targets for antibody tests. |
T122 |
14396-14501 |
Sentence |
denotes |
However, the patient serum appeared to recognise also the E protein and the processed S1 and S2 proteins. |
T123 |
14502-14646 |
Sentence |
denotes |
Although WB detects mainly linear epitopes, the strong antibody response against the S protein correlated well with the results of the MN assay. |
T124 |
14647-14847 |
Sentence |
denotes |
Monitoring of the binding antibodies is suggested to be a more sensitive method than measuring functional neutralising antibodies for serological detection of human coronavirus (hCoV) infections [14]. |
T125 |
14848-14938 |
Sentence |
denotes |
However, hCoV OC43 and 229E samples can also cross-react with SARS-CoV ELISA testing [15]. |
T126 |
14939-15075 |
Sentence |
denotes |
The SARS-CoV-2 CPE-based MN test using live virus appeared to be very specific, while laborious to conduct requiring a BSL-3 laboratory. |
T127 |
15076-15276 |
Sentence |
denotes |
An increase of at least 4-fold in the neutralising antibodies indicating a positive response was detected at Day 9–10 after the first symptoms and at Day 20, the antibody levels were still increasing. |
T128 |
15277-15441 |
Sentence |
denotes |
Our findings indicate that the MN assay is specific for functional SARS-CoV-2 antibodies and could be applied in surveillance of population immunity for this virus. |
T129 |
15442-15620 |
Sentence |
denotes |
The assay can be used as confirmatory tool for SARS-CoV-2 specificity in the development of more accessible diagnostic tools such as assays based on detecting binding antibodies. |
T130 |
15621-15804 |
Sentence |
denotes |
Previous studies on patients with SARS-CoV infection indicated that the median time for seroconversion was 20 days, by which time 60–75% of patients had IgG against the virus [13,16]. |
T131 |
15805-15998 |
Sentence |
denotes |
That IgM and IgG antibodies were present within 2 weeks from the onset of symptoms in our study suggests that early convalescent patients may be suitable sources of therapeutic antibodies [17]. |
T132 |
15999-16246 |
Sentence |
denotes |
In accordance with our finding, a recent preprint report on patients admitted to hospital with confirmed SARS-CoV-2 infection in China indicated that the median time to seroconversion was 11–14 days, depending on the immunological assay used [18]. |
T133 |
16247-16392 |
Sentence |
denotes |
No neutralising SARS-CoV-2 antibodies were detected in the close contacts nor in the control population samples collected during 2019 in Finland. |
T134 |
16393-16538 |
Sentence |
denotes |
A low prevalence (0.21%) of antibodies against Middle East respiratory syndrome coronavirus was reported in the general population of Qatar [19]. |
T135 |
16539-16788 |
Sentence |
denotes |
A meta-analysis of seroprevalence to SARS-CoV among different human populations yielded an overall low seroprevalence (0.10%), although it was slightly higher (0.23%) among healthcare workers and others who had close contact with SARS patients [20]. |
T136 |
16789-16875 |
Sentence |
denotes |
Binding and neutralising HCoV antibodies were found to be higher in older adults [14]. |
T137 |
16876-17137 |
Sentence |
denotes |
In total 97% and 99% of serum samples from healthy adults had antibodies to HCoV-229E and HCoV-OC43, respectively [21], and 75% and 65% of the children in the age group 2.5–3.5 years were found to be seropositive for, respectively, HCoV-NL63 and HCoV-229E [22]. |
T138 |
17138-17397 |
Sentence |
denotes |
While it has been suggested that the late seroconversion in most SARS patients reduces the value of serological assays during the incubation and initial phases of SARS [13], serological testing is suggested for the confirmation of a SARS CoV-2 infection [11]. |
T139 |
17398-17625 |
Sentence |
denotes |
After understanding better the kinetics, specificity and sensitivity of the assays in development, the serological testing may help contact tracing of clusters and have a role in diagnosing acute and past SARS-CoV-2 infections. |
T140 |
17627-17643 |
Sentence |
denotes |
Acknowledgements |
T141 |
17644-17871 |
Sentence |
denotes |
We gratefully thank Mira Utriainen, Sanna Mäki, Minna Haanpää, Marja-Liisa Ollonen, Johanna Rintamäki, Hanna Valtonen, Riitta Santanen, Katri Keino, Alena Kaijalainen and Johanna Mustajoki for their expert technical assistance. |
T142 |
17872-17979 |
Sentence |
denotes |
Christel Pussinen and Mervi Nosa are thanked for their contribution to Finnish population sera collections. |
T143 |
17980-18076 |
Sentence |
denotes |
We also want to thank the anonymous patient for her help and collaboration throughout the study. |
T144 |
18077-18085 |
Sentence |
denotes |
Funding: |
T145 |
18086-18241 |
Sentence |
denotes |
The study was supported by funds from the Finnish Institute for Health and Welfare (THL), Helsinki University Hospital (HUSLAB) and University of Helsinki. |
T146 |
18242-18384 |
Sentence |
denotes |
The funding organisations had no role in the study design, data collection and analysis, decision to publish or preparation of the manuscript. |
T147 |
18386-18529 |
Sentence |
denotes |
Conflict of interest: LS is a co-investigator in an unrelated study, for which THL has received research funding from GlaxoSmithKline Vaccines. |
T148 |
18530-18590 |
Sentence |
denotes |
The other authors report no potential conflicts of interest. |
T149 |
18591-18614 |
Sentence |
denotes |
Authors’ contributions: |
T150 |
18615-18678 |
Sentence |
denotes |
All authors attest they meet the ICMJE criteria for authorship. |
T151 |
18679-18766 |
Sentence |
denotes |
All authors have contributed to, seen and approved the final version of the manuscript. |
T152 |
18767-18970 |
Sentence |
denotes |
AH set up and performed MN tests, participated in laboratory confirmation of COVID-19 suspicions, coordinated and participated in the collections of the Finnish population sera, and wrote the manuscript. |
T153 |
18971-19041 |
Sentence |
denotes |
TS performed the whole genome sequencing and genetic characterisation. |
T154 |
19042-19100 |
Sentence |
denotes |
SK and JH performed the IFA and WB analysis, respectively. |
T155 |
19101-19210 |
Sentence |
denotes |
PÖ isolated the virus and was responsible of the SARS-CoV-2 related biosafety level 3 laboratory work at THL. |
T156 |
19211-19297 |
Sentence |
denotes |
MP, MS, TP and JS participated in THL COVID-19 situation monitoring group work of THL. |
T157 |
19298-19367 |
Sentence |
denotes |
SB and MM participated in serological analysis planning group of THL. |
T158 |
19368-19419 |
Sentence |
denotes |
SB contributed in the interpretation of MN results. |
T159 |
19420-19532 |
Sentence |
denotes |
ER set up the real-time RT-PCR method at THL and participated in laboratory confirmation of COVID-19 suspicions. |
T160 |
19533-19596 |
Sentence |
denotes |
AK and TS participated in collection of the convalescent serum. |
T161 |
19597-19665 |
Sentence |
denotes |
AK had a significant role to organising convalescent serum sampling. |
T162 |
19666-19751 |
Sentence |
denotes |
HKK, LM and ML were in charge of primary diagnostic of COVID-19 suspicions in HUSLAB. |
T163 |
19752-19880 |
Sentence |
denotes |
HKK and LM also set up the real-time RT-PCR method at HUSLAB and participated in laboratory sample logistics from HUSLAB to THL. |
T164 |
19881-19940 |
Sentence |
denotes |
MB was responsible for the care of the patient in hospital. |
T165 |
19941-20015 |
Sentence |
denotes |
MJ and LS participated in interviewing the index case and contact tracing. |
T166 |
20016-20199 |
Sentence |
denotes |
OV was responsible for virological and serological studies in HUSLAB and University of Helsinki, participated in the designing of the study and organising convalescent serum sampling. |
T167 |
20200-20379 |
Sentence |
denotes |
NI and CSK were responsible of THL laboratory confirmation of COVID-19 suspicions, participated in COVID-19 situation monitoring group work of THL and laboratory sample logistics. |
T168 |
20380-20503 |
Sentence |
denotes |
CSK was also responsible for the collections of the Finnish population sera and participated in the designing of the study. |