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PubMed:32159237 JSONTXT 16 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
tok1 0-4 IN denotes From
lookup1 0-4 stop denotes From
tok2 5-9 NNP denotes SARS
tok3 10-13 CC denotes and
tok4 14-18 NNP denotes MERS
tok5 19-23 NNP denotes CoVs
tok6 24-26 TO denotes to
lookup2 24-26 country_code denotes to
tok7 27-36 NNP denotes SARS-CoV-
tok8 36-37 CD denotes 2
tok9 37-38 : denotes :
tok10 39-45 VBG denotes Moving
tok11 46-52 IN denotes toward
tok12 53-57 RBR denotes more
tok13 58-64 VBN denotes biased
tok14 65-70 NN denotes codon
tok15 71-76 NN denotes usage
tok16 77-79 IN denotes in
lookup3 77-79 country_code denotes in
tok17 80-85 JJ denotes viral
tok18 86-96 JJ denotes structural
tok19 97-100 CC denotes and
tok20 101-114 NN denotes nonstructural
tok21 115-120 NNS denotes genes
tok22 120-121 . denotes .
tok23 122-132 NNP denotes BACKGROUND
tok24 132-133 : denotes :
tok25 134-140 NNP denotes Severe
tok26 141-146 JJ denotes acute
tok27 147-158 JJ denotes respiratory
tok28 159-167 NN denotes syndrome
tok29 168-179 JJ denotes coronavirus
tok30 180-181 CD denotes 2
tok31 182-183 ( denotes (
tok32 183-192 NNP denotes SARS-CoV-
tok33 192-193 LS denotes 2
tok34 193-194 ) denotes )
tok35 195-197 VBZ denotes is
lookup4 195-197 country_code denotes is
tok36 198-200 DT denotes an
lookup5 198-200 country_code denotes an
tok37 201-209 VBG denotes emerging
tok38 210-217 NN denotes disease
tok39 218-222 IN denotes with
tok40 223-228 JJ denotes fatal
tok41 229-237 NNS denotes outcomes
tok42 237-238 . denotes .
tok43 239-241 IN denotes In
tok44 242-246 DT denotes this
lookup6 242-246 time_modifier denotes this
tok45 247-252 NN denotes study
tok46 252-253 , denotes ,
tok47 254-255 DT denotes a
tok48 256-267 JJ denotes fundamental
tok49 268-277 NN denotes knowledge
tok50 278-281 NN denotes gap
tok51 282-290 NN denotes question
tok52 291-293 VBZ denotes is
lookup7 291-293 country_code denotes is
tok53 294-296 TO denotes to
lookup8 294-296 country_code denotes to
tok54 297-299 VB denotes be
lookup9 297-299 country_code denotes be
tok55 300-308 VBN denotes resolved
event4 300-308 OCCURRENCE denotes resolved
tok56 309-311 IN denotes by
lookup10 309-311 country_code denotes by
tok57 312-322 VBG denotes evaluating
event9 312-322 OCCURRENCE denotes evaluating
tok58 323-326 DT denotes the
tok59 327-338 NNS denotes differences
tok60 339-341 IN denotes in
lookup11 339-341 country_code denotes in
tok61 342-352 JJ denotes biological
tok62 353-356 CC denotes and
tok63 357-367 JJ denotes pathogenic
tok64 368-375 NNS denotes aspects
tok65 376-378 IN denotes of
tok66 379-388 NNP denotes SARS-CoV-
tok67 388-389 CD denotes 2
tok68 390-393 CC denotes and
tok69 394-397 DT denotes the
tok70 398-405 NNS denotes changes
tok71 406-408 IN denotes in
lookup12 406-408 country_code denotes in
tok72 409-418 NNP denotes SARS-CoV-
tok73 418-419 CD denotes 2
tok74 420-422 IN denotes in
lookup13 420-422 country_code denotes in
tok75 423-433 NN denotes comparison
tok76 434-438 IN denotes with
tok77 439-442 DT denotes the
tok78 443-446 CD denotes two
lookup14 443-446 time denotes two
lookup15 443-446 number denotes two
tok79 447-452 RB denotes prior
tok80 453-458 JJ denotes major
tok81 459-462 NNP denotes COV
tok82 463-472 NNS denotes epidemics
tok83 472-473 , denotes ,
tok84 474-478 NNP denotes SARS
tok85 479-482 CC denotes and
tok86 483-489 NNP denotes Middle
lookup16 483-494 location denotes Middle East
tok87 490-494 NNP denotes East
lookup17 490-494 loc_key denotes East
tok88 495-506 JJ denotes respiratory
tok89 507-515 NN denotes syndrome
tok90 516-517 ( denotes (
tok91 517-521 NNP denotes MERS
tok92 521-522 ) denotes )
tok93 523-536 NNS denotes coronaviruses
tok94 536-537 . denotes .
tok95 538-545 NNP denotes METHODS
tok96 545-546 : denotes :
tok97 547-550 DT denotes The
tok98 551-557 NN denotes genome
tok99 558-569 NN denotes composition
tok100 569-570 , denotes ,
tok101 571-581 NN denotes nucleotide
tok102 582-590 NN denotes analysis
tok103 590-591 , denotes ,
tok104 592-597 NN denotes codon
tok105 598-603 NN denotes usage
tok106 604-611 NNS denotes indices
tok107 611-612 , denotes ,
tok108 613-621 JJ denotes relative
tok109 622-632 JJ denotes synonymous
tok110 633-639 NNS denotes codons
tok111 640-645 NN denotes usage
tok112 645-646 , denotes ,
tok113 647-650 CC denotes and
tok114 651-660 JJ denotes effective
tok115 661-667 NN denotes number
tok116 668-670 IN denotes of
tok117 671-677 NNS denotes codons
tok118 678-679 ( denotes (
tok119 679-682 NNP denotes ENc
tok120 682-683 ) denotes )
tok121 684-688 VBD denotes were
tok122 689-697 VBN denotes analyzed
event5 689-697 OCCURRENCE denotes analyzed
tok123 698-700 IN denotes in
lookup18 698-700 country_code denotes in
tok124 701-704 DT denotes the
tok125 705-709 CD denotes four
lookup19 705-709 time denotes four
lookup20 705-709 number denotes four
tok126 710-720 JJ denotes structural
tok127 721-726 NNS denotes genes
tok128 726-727 : denotes ;
tok129 728-733 NNP denotes Spike
tok130 734-735 ( denotes (
tok131 735-736 NNP denotes S
tok132 736-737 ) denotes )
tok133 737-738 , denotes ,
tok134 739-747 NNP denotes Envelope
tok135 748-749 ( denotes (
tok136 749-750 NNP denotes E
lookup21 749-750 currency_unit denotes E
tok137 750-751 ) denotes )
tok138 751-752 , denotes ,
tok139 753-761 NN denotes membrane
tok140 762-763 ( denotes (
tok141 763-764 NNP denotes M
tok142 764-765 ) denotes )
tok143 765-766 , denotes ,
tok144 767-770 CC denotes and
tok145 771-783 NNP denotes Nucleocapsid
tok146 784-785 ( denotes (
tok147 785-786 NNP denotes N
tok148 786-787 ) denotes )
tok149 788-793 NNS denotes genes
tok150 793-794 , denotes ,
tok151 795-798 CC denotes and
tok152 799-802 CD denotes two
lookup22 799-802 time denotes two
lookup23 799-802 number denotes two
tok153 803-805 IN denotes of
tok154 806-809 DT denotes the
tok155 810-814 RBS denotes most
tok156 815-824 JJ denotes important
tok157 825-838 NN denotes nonstructural
tok158 839-844 NNS denotes genes
tok159 845-855 VBG denotes comprising
event3 845-855 OCCURRENCE denotes comprising
tok160 856-869 NNP denotes RNA-dependent
tok161 870-873 NNP denotes RNA
tok162 874-884 NN denotes polymerase
tok163 885-888 CC denotes and
tok164 889-893 JJ denotes main
tok165 894-902 NN denotes protease
tok166 903-904 ( denotes (
tok167 904-908 NNP denotes Mpro
tok168 908-909 ) denotes )
tok169 910-912 IN denotes of
tok170 913-922 NNP denotes SARS-CoV-
tok171 922-923 CD denotes 2
tok172 923-924 , denotes ,
lookup24 925-929 person_first denotes Beta
tok173 925-930 NNP denotes Beta-
tok174 930-933 NNP denotes CoV
tok175 934-938 IN denotes from
tok176 939-948 NNS denotes pangolins
tok177 948-949 , denotes ,
tok178 950-953 NN denotes bat
tok179 954-958 NNP denotes SARS
tok180 958-959 , denotes ,
tok181 960-964 NNP denotes MERS
tok182 964-965 , denotes ,
tok183 966-969 CC denotes and
tok184 970-974 NNP denotes SARS
tok185 975-979 NNP denotes CoVs
tok186 979-980 . denotes .
tok187 981-988 NNP denotes RESULTS
tok188 988-989 : denotes :
tok189 990-999 NNP denotes SARS-CoV-
tok190 999-1000 CD denotes 2
tok191 1001-1008 VBZ denotes prefers
tok192 1009-1019 NN denotes pyrimidine
tok193 1020-1024 JJ denotes rich
tok194 1025-1031 NNS denotes codons
tok195 1032-1034 TO denotes to
lookup25 1032-1034 country_code denotes to
tok196 1035-1042 NNS denotes purines
tok197 1042-1043 . denotes .
tok198 1044-1048 JJS denotes Most
tok199 1049-1063 JJ denotes high-frequency
tok200 1064-1070 NNS denotes codons
tok201 1071-1075 VBD denotes were
tok202 1076-1082 VBG denotes ending
event7 1076-1082 OCCURRENCE denotes ending
tok203 1083-1087 IN denotes with
tok204 1088-1089 DT denotes A
tok205 1090-1092 CC denotes or
tok206 1093-1094 NN denotes T
tok207 1094-1095 , denotes ,
tok208 1096-1101 IN denotes while
tok209 1102-1105 DT denotes the
tok210 1106-1109 JJ denotes low
tok211 1110-1119 NN denotes frequency
tok212 1120-1123 CC denotes and
tok213 1124-1128 JJ denotes rare
tok214 1129-1135 NNS denotes codons
tok215 1136-1140 VBD denotes were
tok216 1141-1147 VBG denotes ending
event2 1141-1147 OCCURRENCE denotes ending
tok217 1148-1152 IN denotes with
tok218 1153-1154 NNP denotes G
tok219 1155-1157 CC denotes or
tok220 1158-1159 NNP denotes C
tok221 1159-1160 . denotes .
tok222 1161-1170 NNP denotes SARS-CoV-
tok223 1170-1171 CD denotes 2
tok224 1172-1182 JJ denotes structural
tok225 1183-1191 NNS denotes proteins
tok226 1192-1198 VBD denotes showed
event10 1192-1198 OCCURRENCE denotes showed
tok227 1199-1200 CD denotes 5
tok228 1201-1203 TO denotes to
lookup26 1201-1203 country_code denotes to
tok229 1204-1206 CD denotes 20
tok230 1207-1212 JJR denotes lower
tok231 1213-1216 NNP denotes ENc
tok232 1217-1223 NNS denotes values
tok233 1223-1224 , denotes ,
tok234 1225-1233 VBN denotes compared
tok235 1234-1238 IN denotes with
tok236 1239-1243 NNP denotes SARS
tok237 1243-1244 , denotes ,
tok238 1245-1248 NN denotes bat
tok239 1249-1253 NNP denotes SARS
tok240 1253-1254 , denotes ,
tok241 1255-1258 CC denotes and
tok242 1259-1263 NNP denotes MERS
tok243 1264-1268 NNP denotes CoVs
tok244 1268-1269 . denotes .
tok245 1270-1274 DT denotes This
lookup27 1270-1274 time_modifier denotes This
tok246 1275-1282 VBZ denotes implies
event8 1275-1282 OCCURRENCE denotes implies
tok247 1283-1289 JJR denotes higher
tok248 1290-1295 NN denotes codon
tok249 1296-1300 NN denotes bias
tok250 1301-1304 CC denotes and
tok251 1305-1311 JJR denotes higher
tok252 1312-1316 NN denotes gene
lookup28 1312-1316 person_first denotes gene
tok253 1317-1327 NN denotes expression
tok254 1328-1338 NN denotes efficiency
tok255 1339-1341 IN denotes of
tok256 1342-1351 NNP denotes SARS-CoV-
tok257 1351-1352 CD denotes 2
tok258 1353-1363 JJ denotes structural
tok259 1364-1372 NNS denotes proteins
tok260 1372-1373 . denotes .
tok261 1374-1383 NNP denotes SARS-CoV-
tok262 1383-1384 CD denotes 2
tok263 1385-1392 JJ denotes encoded
tok264 1393-1396 DT denotes the
tok265 1397-1404 JJS denotes highest
tok266 1405-1411 NN denotes number
tok267 1412-1414 IN denotes of
tok268 1415-1426 JJ denotes over-biased
tok269 1427-1430 CC denotes and
tok270 1431-1441 RB denotes negatively
tok271 1442-1448 VBN denotes biased
event6 1442-1448 OCCURRENCE denotes biased
tok272 1449-1455 NNS denotes codons
tok273 1455-1456 . denotes .
tok274 1457-1465 NNP denotes Pangolin
lookup29 1466-1470 person_first denotes Beta
tok275 1466-1471 NNP denotes Beta-
tok276 1471-1474 NNP denotes CoV
tok277 1475-1481 VBD denotes showed
event1 1475-1481 OCCURRENCE denotes showed
tok278 1482-1488 JJ denotes little
tok279 1489-1500 NNS denotes differences
tok280 1501-1505 IN denotes with
tok281 1506-1515 NNP denotes SARS-CoV-
tok282 1515-1516 CD denotes 2
tok283 1517-1520 NNP denotes ENc
tok284 1521-1527 NNS denotes values
tok285 1527-1528 , denotes ,
tok286 1529-1537 VBN denotes compared
tok287 1538-1542 IN denotes with
tok288 1543-1547 NNP denotes SARS
tok289 1547-1548 , denotes ,
tok290 1549-1552 NN denotes bat
tok291 1553-1557 NNP denotes SARS
tok292 1557-1558 , denotes ,
tok293 1559-1562 CC denotes and
tok294 1563-1567 NNP denotes MERS
tok295 1568-1571 NNP denotes CoV
tok296 1571-1572 . denotes .
tok297 1573-1583 NNP denotes CONCLUSION
tok298 1583-1584 : denotes :
tok299 1585-1592 NNP denotes Extreme
tok300 1593-1597 NN denotes bias
tok301 1598-1601 CC denotes and
tok302 1602-1607 JJR denotes lower
tok303 1608-1611 NNP denotes ENc
tok304 1612-1618 NNS denotes values
tok305 1619-1621 IN denotes of
tok306 1622-1631 NNP denotes SARS-CoV-
tok307 1631-1632 CD denotes 2
tok308 1632-1633 , denotes ,
tok309 1634-1644 RB denotes especially
tok310 1645-1647 IN denotes in
lookup30 1645-1647 country_code denotes in
tok311 1648-1653 NNP denotes Spike
tok312 1653-1654 , denotes ,
tok313 1655-1663 NNP denotes Envelope
tok314 1663-1664 , denotes ,
tok315 1665-1668 CC denotes and
tok316 1669-1673 NNP denotes Mpro
tok317 1674-1679 NNS denotes genes
tok318 1679-1680 , denotes ,
tok319 1681-1684 VBP denotes are
tok320 1685-1695 JJ denotes suggestive
tok321 1696-1699 IN denotes for
tok322 1700-1706 JJR denotes higher
tok323 1707-1711 NN denotes gene
lookup31 1707-1711 person_first denotes gene
tok324 1712-1722 NN denotes expression
tok325 1723-1733 NN denotes efficiency
tok326 1733-1734 , denotes ,
tok327 1735-1743 VBN denotes compared
tok328 1744-1748 IN denotes with
tok329 1749-1753 NNP denotes SARS
tok330 1753-1754 , denotes ,
tok331 1755-1758 NN denotes bat
tok332 1759-1763 NNP denotes SARS
tok333 1763-1764 , denotes ,
tok334 1765-1768 CC denotes and
tok335 1769-1773 NNP denotes MERS
tok336 1774-1778 NNP denotes CoVs
tok337 1778-1779 . denotes .