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PubMed:32020836 JSONTXT 18 Projects

Annnotations TAB TSV DIC JSON TextAE Lectin_function IAV-Glycan

Id Subject Object Predicate Lexical cue
tok1 0-3 NNP denotes RNA
tok2 4-9 VBD denotes based
tok3 10-14 NN denotes mNGS
tok4 15-23 NN denotes approach
tok5 24-34 VBZ denotes identifies
event16 24-34 OCCURRENCE denotes identifies
tok6 35-36 DT denotes a
tok7 37-42 NN denotes novel
tok8 43-48 JJ denotes human
tok9 49-60 JJ denotes coronavirus
tok10 61-65 IN denotes from
tok11 66-69 CD denotes two
lookup1 66-69 time denotes two
lookup2 66-69 number denotes two
tok12 70-80 JJ denotes individual
tok13 81-90 NN denotes pneumonia
tok14 91-96 NNS denotes cases
tok15 97-99 IN denotes in
lookup3 97-99 country_code denotes in
tok16 100-104 CD denotes 2019
lookup4 100-104 year denotes 2019
tok17 105-110 NNP denotes Wuhan
lookup5 105-110 location denotes Wuhan
tok18 111-119 NN denotes outbreak
tok19 119-120 . denotes .
tok20 121-125 IN denotes From
lookup6 121-125 stop denotes From
tok21 126-134 NNP denotes December
lookup7 126-134 date denotes December
tok22 135-139 CD denotes 2019
lookup8 135-139 year denotes 2019
tok23 139-140 , denotes ,
tok24 141-143 DT denotes an
lookup9 141-143 country_code denotes an
tok25 144-152 NN denotes outbreak
tok26 153-155 IN denotes of
tok27 156-163 JJ denotes unusual
tok28 164-173 NN denotes pneumonia
tok29 174-177 VBD denotes was
tok30 178-186 VBN denotes reported
event5 178-186 REPORTING denotes reported
tok31 187-189 IN denotes in
lookup10 187-189 country_code denotes in
tok32 190-195 NNP denotes Wuhan
lookup11 190-195 location denotes Wuhan
tok33 196-200 IN denotes with
tok34 201-205 JJ denotes many
tok35 206-211 NNS denotes cases
tok36 212-218 VBN denotes linked
event4 212-218 OCCURRENCE denotes linked
tok37 219-221 TO denotes to
lookup12 219-221 country_code denotes to
tok38 222-228 NNP denotes Huanan
tok39 229-236 NNP denotes Seafood
tok40 237-243 NNP denotes Market
tok41 244-248 WDT denotes that
tok42 249-254 VBZ denotes sells
tok43 255-262 NN denotes seafood
tok44 263-265 RB denotes as
lookup13 263-265 country_code denotes as
tok45 266-270 RB denotes well
tok46 271-273 IN denotes as
lookup14 271-273 country_code denotes as
tok47 274-278 VB denotes live
tok48 279-285 JJ denotes exotic
tok49 286-293 NNS denotes animals
tok50 293-294 . denotes .
tok51 295-297 PRP denotes We
lookup15 295-297 stop denotes We
tok52 298-310 VBD denotes investigated
event8 298-310 OCCURRENCE denotes investigated
tok53 311-314 CD denotes two
lookup16 311-314 time denotes two
lookup17 311-314 number denotes two
tok54 315-323 NNS denotes patients
tok55 324-327 WP denotes who
tok56 328-337 VBD denotes developed
event11 328-337 OCCURRENCE denotes developed
tok57 338-343 JJ denotes acute
tok58 344-355 JJ denotes respiratory
tok59 356-365 NNS denotes syndromes
tok60 366-371 IN denotes after
tok61 372-383 JJ denotes independent
tok62 384-391 NN denotes contact
tok63 392-399 NN denotes history
tok64 400-404 IN denotes with
tok65 405-409 DT denotes this
lookup18 405-409 time_modifier denotes this
tok66 410-416 NN denotes market
tok67 416-417 . denotes .
tok68 418-421 DT denotes The
tok69 422-425 CD denotes two
lookup19 422-425 time denotes two
lookup20 422-425 number denotes two
tok70 426-434 NNS denotes patients
tok71 435-441 VBD denotes shared
event13 435-441 OCCURRENCE denotes shared
tok72 442-448 JJ denotes common
tok73 449-457 JJ denotes clinical
tok74 458-466 NNS denotes features
tok75 467-476 VBG denotes including
tok76 477-482 NN denotes fever
tok77 482-483 , denotes ,
tok78 484-489 NN denotes cough
tok79 489-490 , denotes ,
tok80 491-494 CC denotes and
tok81 495-503 JJ denotes multiple
tok82 504-516 JJ denotes ground-glass
tok83 517-526 NNS denotes opacities
tok84 527-529 IN denotes in
lookup21 527-529 country_code denotes in
tok85 530-533 DT denotes the
tok86 534-543 JJ denotes bilateral
tok87 544-548 NN denotes lung
tok88 549-554 NN denotes field
tok89 555-559 IN denotes with
tok90 560-566 NN denotes patchy
tok91 567-579 NN denotes infiltration
tok92 579-580 . denotes .
tok93 581-585 RB denotes Here
lookup22 581-585 stop denotes Here
tok94 585-586 , denotes ,
tok95 587-589 PRP denotes we
tok96 590-599 VB denotes highlight
event3 590-599 OCCURRENCE denotes highlight
tok97 600-603 DT denotes the
tok98 604-607 NN denotes use
tok99 608-610 IN denotes of
tok100 611-612 DT denotes a
tok101 613-622 JJ denotes low-input
tok102 623-634 JJ denotes metagenomic
lookup23 635-639 time_modifier denotes next
tok103 635-650 JJ denotes next-generation
tok104 651-661 VBG denotes sequencing
tok105 662-663 ( denotes (
tok106 663-667 NN denotes mNGS
tok107 667-668 ) denotes )
tok108 669-677 NN denotes approach
tok109 678-680 IN denotes on
tok110 681-684 NNP denotes RNA
tok111 685-694 VBD denotes extracted
event9 685-694 OCCURRENCE denotes extracted
tok112 695-699 IN denotes from
tok113 700-715 NN denotes bronchoalveolar
tok114 716-722 NN denotes lavage
tok115 723-728 JJ denotes fluid
tok116 729-730 ( denotes (
tok117 730-734 NNP denotes BALF
tok118 734-735 ) denotes )
tok119 735-736 . denotes .
tok120 737-739 PRP denotes It
lookup24 737-739 stop denotes It
tok121 740-747 RB denotes rapidly
tok122 748-758 VBD denotes identified
event10 748-758 OCCURRENCE denotes identified
tok123 759-760 DT denotes a
tok124 761-766 NN denotes novel
tok125 767-778 JJ denotes coronavirus
tok126 779-780 ( denotes (
tok127 780-785 VBN denotes named
event1 780-785 I_ACTION denotes named
tok128 786-790 CD denotes 2019
lookup25 786-790 year denotes 2019
tok129 790-791 : denotes -
tok130 791-795 NN denotes nCoV
tok131 796-805 VBG denotes according
event15 796-805 REPORTING denotes according
tok132 806-808 TO denotes to
lookup26 806-808 country_code denotes to
tok133 809-814 NNP denotes World
lookup27 809-834 organization denotes World Health Organization
tok134 815-821 NNP denotes Health
tok135 822-834 NNP denotes Organization
lookup28 822-834 org_key denotes Organization
tok136 835-847 NN denotes announcement
tok137 847-848 ) denotes )
tok138 849-854 WDT denotes which
tok139 855-858 VBD denotes was
tok140 859-862 DT denotes the
tok141 863-867 JJ denotes sole
tok142 868-877 NNS denotes pathogens
tok143 878-880 IN denotes in
lookup29 878-880 country_code denotes in
tok144 881-884 DT denotes the
tok145 885-891 NN denotes sample
tok146 892-896 IN denotes with
tok147 897-901 RB denotes very
tok148 902-906 JJ denotes high
tok149 907-916 NN denotes abundance
tok150 917-922 NN denotes level
tok151 923-924 ( denotes (
tok152 924-925 CD denotes 1
tok153 925-926 . denotes .
tok154 926-927 CD denotes 5
tok155 927-928 NN denotes %
lookup30 927-928 percent denotes %
tok156 929-932 CC denotes and
tok157 933-934 CD denotes 0
tok158 934-935 . denotes .
tok159 935-937 CD denotes 62
tok160 937-938 NN denotes %
lookup31 937-938 percent denotes %
tok161 939-941 IN denotes of
tok162 942-947 JJ denotes total
tok163 948-951 NNP denotes RNA
tok164 952-961 JJ denotes sequenced
tok165 961-962 ) denotes )
tok166 962-963 . denotes .
tok167 964-967 DT denotes The
tok168 968-974 JJ denotes entire
tok169 975-980 JJ denotes viral
tok170 981-987 NN denotes genome
tok171 988-990 VBZ denotes is
lookup32 988-990 country_code denotes is
tok172 991-993 CD denotes 29
tok173 993-994 , denotes ,
tok174 994-997 CD denotes 881
tok175 998-1000 RB denotes nt
lookup33 998-1000 country_code denotes nt
tok176 1001-1003 IN denotes in
lookup34 1001-1003 country_code denotes in
tok177 1004-1010 NN denotes length
tok178 1011-1012 ( denotes (
tok179 1012-1019 NNP denotes GenBank
tok180 1020-1022 NNP denotes MN
lookup35 1020-1022 state denotes MN
tok181 1022-1028 CD denotes 988668
tok182 1029-1032 CC denotes and
tok183 1033-1035 NNP denotes MN
lookup36 1033-1035 state denotes MN
tok184 1035-1041 CD denotes 988669
tok185 1041-1042 , denotes ,
tok186 1043-1051 NNP denotes Sequence
tok187 1052-1056 NNP denotes Read
tok188 1057-1064 NNP denotes Archive
tok189 1065-1073 NN denotes database
tok190 1074-1084 NNP denotes Bioproject
tok191 1085-1094 NN denotes accession
tok192 1095-1100 NNP denotes PRJNA
tok193 1100-1106 CD denotes 601736
tok194 1106-1107 ) denotes )
tok195 1108-1111 CC denotes and
tok196 1112-1114 VBZ denotes is
lookup37 1112-1114 country_code denotes is
tok197 1115-1125 VBN denotes classified
event12 1115-1125 OCCURRENCE denotes classified
tok198 1126-1130 IN denotes into
tok199 1131-1144 JJ denotes β-coronavirus
tok200 1145-1150 JJ denotes genus
tok201 1150-1151 . denotes .
tok202 1152-1164 NNP denotes Phylogenetic
tok203 1165-1173 NN denotes analysis
tok204 1174-1183 VBZ denotes indicates
event6 1174-1183 OCCURRENCE denotes indicates
tok205 1184-1188 IN denotes that
tok206 1189-1193 CD denotes 2019
lookup38 1189-1193 year denotes 2019
tok207 1193-1194 : denotes -
tok208 1194-1198 NN denotes nCoV
tok209 1199-1201 VBZ denotes is
lookup39 1199-1201 country_code denotes is
tok210 1202-1207 JJ denotes close
tok211 1208-1210 TO denotes to
lookup40 1208-1210 country_code denotes to
tok212 1211-1224 NNS denotes coronaviruses
tok213 1225-1226 ( denotes (
tok214 1226-1230 NNP denotes CoVs
tok215 1230-1231 ) denotes )
tok216 1232-1243 VBG denotes circulating
event2 1232-1243 OCCURRENCE denotes circulating
tok217 1244-1246 IN denotes in
lookup41 1244-1246 country_code denotes in
tok218 1247-1258 NNP denotes Rhinolophus
tok219 1259-1260 ( denotes (
tok220 1260-1269 NNP denotes Horseshoe
tok221 1270-1274 NNS denotes bats
tok222 1274-1275 ) denotes )
tok223 1275-1276 , denotes ,
tok224 1277-1281 JJ denotes such
tok225 1282-1284 IN denotes as
lookup42 1282-1284 country_code denotes as
tok226 1285-1287 CD denotes 98
tok227 1287-1288 . denotes .
tok228 1288-1289 CD denotes 7
tok229 1289-1290 NN denotes %
lookup43 1289-1290 percent denotes %
tok230 1291-1301 NN denotes nucleotide
tok231 1302-1310 NN denotes identity
tok232 1311-1313 TO denotes to
lookup44 1311-1313 country_code denotes to
tok233 1314-1321 JJ denotes partial
tok234 1322-1326 NNP denotes RdRp
tok235 1327-1331 NN denotes gene
lookup45 1327-1331 person_first denotes gene
tok236 1332-1334 IN denotes of
tok237 1335-1338 NN denotes bat
tok238 1339-1350 JJ denotes coronavirus
tok239 1351-1357 NN denotes strain
tok240 1358-1363 NNP denotes BtCoV
tok241 1363-1364 NN denotes /
tok242 1364-1368 CD denotes 4991
tok243 1369-1370 ( denotes (
tok244 1370-1377 NNP denotes GenBank
tok245 1378-1380 NNP denotes KP
tok246 1380-1386 CD denotes 876546
tok247 1386-1387 , denotes ,
tok248 1388-1391 CD denotes 370
tok249 1392-1394 RB denotes nt
lookup46 1392-1394 country_code denotes nt
tok250 1395-1403 NN denotes sequence
tok251 1404-1406 IN denotes of
tok252 1407-1411 NNP denotes RdRp
tok253 1412-1415 CC denotes and
tok254 1416-1420 NN denotes lack
tok255 1421-1423 IN denotes of
tok256 1424-1429 JJ denotes other
tok257 1430-1436 NN denotes genome
tok258 1437-1445 NN denotes sequence
tok259 1445-1446 ) denotes )
tok260 1447-1450 CC denotes and
tok261 1451-1453 CD denotes 87
tok262 1453-1454 . denotes .
tok263 1454-1455 CD denotes 9
tok264 1455-1456 NN denotes %
lookup47 1455-1456 percent denotes %
tok265 1457-1467 NN denotes nucleotide
tok266 1468-1476 NN denotes identity
tok267 1477-1479 TO denotes to
lookup48 1477-1479 country_code denotes to
tok268 1480-1483 NN denotes bat
tok269 1484-1495 JJ denotes coronavirus
tok270 1496-1502 NN denotes strain
tok271 1503-1507 NN denotes bat-
tok272 1507-1515 NNP denotes SL-CoVZC
tok273 1515-1517 CD denotes 45
tok274 1518-1521 CC denotes and
tok275 1522-1526 NN denotes bat-
tok276 1526-1535 NNP denotes SL-CoVZXC
tok277 1535-1537 CD denotes 21
tok278 1537-1538 . denotes .
tok279 1539-1551 NNP denotes Evolutionary
tok280 1552-1560 NN denotes analysis
tok281 1561-1566 VBN denotes based
event14 1561-1566 OCCURRENCE denotes based
tok282 1567-1569 IN denotes on
tok283 1570-1573 NNP denotes ORF
tok284 1573-1574 CD denotes 1
tok285 1574-1575 DT denotes a
tok286 1575-1576 NN denotes /
tok287 1576-1577 CD denotes 1
tok288 1577-1578 SYM denotes b
tok289 1578-1579 , denotes ,
tok290 1580-1581 NNP denotes S
tok291 1581-1582 , denotes ,
tok292 1583-1586 CC denotes and
tok293 1587-1588 NNP denotes N
tok294 1589-1594 NNS denotes genes
tok295 1595-1599 RB denotes also
tok296 1600-1608 VBZ denotes suggests
tok297 1609-1613 CD denotes 2019
lookup49 1609-1613 year denotes 2019
tok298 1613-1614 : denotes -
tok299 1614-1618 NN denotes nCoV
tok300 1619-1621 VBZ denotes is
lookup50 1619-1621 country_code denotes is
tok301 1622-1626 RBR denotes more
tok302 1627-1633 JJ denotes likely
tok303 1634-1635 DT denotes a
tok304 1636-1641 JJ denotes novel
tok305 1642-1645 NNP denotes CoV
tok306 1646-1659 RB denotes independently
tok307 1660-1670 VBD denotes introduced
event7 1660-1670 OCCURRENCE denotes introduced
tok308 1671-1675 IN denotes from
tok309 1676-1683 NNS denotes animals
tok310 1684-1686 TO denotes to
lookup51 1684-1686 country_code denotes to
tok311 1687-1693 NNS denotes humans
tok312 1693-1694 . denotes .