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PubMed:32004758 JSONTXT 17 Projects

Annnotations TAB TSV DIC JSON TextAE Lectin_function IAV-Glycan

Id Subject Object Predicate Lexical cue
tok1 0-11 NNP denotes Full-genome
tok2 12-24 JJ denotes evolutionary
tok3 25-33 NN denotes analysis
tok4 34-36 IN denotes of
tok5 37-40 DT denotes the
tok6 41-46 NN denotes novel
tok7 47-53 NN denotes corona
tok8 54-59 NN denotes virus
tok9 60-61 ( denotes (
tok10 61-65 CD denotes 2019
lookup1 61-65 year denotes 2019
tok11 65-66 : denotes -
tok12 66-70 NN denotes nCoV
tok13 70-71 ) denotes )
tok14 72-79 VBZ denotes rejects
event6 72-79 OCCURRENCE denotes rejects
tok15 80-83 DT denotes the
tok16 84-94 NNS denotes hypothesis
tok17 95-97 IN denotes of
tok18 98-107 NN denotes emergence
tok19 108-110 IN denotes as
lookup2 108-110 country_code denotes as
tok20 111-112 DT denotes a
tok21 113-119 NN denotes result
tok22 120-122 IN denotes of
tok23 123-124 DT denotes a
tok24 125-131 JJ denotes recent
tok25 132-145 NN denotes recombination
tok26 146-151 NN denotes event
tok27 151-152 . denotes .
tok28 153-163 NNP denotes BACKGROUND
tok29 163-164 : denotes :
tok30 165-166 DT denotes A
tok31 167-172 NN denotes novel
tok32 173-184 JJ denotes coronavirus
tok33 185-186 ( denotes (
tok34 186-190 CD denotes 2019
lookup3 186-190 year denotes 2019
tok35 190-191 : denotes -
tok36 191-195 NN denotes nCoV
tok37 195-196 ) denotes )
tok38 197-207 VBN denotes associated
tok39 208-212 IN denotes with
tok40 213-218 JJ denotes human
tok41 219-221 TO denotes to
lookup4 219-221 country_code denotes to
tok42 222-227 JJ denotes human
tok43 228-240 NN denotes transmission
tok44 241-244 CC denotes and
tok45 245-251 JJ denotes severe
tok46 252-257 JJ denotes human
tok47 258-267 NN denotes infection
tok48 268-271 VBZ denotes has
tok49 272-276 VBN denotes been
tok50 277-285 RB denotes recently
tok51 286-294 VBN denotes reported
event4 286-294 REPORTING denotes reported
tok52 295-299 IN denotes from
tok53 300-303 DT denotes the
tok54 304-308 NN denotes city
lookup5 304-308 loc_general_key denotes city
tok55 309-311 IN denotes of
tok56 312-317 NNP denotes Wuhan
lookup6 312-317 location denotes Wuhan
tok57 318-320 IN denotes in
lookup7 318-320 country_code denotes in
tok58 321-326 NNP denotes China
lookup8 321-326 location denotes China
tok59 326-327 . denotes .
tok60 328-331 PRP$ denotes Our
tok61 332-342 NNS denotes objectives
tok62 343-347 VBD denotes were
tok63 348-350 TO denotes to
lookup9 348-350 country_code denotes to
tok64 351-363 VB denotes characterize
event1 351-363 OCCURRENCE denotes characterize
tok65 364-367 DT denotes the
tok66 368-375 JJ denotes genetic
tok67 376-389 NNS denotes relationships
tok68 390-392 IN denotes of
tok69 393-396 DT denotes the
tok70 397-401 CD denotes 2019
lookup10 397-401 year denotes 2019
tok71 401-402 : denotes -
tok72 402-406 NN denotes nCoV
tok73 407-410 CC denotes and
tok74 411-413 TO denotes to
lookup11 411-413 country_code denotes to
tok75 414-420 VB denotes search
event18 414-420 OCCURRENCE denotes search
tok76 421-424 IN denotes for
tok77 425-433 JJ denotes putative
tok78 434-447 NN denotes recombination
tok79 448-454 IN denotes within
tok80 455-458 DT denotes the
tok81 459-467 JJ denotes subgenus
tok82 468-470 IN denotes of
tok83 471-483 JJ denotes sarbecovirus
tok84 483-484 . denotes .
tok85 485-492 NNP denotes METHODS
tok86 492-493 : denotes :
tok87 494-502 NNP denotes Putative
tok88 503-516 NN denotes recombination
tok89 517-520 VBD denotes was
tok90 521-533 VBN denotes investigated
event22 521-533 OCCURRENCE denotes investigated
tok91 534-536 IN denotes by
lookup12 534-536 country_code denotes by
tok92 537-540 NNP denotes RDP
tok93 540-541 CD denotes 4
tok94 542-545 CC denotes and
tok95 546-553 NNP denotes Simplot
tok96 554-555 NN denotes v
tok97 555-556 CD denotes 3
tok98 556-557 . denotes .
tok99 557-558 CD denotes 5
tok100 558-559 . denotes .
tok101 559-560 CD denotes 1
tok102 561-564 CC denotes and
tok103 565-575 JJ denotes discordant
tok104 576-588 JJ denotes phylogenetic
tok105 589-599 VBG denotes clustering
event5 589-599 OCCURRENCE denotes clustering
tok106 600-602 IN denotes in
lookup13 600-602 country_code denotes in
tok107 603-613 JJ denotes individual
tok108 614-621 JJ denotes genomic
tok109 622-631 NNS denotes fragments
tok110 632-635 VBD denotes was
tok111 636-645 VBN denotes confirmed
event9 636-645 REPORTING denotes confirmed
tok112 646-648 IN denotes by
lookup14 646-648 country_code denotes by
tok113 649-661 JJ denotes phylogenetic
tok114 662-670 NN denotes analysis
tok115 671-676 VBG denotes using
event13 671-676 OCCURRENCE denotes using
tok116 677-684 NN denotes maximum
tok117 685-695 NN denotes likelihood
tok118 696-699 CC denotes and
tok119 700-708 NNP denotes Bayesian
tok120 709-716 NNS denotes methods
tok121 716-717 . denotes .
tok122 718-725 NNP denotes RESULTS
tok123 725-726 : denotes :
tok124 727-730 PRP$ denotes Our
tok125 731-739 NN denotes analysis
tok126 740-748 VBZ denotes suggests
event19 740-748 OCCURRENCE denotes suggests
tok127 749-753 IN denotes that
tok128 754-757 DT denotes the
tok129 758-762 CD denotes 2019
lookup15 758-762 year denotes 2019
tok130 762-763 : denotes -
tok131 763-767 NN denotes nCoV
tok132 768-776 IN denotes although
tok133 777-784 RB denotes closely
tok134 785-792 VBN denotes related
tok135 793-795 TO denotes to
lookup16 793-795 country_code denotes to
tok136 796-802 NNP denotes BatCoV
tok137 803-807 NNP denotes RaTG
tok138 807-809 CD denotes 13
tok139 810-818 NN denotes sequence
tok140 819-829 IN denotes throughout
tok141 830-833 DT denotes the
tok142 834-840 NN denotes genome
tok143 841-842 ( denotes (
tok144 842-850 NN denotes sequence
tok145 851-861 NN denotes similarity
tok146 862-864 CD denotes 96
tok147 864-865 . denotes .
tok148 865-866 CD denotes 3
tok149 866-867 NN denotes %
lookup17 866-867 percent denotes %
tok150 867-868 ) denotes )
tok151 868-869 , denotes ,
tok152 870-875 VBZ denotes shows
event15 870-875 OCCURRENCE denotes shows
tok153 876-886 JJ denotes discordant
tok154 887-897 VBG denotes clustering
event16 887-897 OCCURRENCE denotes clustering
tok155 898-902 IN denotes with
tok156 903-906 DT denotes the
tok157 907-910 NNP denotes Bat
tok158 910-911 NN denotes _
tok159 911-920 NNP denotes SARS-like
tok160 921-932 JJ denotes coronavirus
tok161 933-942 NNS denotes sequences
tok162 942-943 . denotes .
tok163 944-956 RB denotes Specifically
tok164 956-957 , denotes ,
tok165 958-960 IN denotes in
lookup18 958-960 country_code denotes in
tok166 961-964 DT denotes the
tok167 965-966 CD denotes 5
tok168 966-967 POS denotes '
tok169 967-968 : denotes -
tok170 968-972 NN denotes part
tok171 973-981 VBG denotes spanning
event3 973-981 OCCURRENCE denotes spanning
tok172 982-985 DT denotes the
tok173 986-991 JJ denotes first
lookup19 986-991 date denotes first
tok174 992-994 CD denotes 11
tok175 994-995 , denotes ,
tok176 995-998 CD denotes 498
tok177 999-1010 NNS denotes nucleotides
tok178 1011-1014 CC denotes and
tok179 1015-1018 DT denotes the
tok180 1019-1023 JJ denotes last
lookup20 1019-1023 time_modifier denotes last
tok181 1024-1025 CD denotes 3
tok182 1025-1026 POS denotes '
tok183 1026-1027 : denotes -
tok184 1027-1031 NN denotes part
tok185 1032-1040 VBG denotes spanning
event12 1032-1040 OCCURRENCE denotes spanning
tok186 1041-1043 CD denotes 24
tok187 1043-1044 , denotes ,
tok188 1044-1047 CD denotes 341
tok189 1047-1048 : denotes -
tok190 1048-1050 CD denotes 30
tok191 1050-1051 , denotes ,
tok192 1051-1054 CD denotes 696
tok193 1055-1064 NNS denotes positions
tok194 1064-1065 , denotes ,
tok195 1066-1070 CD denotes 2019
lookup21 1066-1070 year denotes 2019
tok196 1070-1071 : denotes -
tok197 1071-1075 NN denotes nCoV
tok198 1076-1079 CC denotes and
tok199 1080-1084 NNP denotes RaTG
tok200 1084-1086 CD denotes 13
tok201 1087-1093 VBD denotes formed
event11 1087-1093 OCCURRENCE denotes formed
tok202 1094-1095 DT denotes a
tok203 1096-1102 JJ denotes single
tok204 1103-1110 NN denotes cluster
tok205 1111-1115 IN denotes with
tok206 1116-1119 NNP denotes Bat
tok207 1119-1120 NN denotes _
tok208 1120-1129 NNP denotes SARS-like
tok209 1130-1141 JJ denotes coronavirus
tok210 1142-1151 NNS denotes sequences
tok211 1151-1152 , denotes ,
tok212 1153-1160 IN denotes whereas
tok213 1161-1163 IN denotes in
lookup22 1161-1163 country_code denotes in
tok214 1164-1167 DT denotes the
tok215 1168-1174 JJ denotes middle
tok216 1175-1181 NN denotes region
tok217 1182-1190 VBG denotes spanning
event8 1182-1190 OCCURRENCE denotes spanning
tok218 1191-1194 DT denotes the
tok219 1195-1196 CD denotes 3
tok220 1196-1197 POS denotes '
tok221 1197-1198 : denotes -
tok222 1198-1201 NN denotes end
tok223 1202-1204 IN denotes of
tok224 1205-1208 NNP denotes ORF
tok225 1208-1209 CD denotes 1
tok226 1209-1210 DT denotes a
tok227 1210-1211 , denotes ,
tok228 1212-1215 DT denotes the
tok229 1216-1219 NNP denotes ORF
tok230 1219-1220 CD denotes 1
tok231 1220-1221 SYM denotes b
tok232 1222-1225 CC denotes and
tok233 1226-1232 RB denotes almost
tok234 1233-1237 NN denotes half
lookup23 1233-1237 date_unit denotes half
tok235 1238-1240 IN denotes of
tok236 1241-1244 DT denotes the
tok237 1245-1250 NN denotes spike
tok238 1251-1258 NNS denotes regions
tok239 1258-1259 , denotes ,
tok240 1260-1264 CD denotes 2019
lookup24 1260-1264 year denotes 2019
tok241 1264-1265 : denotes -
tok242 1265-1269 NN denotes nCoV
tok243 1270-1273 CC denotes and
tok244 1274-1278 NNP denotes RaTG
tok245 1278-1280 CD denotes 13
tok246 1281-1288 VBN denotes grouped
event7 1281-1288 OCCURRENCE denotes grouped
tok247 1289-1291 IN denotes in
lookup25 1289-1291 country_code denotes in
tok248 1292-1293 DT denotes a
tok249 1294-1302 JJ denotes separate
tok250 1303-1310 JJ denotes distant
tok251 1311-1318 NN denotes lineage
tok252 1319-1325 IN denotes within
tok253 1326-1329 DT denotes the
tok254 1330-1342 JJ denotes sarbecovirus
tok255 1343-1349 NN denotes branch
tok256 1349-1350 . denotes .
tok257 1351-1362 NNP denotes CONCLUSIONS
tok258 1362-1363 : denotes :
tok259 1364-1367 DT denotes The
tok260 1368-1374 NNS denotes levels
tok261 1375-1377 IN denotes of
tok262 1378-1385 JJ denotes genetic
tok263 1386-1396 NN denotes similarity
tok264 1397-1404 IN denotes between
tok265 1405-1408 DT denotes the
tok266 1409-1413 CD denotes 2019
lookup26 1409-1413 year denotes 2019
tok267 1413-1414 : denotes -
tok268 1414-1418 NN denotes nCoV
tok269 1419-1422 CC denotes and
tok270 1423-1427 NNP denotes RaTG
tok271 1427-1429 CD denotes 13
tok272 1430-1437 VBP denotes suggest
event23 1430-1437 I_STATE denotes suggest
tok273 1438-1442 IN denotes that
tok274 1443-1446 DT denotes the
tok275 1447-1453 JJ denotes latter
tok276 1454-1458 VBZ denotes does
event14 1454-1458 OCCURRENCE denotes does
tok277 1459-1462 RB denotes not
tok278 1463-1470 VB denotes provide
event10 1463-1470 OCCURRENCE denotes provide
tok279 1471-1474 DT denotes the
tok280 1475-1480 JJ denotes exact
tok281 1481-1488 NN denotes variant
tok282 1489-1493 WDT denotes that
tok283 1494-1500 VBD denotes caused
event21 1494-1500 OCCURRENCE denotes caused
tok284 1501-1504 DT denotes the
tok285 1505-1513 NN denotes outbreak
tok286 1514-1516 IN denotes in
lookup27 1514-1516 country_code denotes in
tok287 1517-1523 NNS denotes humans
tok288 1523-1524 , denotes ,
tok289 1525-1528 CC denotes but
tok290 1529-1532 DT denotes the
tok291 1533-1543 NNS denotes hypothesis
tok292 1544-1548 IN denotes that
tok293 1549-1553 CD denotes 2019
lookup28 1549-1553 year denotes 2019
tok294 1553-1554 : denotes -
tok295 1554-1558 NN denotes nCoV
tok296 1559-1562 VBZ denotes has
tok297 1563-1573 VBN denotes originated
event17 1563-1573 OCCURRENCE denotes originated
tok298 1574-1578 IN denotes from
tok299 1579-1583 NNS denotes bats
tok300 1584-1586 VBZ denotes is
lookup29 1584-1586 country_code denotes is
tok301 1587-1591 RB denotes very
tok302 1592-1598 JJ denotes likely
tok303 1598-1599 . denotes .
tok304 1600-1602 PRP denotes We
lookup30 1600-1602 stop denotes We
tok305 1603-1607 VBP denotes show
tok306 1608-1616 NN denotes evidence
tok307 1617-1621 IN denotes that
tok308 1622-1625 DT denotes the
tok309 1626-1631 NN denotes novel
tok310 1632-1643 JJ denotes coronavirus
tok311 1644-1645 ( denotes (
tok312 1645-1649 CD denotes 2019
lookup31 1645-1649 year denotes 2019
tok313 1649-1650 : denotes -
tok314 1650-1654 NN denotes nCov
tok315 1654-1655 ) denotes )
tok316 1656-1658 VBZ denotes is
lookup32 1656-1658 country_code denotes is
tok317 1659-1669 JJ denotes not-mosaic
tok318 1670-1680 VBG denotes consisting
event2 1670-1680 OCCURRENCE denotes consisting
tok319 1681-1683 IN denotes in
lookup33 1681-1683 country_code denotes in
tok320 1684-1690 RB denotes almost
tok321 1691-1695 NN denotes half
lookup34 1691-1695 date_unit denotes half
tok322 1696-1698 IN denotes of
tok323 1699-1702 PRP$ denotes its
tok324 1703-1709 NN denotes genome
tok325 1710-1712 IN denotes of
tok326 1713-1714 DT denotes a
tok327 1715-1723 JJ denotes distinct
tok328 1724-1731 NN denotes lineage
tok329 1732-1738 IN denotes within
tok330 1739-1742 DT denotes the
tok331 1743-1758 JJ denotes betacoronavirus
tok332 1758-1759 . denotes .
tok333 1760-1765 DT denotes These
tok334 1766-1773 JJ denotes genomic
tok335 1774-1782 NNS denotes features
tok336 1783-1786 CC denotes and
tok337 1787-1792 PRP$ denotes their
tok338 1793-1802 JJ denotes potential
tok339 1803-1814 NN denotes association
tok340 1815-1819 IN denotes with
tok341 1820-1825 NN denotes virus
tok342 1826-1841 NNS denotes characteristics
tok343 1842-1845 CC denotes and
tok344 1846-1855 NN denotes virulence
tok345 1856-1858 IN denotes in
lookup35 1856-1858 country_code denotes in
tok346 1859-1865 NNS denotes humans
tok347 1866-1870 VBP denotes need
event20 1866-1870 OCCURRENCE denotes need
tok348 1871-1878 JJ denotes further
tok349 1879-1888 NN denotes attention
tok350 1888-1889 . denotes .