LitCovid-PubTator  

PMC:7784834 / 1861-35608 JSONTXT 2 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue tao:has_database_id tao:has_standard_notation
48 48-53 Species denotes human Tax:9606
49 54-67 Species denotes coronaviruses Tax:11118
50 94-99 Species denotes human Tax:9606
51 121-166 Species denotes severe acute respiratory syndrome coronavirus Tax:694009
52 168-176 Species denotes SARS-CoV Tax:694009
60 281-289 Disease denotes infected MESH:D007239
53 391-446 Species denotes middle east respiratory syndrome coronavirus (MERS-CoV) Tax:1335626
61 490-498 Disease denotes infected MESH:D007239
54 591-599 Species denotes SARS-CoV Tax:694009
55 638-648 Species denotes SARS-CoV-2 Tax:2697049
62 652-660 Disease denotes COVID-19 MESH:C000657245
56 738-743 Species denotes human Tax:9606
57 747-752 Species denotes human Tax:9606
58 786-796 Species denotes SARS-CoV-2 Tax:2697049
59 868-874 Species denotes people Tax:9606
63 875-883 Disease denotes infected MESH:D007239
64 995-1003 Disease denotes Covid-19 MESH:C000657245
65 1127-1132 Disease denotes death MESH:D003643
47 1177-1180 Gene denotes Oct Gene:5362
101 1202-1210 Species denotes SARS-CoV Tax:694009
102 1215-1223 Species denotes MERS-CoV Tax:1335626
103 1225-1235 Species denotes SARS-CoV-2 Tax:2697049
104 1343-1359 Species denotes beta coronavirus Tax:694002
105 1368-1381 Species denotes Coronaviridae Tax:11118
106 1588-1594 Species denotes humans Tax:9606
107 1625-1635 Species denotes SARS-CoV-2 Tax:2697049
88 1804-1805 Gene denotes N Gene:43740575
89 1904-1905 Gene denotes M Gene:43740571
90 1968-1973 Gene denotes spike Gene:43740568
100 2388-2393 Gene denotes spike Gene:43740568
108 2468-2472 Species denotes CoVs Tax:11118
109 2529-2544 Species denotes β coronaviruses Tax:694002
91 3475-3506 Gene denotes angiotensin-converting enzyme 2 Gene:59272
92 3508-3512 Gene denotes ACE2 Gene:59272
93 3515-3532 Gene denotes amino peptidase N Gene:290
94 3534-3537 Gene denotes APN Gene:290
95 3540-3562 Gene denotes dipeptidyl peptidase 4 Gene:1803
96 3564-3568 Gene denotes DPP4 Gene:1803
97 3571-3628 Gene denotes carcinoembryonic antigen-related cell adhesion molecule 1 Gene:634
98 3630-3637 Gene denotes CEACAM1 Gene:634
99 3677-3682 Gene denotes spike Gene:43740568
127 4379-4382 Gene denotes Nsp Gene:43740578
143 4481-4490 Disease denotes infection MESH:D007239
141 4609-4619 Species denotes SARS-Cov-2 Tax:2697049
128 4697-4701 Gene denotes Nsp5 Gene:92521
129 4713-4717 Gene denotes Mpro Gene:8673700
130 4721-4725 Gene denotes Nsp5 Gene:92521
131 4807-4812 Gene denotes Plpro Gene:43740578
138 4928-4932 Gene denotes Mpro Gene:8673700
140 4944-4949 Gene denotes Plpro Gene:43740578
139 5000-5003 Gene denotes Nsp Gene:43740578
137 5011-5015 Gene denotes Mpro Gene:8673700
132 5075-5079 Gene denotes Nsp4 Gene:43740578
133 5140-5144 Gene denotes Mpro Gene:8673700
134 5199-5203 Gene denotes Mpro Gene:8673700
136 5477-5481 Gene denotes Mpro Gene:8673700
142 5651-5656 Species denotes human Tax:9606
135 5672-5676 Gene denotes Mpro Gene:8673700
158 6531-6540 Chemical denotes remdesvir
159 6542-6551 Chemical denotes ribavirin MESH:D012254
160 6553-6564 Chemical denotes favipiravir MESH:C462182
161 6566-6577 Chemical denotes chloroquine MESH:D002738
162 6579-6597 Chemical denotes hydroxychloroquine MESH:D006886
163 6599-6610 Chemical denotes oseltamivir MESH:D053139
164 6615-6625 Chemical denotes umifenovir MESH:C086979
165 6661-6671 Chemical denotes toclizumab
166 6708-6720 Chemical denotes azithromycin MESH:D017963
167 6772-6780 Disease denotes COVID-19 MESH:C000657245
157 7305-7315 Species denotes SARS-CoV-2 Tax:2697049
156 7316-7321 Gene denotes spike Gene:43740568
179 7705-7710 Gene denotes spike Gene:43740568
180 7758-7768 Species denotes SARS-CoV-2 Tax:2697049
187 7812-7820 Disease denotes COVID-19 MESH:C000657245
188 7821-7830 Disease denotes infection MESH:D007239
181 7973-7976 Species denotes SAR Tax:2698737
182 7977-7982 Species denotes CoV-2 Tax:2697049
183 7983-7988 Gene denotes spike Gene:43740568
189 8054-8057 CellLine denotes LU7 CVCL:M631
184 8402-8410 Chemical denotes hydrogen MESH:D006859
185 8484-8493 Chemical denotes disulfide MESH:D004220
186 8517-8522 Chemical denotes water MESH:D014867
191 9636-9641 Gene denotes spike Gene:43740568
196 10443-10448 Gene denotes spike Gene:43740568
197 10478-10481 Species denotes SAR Tax:2698737
198 10482-10487 Species denotes CoV-2 Tax:2697049
199 11170-11190 Disease denotes SARS-CoV-2 infection MESH:C000657245
213 11278-11288 Species denotes SARS-CoV-2 Tax:2697049
209 11289-11294 Gene denotes spike Gene:43740568
214 11542-11547 Chemical denotes water MESH:D014867
215 11786-11791 Chemical denotes water MESH:D014867
210 11843-11848 Gene denotes spike Gene:43740568
212 11933-11951 Gene denotes –6, –4, –6, and –4
216 12044-12049 Chemical denotes water MESH:D014867
211 12446-12451 Gene denotes spike Gene:43740568
217 12503-12508 Chemical denotes rutin MESH:D012431
221 13207-13208 Gene denotes τ Gene:4137
222 13249-13250 Gene denotes τ Gene:4137
223 13464-13472 Chemical denotes hydrogen MESH:D006859
227 14866-14874 Chemical denotes hydrogen MESH:D006859
226 15064-15069 Gene denotes spike Gene:43740568
230 15359-15364 Gene denotes spike Gene:43740568
231 16027-16030 Disease denotes VMD
243 16127-16137 Species denotes SARS-CoV-2 Tax:2697049
247 16288-16297 Disease denotes infection MESH:D007239
240 16461-16466 Gene denotes spike Gene:43740568
244 16496-16506 Species denotes SARS-CoV-2 Tax:2697049
241 16701-16706 Gene denotes Spike Gene:43740568
246 16948-16957 Chemical denotes glutamine MESH:D005973
245 17054-17059 Species denotes human Tax:9606
242 17163-17168 Gene denotes spike Gene:43740568
254 17518-17523 Gene denotes spike Gene:43740568
255 17701-17706 Gene denotes spike Gene:43740568
259 17791-17802 Mutation denotes Q271-T274,C c.271,274,Q,T>C
257 17891-17900 CellLine denotes F515-H519 CVCL:V775
258 17916-17925 CellLine denotes N540-T549 CVCL:0023
256 18219-18222 Gene denotes H41 Gene:55573
261 18345-18350 Gene denotes spike Gene:43740568
293 18505-18515 Species denotes SARS-CoV-2 Tax:2697049
285 18516-18521 Gene denotes spike Gene:43740568
294 19206-19216 Species denotes SARS-CoV-2 Tax:2697049
286 19291-19296 Gene denotes spike Gene:43740568
298 19400-19405 Chemical denotes Rutin MESH:D012431
299 19407-19456 Chemical denotes 3,3′,4′,5,7-pentahydroxyflavone-3-rhamnoglucoside
300 19473-19481 Chemical denotes flavonol MESH:C041477
295 19540-19549 Species denotes buckwheat Tax:3617
296 19551-19556 Species denotes apple Tax:3750
287 20228-20233 Gene denotes spike Gene:43740568
301 20273-20281 Chemical denotes hydrogen MESH:D006859
302 20439-20447 Chemical denotes hydrogen MESH:D006859
288 20472-20477 Gene denotes spike Gene:43740568
307 20491-20495 CellLine denotes F970 CVCL:7312
303 20729-20737 Chemical denotes hydrogen MESH:D006859
292 20802-20805 Gene denotes H41 Gene:55573
304 21049-21053 Chemical denotes E166
305 21061-21065 Chemical denotes N142
289 21067-21070 Gene denotes H41 Gene:55573
306 21308-21313 Chemical denotes rutin MESH:D012431
290 21369-21374 Gene denotes spike Gene:43740568
291 21542-21547 Gene denotes spike Gene:43740568
297 21590-21600 Species denotes SARS-CoV-2 Tax:2697049
310 21652-21657 Gene denotes spike Gene:43740568
311 21741-21749 Chemical denotes hydrogen MESH:D006859
315 21934-21942 Chemical denotes hydrogen MESH:D006859
314 22004-22009 Gene denotes spike Gene:43740568
321 22166-22170 CellLine denotes HNE2 CVCL:0308
322 22242-22246 CellLine denotes HOE1 CVCL:4J71
323 22292-22296 CellLine denotes HOG1 CVCL:D354
320 22367-22368 Gene denotes N Gene:43740575
325 22426-22434 Chemical denotes hydrogen MESH:D006859
333 22656-22658 CellLine denotes HO CVCL:M698
334 22743-22745 CellLine denotes HO CVCL:M698
335 22872-22876 CellLine denotes HOD1 CVCL:B526
336 22920-22924 CellLine denotes HOD1 CVCL:B526
337 22966-22968 CellLine denotes HO CVCL:M698
338 23011-23013 CellLine denotes HO CVCL:M698
339 23057-23059 CellLine denotes HO CVCL:M698
341 23110-23115 Gene denotes spike Gene:43740568
363 23199-23204 Chemical denotes rutin MESH:D012431
355 23218-23223 Gene denotes spike Gene:43740568
356 23326-23331 Gene denotes spike Gene:43740568
365 23580-23594 Disease denotes backbone atoms
366 23711-23725 Disease denotes backbone atoms
360 23748-23755 Species denotes C-alpha Tax:342041
357 24111-24116 Gene denotes spike Gene:43740568
359 24129-24134 Gene denotes spike Gene:43740568
358 24246-24251 Gene denotes spike Gene:43740568
364 24270-24275 Chemical denotes rutin MESH:D012431
361 24707-24714 Species denotes C-alpha Tax:342041
367 24775-24797 Disease denotes RMSD of backbone atoms
362 24865-24872 Species denotes C-alpha Tax:342041
370 25026-25031 Gene denotes spike Gene:43740568
371 25133-25147 Disease denotes backbone atoms
373 25446-25460 Disease denotes backbone atoms
378 26175-26180 Gene denotes spike Gene:43740568
381 26230-26235 Gene denotes spike Gene:43740568
380 26677-26682 Gene denotes spike Gene:43740568
379 27071-27076 Gene denotes spike Gene:43740568
391 27308-27313 Gene denotes spike Gene:43740568
392 27472-27477 Gene denotes spike Gene:43740568
393 27646-27651 Gene denotes spike Gene:43740568
394 28142-28143 Gene denotes N Gene:43740575
395 28145-28150 Gene denotes spike Gene:43740568
399 28163-28164 Gene denotes N Gene:43740575
396 28166-28171 Gene denotes spike Gene:43740568
398 28190-28191 Gene denotes N Gene:43740575
397 28223-28224 Gene denotes N Gene:43740575
404 28583-28588 Gene denotes spike Gene:43740568
405 28954-28959 Gene denotes spike Gene:43740568
406 29318-29323 Gene denotes spike Gene:43740568
407 29453-29458 Gene denotes spike Gene:43740568
410 29716-29721 Chemical denotes rutin MESH:D012431
411 29884-29889 Chemical denotes rutin MESH:D012431
413 30030-30035 Chemical denotes rutin MESH:D012431
436 30109-30117 Chemical denotes hydrogen MESH:D006859
437 30160-30168 Chemical denotes hydrogen MESH:D006859
438 30196-30201 Chemical denotes water MESH:D014867
431 30223-30228 Gene denotes spike Gene:43740568
439 30243-30251 Chemical denotes hydrogen MESH:D006859
440 30307-30315 Chemical denotes hydrogen MESH:D006859
441 30365-30373 Chemical denotes hydrogen MESH:D006859
442 30402-30410 Chemical denotes hydrogen MESH:D006859
443 30495-30503 Chemical denotes hydrogen MESH:D006859
444 30635-30643 Chemical denotes hydrogen MESH:D006859
445 30700-30708 Chemical denotes hydrogen MESH:D006859
433 30722-30727 Gene denotes spike Gene:43740568
446 30817-30825 Chemical denotes hydrogen MESH:D006859
435 30936-30941 Gene denotes spike Gene:43740568
432 31001-31006 Gene denotes spike Gene:43740568
447 31313-31321 Chemical denotes hydrogen MESH:D006859
434 31391-31396 Gene denotes spike Gene:43740568
451 31484-31492 Chemical denotes hydrogen MESH:D006859
452 31710-31718 Chemical denotes hydrogen MESH:D006859
453 31756-31761 Chemical denotes rutin MESH:D012431
465 32030-32040 Species denotes SARS-CoV-2 Tax:2697049
468 32087-32095 Disease denotes COVID-19 MESH:C000657245
469 32182-32188 Disease denotes deaths MESH:D003643
466 32309-32319 Species denotes SARS-CoV-2 Tax:2697049
462 32342-32347 Gene denotes spike Gene:43740568
467 32672-32682 Species denotes SARS-CoV-2 Tax:2697049
463 32683-32688 Gene denotes spike Gene:43740568
464 32761-32766 Gene denotes spike Gene:43740568
476 32898-32903 Chemical denotes rutin MESH:D012431
474 33032-33037 Gene denotes spike Gene:43740568
477 33235-33243 Chemical denotes hydrogen MESH:D006859
475 33631-33641 Species denotes SARS-CoV-2 Tax:2697049