Covid19_manual_annotation  

PubMed:33501438 JSONTXT 3 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue tao:has_database_id tao:has_standard_notation
T15 24-39 Species denotes Betacoronavirus Tax:694002
T27 40-47 Bind denotes binding
T16 122-146 Species denotes SARS-CoV-2 variant N501Y MESH:C000711908
T20 187-207 Bind denotes binding interactions
T14 224-239 Species denotes Betacoronavirus Tax:694002
T18 240-254 Species denotes mutant strains
T13 284-289 Species denotes human Tax:9606
T19 290-305 Biological denotes target proteins
T17 354-373 Disease denotes zoonotic spillovers MESH:D000086965
T12 410-418 Disease denotes COVID-19 MESH:C000657245
T25 499-529 Method denotes molecular dynamics simulations
T4 572-576 Gene denotes ACE2 Gene:59272
T22 581-585 Gene denotes CD26 Gene:1803
T9 669-692 Biological denotes receptor binding domain
T10 694-697 Biological denotes RBD
T21 706-726 Gene denotes S spike glycoprotein Gene:43740568
T32 761-782 Condition denotes universally conserved
T26 794-801 Bind denotes binding
T33 819-824 Species denotes viral
T11 825-828 Biological denotes RBD
T34 838-856 Biological denotes N-terminal helices
T5 860-864 Gene denotes ACE2 Gene:59272
T58 909-918 Condition denotes transient
T57 919-930 Bind denotes interaction
T35 938-943 Species denotes viral
T36 944-948 Position denotes N501 p.N501
T6 979-983 Gene denotes ACE2 Gene:59272
T37 984-988 Position denotes K353 p.K353
T38 1017-1021 Position denotes Q325 p.Q325
T40 1030-1037 Biological denotes AAQPFLL
T39 1038-1044 Position denotes 386-92 p.386-392
T41 1045-1050 Biological denotes motif
T61 1102-1111 Species denotes SARS-type
T42 1112-1131 Disease denotes zoonotic spillovers MESH:D000086965
T30 1163-1182 Bind denotes binding interaction
T60 1163-1182 Bind denotes binding interaction
T43 1192-1210 Biological denotes N-terminal helices
T7 1214-1218 Gene denotes ACE2 Gene:59272
T55 1268-1296 Species denotes Tylonycteris bat coronavirus Tax:694007
T56 1315-1319 Species denotes HKU4 Tax:694007
T44 1329-1334 Biological denotes SAMLI
T46 1335-1340 Position denotes 291-5 p.291-295
T45 1341-1346 Biological denotes motif
T23 1358-1362 Gene denotes CD26 Gene:1803
T62 1416-1427 Bind denotes interaction
T50 1436-1441 Species denotes viral
T51 1442-1446 Position denotes N501 p.N501
T63 1455-1487 Position denotes above-mentioned multiple regions
T8 1491-1495 Gene denotes ACE2 Gene:59272
T59 1524-1533 Species denotes bat viral
T64 1534-1545 Bind denotes interaction
T24 1553-1557 Gene denotes CD26 Gene:1803
T48 1558-1560 Biological denotes SS
T47 1561-1566 Position denotes 333-4 p.333-334
T49 1567-1572 Biological denotes motif
T52 1622-1643 Species denotes N501Y lineage B.1.1.7 MESH:C000711908
T66 1644-1652 Mutation denotes mutation
T2 1656-1666 Species denotes SARS-CoV-2 Tax:2697049
T54 1724-1728 Position denotes Y501 p.Y501
T65 1729-1740 Bind denotes interaction
T3 1746-1750 Gene denotes ACE2 Gene:59272
T67 1763-1774 PositiveRegulation denotes more stable
T31 1786-1793 Bind denotes binding
T53 1803-1807 Position denotes K353 p.K353
T68 1813-1818 Disease denotes alone
R1 T17 T12 cause_of zoonotic spillovers,COVID-19
R10 T11 T26 of_a RBD,binding
R11 T5 T26 to ACE2,binding
R12 T5 T34 of_a ACE2,N-terminal helices
R13 T33 T11 of_a viral,RBD
R14 T40 T41 - AAQPFLL,motif
R15 T48 T49 - SS,motif
R16 T44 T45 - SAMLI,motif
R17 T55 T56 - Tylonycteris bat coronavirus,HKU4
R18 T35 T36 of_a viral,N501
R19 T6 T37 of_a ACE2,K353
R2 T14 T18 of_a Betacoronavirus,mutant strains
R20 T6 T38 of_a ACE2,Q325
R21 T6 T39 of_a ACE2,386-92
R22 T50 T51 of_a viral,N501
R23 T36 T57 is_a N501,interaction
R24 T57 T58 has_status interaction,transient
R25 T26 T32 has_status binding,universally conserved
R26 T37 T57 to K353,interaction
R27 T38 T57 to Q325,interaction
R28 T39 T57 to 386-92,interaction
R29 T40 T39 of_a AAQPFLL,386-92
R3 T18 T20 is_a mutant strains,binding interactions
R30 T7 T43 of_a ACE2,N-terminal helices
R31 T23 T46 of_a CD26,291-5
R32 T44 T46 of_a SAMLI,291-5
R33 T61 T30 is_a SARS-type,binding interaction
R34 T7 T30 to ACE2,binding interaction
R35 T55 T60 is_a Tylonycteris bat coronavirus,binding interaction
R36 T46 T60 to 291-5,binding interaction
R37 T61 T42 cause_of SARS-type,zoonotic spillovers
R38 T8 T63 of_a ACE2,above-mentioned multiple regions
R39 T51 T62 is_a N501,interaction
R40 T63 T62 to above-mentioned multiple regions,interaction
R41 T63 T37 coreference above-mentioned multiple regions,K353
R42 T63 T38 coreference above-mentioned multiple regions,Q325
R43 T63 T39 coreference above-mentioned multiple regions,386-92
R44 T59 T55 coreference bat viral,Tylonycteris bat coronavirus
R45 T59 T64 is_a bat viral,interaction
R46 T48 T47 of_a SS,333-4
R47 T24 T47 of_a CD26,333-4
R48 T47 T64 to 333-4,interaction
R49 T50 T61 coreference viral,SARS-type
R5 T19 T13 of_a target proteins,human
R50 T52 T66 of_a N501Y lineage B.1.1.7,mutation
R51 T2 T66 of_a SARS-CoV-2,mutation
R52 T66 T54 of_a mutation,Y501
R53 T54 T31 is_a Y501,binding
R54 T53 T31 to K353,binding
R55 T3 T53 of_a ACE2,K353
R57 T31 T68 has_status binding,alone
R58 T67 T31 is_a more stable,binding
R6 T19 T20 to target proteins,binding interactions
R7 T20 T17 cause_of binding interactions,zoonotic spillovers
R8 T10 T9 abbreviation RBD,receptor binding domain
R9 T21 T9 of_a S spike glycoprotein,receptor binding domain