PubMed:9814708
Annnotations
bionlp-st-gro-2013-development
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 13-35 | Cell | denotes | pluripotent stem cells |
T2 | 43-52 | Eukaryote | denotes | mammalian |
T3 | 53-59 | LivingEntity | denotes | embryo |
T4 | 75-99 | TranscriptionFactor | denotes | POU transcription factor |
T5 | 100-104 | TranscriptionFactor | denotes | Oct4 |
T6 | 106-110 | TranscriptionFactor | denotes | Oct4 |
T7 | 116-125 | Eukaryote | denotes | mammalian |
T8 | 126-150 | TranscriptionFactor | denotes | POU transcription factor |
T12 | 187-197 | Cell | denotes | germ cells |
T13 | 230-234 | TranscriptionFactor | denotes | Oct4 |
T14 | 272-299 | Cell | denotes | pluripotential founder cell |
T15 | 318-327 | Eukaryote | denotes | mammalian |
T16 | 328-334 | LivingEntity | denotes | embryo |
T17 | 336-340 | TranscriptionFactor | denotes | Oct4 |
T18 | 351-358 | LivingEntity | denotes | embryos |
T19 | 416-421 | Cell | denotes | cells |
T24 | 746-772 | Protein | denotes | fibroblast growth factor-4 |
T25 | 785-789 | TranscriptionFactor | denotes | Oct4 |
T29 | 845-855 | Cell | denotes | stem cells |
T30 | 863-876 | Cell | denotes | trophectoderm |
T10 | 164-182 | Cell | denotes | early embryo cells |
T31 | 501-535 | Cell | denotes | extraembryonic trophoblast lineage |
T20 | 720-744 | GeneProduct | denotes | Oct4 target gene product |
T21 | 806-829 | Protein | denotes | paracrine growth factor |
E1 | 151-160 | GeneExpression | denotes | expressed |
E3 | 795-805 | RegulatoryProcess | denotes | determines |
E4 | 830-839 | SignalingPathway | denotes | signaling |
E5 | 475-490 | CellDifferentiation | denotes | differentiation |
R1 | T3 | T2 | fromSpecies | embryo,mammalian |
R2 | T3 | T1 | hasPart | embryo,pluripotent stem cells |
R3 | T8 | T7 | fromSpecies | POU transcription factor,mammalian |
R5 | E1 | T12 | locatedIn | expressed,germ cells |
R7 | T16 | T15 | fromSpecies | embryo,mammalian |
R4 | E1 | T10 | locatedIn | expressed,early embryo cells |
R6 | T14 | T16 | locatedIn | pluripotential founder cell,embryo |
R8 | T6 | E1 | hasPatient | Oct4,expressed |
R9 | T25 | E3 | hasAgent | Oct4,determines |
R10 | E4 | E3 | hasPatient | signaling,determines |
Anatomy-MAT
Id | Subject | Object | Predicate | Lexical cue | mat_id |
---|---|---|---|---|---|
T1 | 25-35 | Body_part | denotes | stem cells | http://purl.obolibrary.org/obo/MAT_0000185 |
T2 | 53-59 | Body_part | denotes | embryo | http://purl.obolibrary.org/obo/MAT_0000226 |
T3 | 170-176 | Body_part | denotes | embryo | http://purl.obolibrary.org/obo/MAT_0000226 |
T4 | 187-197 | Body_part | denotes | germ cells | http://purl.obolibrary.org/obo/MAT_0000334 |
T5 | 328-334 | Body_part | denotes | embryo | http://purl.obolibrary.org/obo/MAT_0000226 |
T6 | 351-358 | Body_part | denotes | embryos | http://purl.obolibrary.org/obo/MAT_0000226 |
T7 | 374-384 | Body_part | denotes | blastocyst | http://purl.obolibrary.org/obo/MAT_0000067|http://purl.obolibrary.org/obo/MAT_0000396 |
T9 | 400-415 | Body_part | denotes | inner cell mass | http://purl.obolibrary.org/obo/MAT_0000250 |
T10 | 575-590 | Body_part | denotes | inner cell mass | http://purl.obolibrary.org/obo/MAT_0000250 |
T11 | 647-654 | Body_part | denotes | embryos | http://purl.obolibrary.org/obo/MAT_0000226 |
T12 | 845-855 | Body_part | denotes | stem cells | http://purl.obolibrary.org/obo/MAT_0000185 |
Anatomy-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 13-35 | Body_part | denotes | pluripotent stem cells | http://purl.obolibrary.org/obo/CL_0002248 |
T2 | 53-59 | Body_part | denotes | embryo | http://purl.obolibrary.org/obo/UBERON_0000922 |
T3 | 164-176 | Body_part | denotes | early embryo | http://purl.obolibrary.org/obo/UBERON_0019248 |
T4 | 187-197 | Body_part | denotes | germ cells | http://purl.obolibrary.org/obo/CL_0000586 |
T5 | 328-334 | Body_part | denotes | embryo | http://purl.obolibrary.org/obo/UBERON_0000922 |
T6 | 374-384 | Body_part | denotes | blastocyst | http://purl.obolibrary.org/obo/UBERON_0000358|http://purl.obolibrary.org/obo/UBERON_0002532 |
T8 | 400-421 | Body_part | denotes | inner cell mass cells | http://purl.obolibrary.org/obo/CL_2000020 |
T9 | 516-527 | Body_part | denotes | trophoblast | http://purl.obolibrary.org/obo/UBERON_0000088 |
T10 | 575-590 | Body_part | denotes | inner cell mass | http://purl.obolibrary.org/obo/UBERON_0000087 |
T11 | 592-603 | Body_part | denotes | trophoblast | http://purl.obolibrary.org/obo/UBERON_0000088 |
T12 | 669-680 | Body_part | denotes | trophoblast | http://purl.obolibrary.org/obo/UBERON_0000088 |
T13 | 746-756 | Body_part | denotes | fibroblast | http://purl.obolibrary.org/obo/CL_0000057 |
T14 | 845-855 | Body_part | denotes | stem cells | http://purl.obolibrary.org/obo/CL_0000034 |
T15 | 863-876 | Body_part | denotes | trophectoderm | http://purl.obolibrary.org/obo/UBERON_0004345 |
Glycosmos15-CL
Id | Subject | Object | Predicate | Lexical cue | cl_id |
---|---|---|---|---|---|
T1 | 13-35 | Cell | denotes | pluripotent stem cells | http://purl.obolibrary.org/obo/CL:0002248 |
T2 | 187-197 | Cell | denotes | germ cells | http://purl.obolibrary.org/obo/CL:0000586 |
T3 | 400-421 | Cell | denotes | inner cell mass cells | http://purl.obolibrary.org/obo/CL:2000020 |
T4 | 746-756 | Cell | denotes | fibroblast | http://purl.obolibrary.org/obo/CL:0000057 |
T5 | 845-855 | Cell | denotes | stem cells | http://purl.obolibrary.org/obo/CL:0000034 |