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PubMed:9419430 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 24-53 protein denotes CD40-specific single-chain Fv
T2 75-91 protein denotes variable regions
T3 95-104 protein denotes mAb G28-5
T4 108-123 protein denotes single-chain Fv
T5 125-128 protein denotes sFv
T6 153-169 protein denotes variable regions
T7 191-200 protein denotes mAb G28-5
T8 221-225 protein denotes CD40
T9 301-310 protein denotes G28-5 sFv
T10 324-336 protein denotes CD40 agonist
T11 362-366 protein denotes CD40
T12 409-416 protein denotes CD40-Ig
T13 430-439 protein denotes G28-5 sFv
T14 471-480 protein denotes G28-5 IgG
T15 507-511 protein denotes CD40
T16 525-532 cell_type denotes B cells
T17 548-557 protein denotes G28-5 IgG
T18 585-594 protein denotes G28-5 sFv
T19 605-609 protein denotes CD40
T20 644-658 protein denotes natural ligand
T21 660-683 protein denotes gp39-CD8 fusion protein
T22 764-776 protein denotes binding site
T23 780-785 protein denotes G28-5

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 221-225 NP denotes CD40
C2 277-285 NP denotes solution
C3 301-310 NP denotes G28-5 sFv
C4 315-336 NP denotes a potent CD40 agonist
C5 337-341 NP denotes that
C6 362-366 NP denotes CD40
C7 370-386 NP denotes the cell surface
C8 420-428 NP denotes solution
C9 430-439 NP denotes G28-5 sFv
C10 471-480 NP denotes G28-5 IgG
C11 507-521 NP denotes CD40 responses
C12 548-557 NP denotes G28-5 IgG
C13 585-594 NP denotes G28-5 sFv
C14 605-619 NP denotes CD40 responses
C15 868-876 NP denotes solution
C16 884-901 NP denotes the cell surfaces
R1 C5 C4 coref-relat that,a potent CD40 agonist
R2 C6 C1 coref-ident CD40,CD40
R3 C8 C2 coref-ident solution,solution
R4 C9 C3 coref-ident G28-5 sFv,G28-5 sFv
R5 C12 C10 coref-ident G28-5 IgG,G28-5 IgG
R6 C13 C9 coref-ident G28-5 sFv,G28-5 sFv
R7 C14 C11 coref-ident CD40 responses,CD40 responses
R8 C15 C8 coref-ident solution,solution
R9 C16 C7 coref-ident the cell surfaces,the cell surface

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-105 Sentence denotes Agonistic activity of a CD40-specific single-chain Fv constructed from the variable regions of mAb G28-5.
S2 106-201 Sentence denotes A single-chain Fv (sFv) was expressed from the variable regions of the CD40-specific mAb G28-5.
S3 202-286 Sentence denotes The molecule bound CD40 with a high affinity (2.2 nM) and was a monomer in solution.
S4 287-429 Sentence denotes Surprisingly, G28-5 sFv was a potent CD40 agonist that rapidly crosslinked CD40 on the cell surface but did not crosslink CD40-Ig in solution.
S5 430-547 Sentence denotes G28-5 sFv was a more potent agonist than G28-5 IgG and was able to stimulate CD40 responses by B cells and monocytes.
S6 548-685 Sentence denotes G28-5 IgG partially blocked, whereas G28-5 sFv augmented CD40 responses during stimulation with natural ligand (gp39-CD8 fusion protein).
S7 686-902 Sentence denotes These results indicate that the functional activity of ligands built from the binding site of G28-5 is highly dependent upon the size and physical properties of the molecule both in solution and on the cell surfaces.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-18 other_name denotes Agonistic activity
T2 24-53 protein_molecule denotes CD40-specific single-chain Fv
T3 75-91 protein_domain_or_region denotes variable regions
T4 95-104 protein_molecule denotes mAb G28-5
T5 108-123 protein_molecule denotes single-chain Fv
T6 125-128 protein_molecule denotes sFv
T7 153-169 protein_domain_or_region denotes variable regions
T8 191-200 protein_molecule denotes mAb G28-5
T9 221-225 protein_molecule denotes CD40
T10 301-310 protein_molecule denotes G28-5 sFv
T11 324-328 protein_molecule denotes CD40
T12 362-366 protein_molecule denotes CD40
T13 374-386 cell_component denotes cell surface
T14 409-413 protein_molecule denotes CD40
T15 430-439 protein_molecule denotes G28-5 sFv
T16 471-480 protein_molecule denotes G28-5 IgG
T17 507-511 protein_molecule denotes CD40
T18 525-532 cell_type denotes B cells
T19 548-557 protein_molecule denotes G28-5 IgG
T20 585-594 protein_molecule denotes G28-5 sFv
T21 605-609 protein_molecule denotes CD40
T22 644-658 protein_family_or_group denotes natural ligand
T23 660-683 protein_molecule denotes gp39-CD8 fusion protein
T24 718-737 other_name denotes functional activity
T25 764-776 protein_domain_or_region denotes binding site
T26 780-785 protein_molecule denotes G28-5
T27 888-901 cell_component denotes cell surfaces