PubMed:9405439
Annnotations
ggdb-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 114-144 | https://acgg.asia/db/ggdb/info/gg025 | denotes | chondroitin 6-sulfotransferase |
| T2 | 146-150 | https://acgg.asia/db/ggdb/info/gg028 | denotes | C6ST |
| T3 | 146-150 | https://acgg.asia/db/ggdb/info/gg027 | denotes | C6ST |
| T4 | 146-150 | https://acgg.asia/db/ggdb/info/gg025 | denotes | C6ST |
| T5 | 189-193 | https://acgg.asia/db/ggdb/info/gg028 | denotes | C6ST |
| T6 | 189-193 | https://acgg.asia/db/ggdb/info/gg027 | denotes | C6ST |
| T7 | 189-193 | https://acgg.asia/db/ggdb/info/gg025 | denotes | C6ST |
| T8 | 544-548 | https://acgg.asia/db/ggdb/info/gg028 | denotes | C6ST |
| T9 | 544-548 | https://acgg.asia/db/ggdb/info/gg027 | denotes | C6ST |
| T10 | 544-548 | https://acgg.asia/db/ggdb/info/gg025 | denotes | C6ST |
| T11 | 861-865 | https://acgg.asia/db/ggdb/info/gg028 | denotes | C6ST |
| T12 | 861-865 | https://acgg.asia/db/ggdb/info/gg027 | denotes | C6ST |
| T13 | 861-865 | https://acgg.asia/db/ggdb/info/gg025 | denotes | C6ST |
| T14 | 1295-1303 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
| T15 | 1356-1364 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
| T16 | 1506-1514 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
| T17 | 1635-1643 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
| T18 | 1760-1768 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 48-63 | Glycan_Motif | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82109MW |
| T2 | 114-125 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T3 | 217-228 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T4 | 230-245 | Glycan_Motif | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82109MW |
| T5 | 258-277 | Glycan_Motif | denotes | N-acetyllactosamine | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00055MO |
| T6 | 410-425 | Glycan_Motif | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82109MW |
| T7 | 796-811 | Glycan_Motif | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82109MW |
| T8 | 995-1010 | Glycan_Motif | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82109MW |
| T9 | 1132-1147 | Glycan_Motif | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82109MW |
| T10 | 1255-1270 | Glycan_Motif | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82109MW |
| T11 | 1808-1823 | Glycan_Motif | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82109MW |
GGDB-2020
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 114-144 | https://acgg.asia/db/ggdb/info/gg025 | denotes | chondroitin 6-sulfotransferase |
| T2 | 114-144 | https://acgg.asia/db/ggdb/info/gg026 | denotes | chondroitin 6-sulfotransferase |
| T3 | 114-144 | https://acgg.asia/db/ggdb/info/gg027 | denotes | chondroitin 6-sulfotransferase |
| T4 | 114-144 | https://acgg.asia/db/ggdb/info/gg028 | denotes | chondroitin 6-sulfotransferase |
| T5 | 146-150 | https://acgg.asia/db/ggdb/info/gg025 | denotes | C6ST |
| T6 | 146-150 | https://acgg.asia/db/ggdb/info/gg027 | denotes | C6ST |
| T7 | 146-150 | https://acgg.asia/db/ggdb/info/gg028 | denotes | C6ST |
| T8 | 189-193 | https://acgg.asia/db/ggdb/info/gg025 | denotes | C6ST |
| T9 | 189-193 | https://acgg.asia/db/ggdb/info/gg027 | denotes | C6ST |
| T10 | 189-193 | https://acgg.asia/db/ggdb/info/gg028 | denotes | C6ST |
| T11 | 544-548 | https://acgg.asia/db/ggdb/info/gg025 | denotes | C6ST |
| T12 | 544-548 | https://acgg.asia/db/ggdb/info/gg027 | denotes | C6ST |
| T13 | 544-548 | https://acgg.asia/db/ggdb/info/gg028 | denotes | C6ST |
| T14 | 861-865 | https://acgg.asia/db/ggdb/info/gg025 | denotes | C6ST |
| T15 | 861-865 | https://acgg.asia/db/ggdb/info/gg027 | denotes | C6ST |
| T16 | 861-865 | https://acgg.asia/db/ggdb/info/gg028 | denotes | C6ST |
| T17 | 1295-1303 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
| T18 | 1356-1364 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
| T19 | 1506-1514 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
| T20 | 1635-1643 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
| T21 | 1760-1768 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 48-63 | http://www.glycoepitope.jp/epitopes/EP0085 | denotes | keratan sulfate |
| T2 | 114-125 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T3 | 217-228 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T4 | 230-245 | http://www.glycoepitope.jp/epitopes/EP0085 | denotes | keratan sulfate |
| T5 | 410-425 | http://www.glycoepitope.jp/epitopes/EP0085 | denotes | keratan sulfate |
| T6 | 796-811 | http://www.glycoepitope.jp/epitopes/EP0085 | denotes | keratan sulfate |
| T7 | 995-1010 | http://www.glycoepitope.jp/epitopes/EP0085 | denotes | keratan sulfate |
| T8 | 1132-1147 | http://www.glycoepitope.jp/epitopes/EP0085 | denotes | keratan sulfate |
| T9 | 1255-1270 | http://www.glycoepitope.jp/epitopes/EP0085 | denotes | keratan sulfate |
| T10 | 1808-1823 | http://www.glycoepitope.jp/epitopes/EP0085 | denotes | keratan sulfate |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-87 | Sentence | denotes | Molecular cloning and characterization of human keratan sulfate Gal-6-sulfotransferase. |
| T2 | 88-188 | Sentence | denotes | We have previously cloned chondroitin 6-sulfotransferase (C6ST) cDNA from chick embryo chondrocytes. |
| T3 | 189-295 | Sentence | denotes | C6ST catalyzes sulfation of chondroitin, keratan sulfate, and sialyl N-acetyllactosamine oligosaccharides. |
| T4 | 296-426 | Sentence | denotes | In this study, we report the cloning and characterization of a novel sulfotransferase that catalyzes sulfation of keratan sulfate. |
| T5 | 427-554 | Sentence | denotes | This new sulfotransferase cDNA clone was obtained from a human fetal brain library by cross-hybridization with chick C6ST cDNA. |
| T6 | 555-698 | Sentence | denotes | The cDNA clone obtained contains a single open reading frame that predicts a type II transmembrane protein composed of 411 amino acid residues. |
| T7 | 699-918 | Sentence | denotes | When the cDNA was introduced into a eukaryotic expression vector and transfected in COS-7 cells, keratan sulfate sulfotransferase activity was overexpressed, but C6ST activity was not increased over that of the control. |
| T8 | 919-1191 | Sentence | denotes | Structural analysis of 35S-labeled glycosaminoglycan, which was formed from keratan sulfate by the reaction with 35S-labeled 3'-phosphoadenosine 5'-phosphosulfate and the recombinant sulfotransferase, showed that keratan sulfate was sulfated at position 6 of Gal residues. |
| T9 | 1192-1355 | Sentence | denotes | On the basis of the acceptor substrate specificity, we propose keratan sulfate Gal-6-sulfotransferase (KSGal6ST) for the name of the newly cloned sulfotransferase. |
| T10 | 1356-1398 | Sentence | denotes | KSGal6ST was assigned to chromosome 11p11. |
| T11 | 1399-1444 | Sentence | denotes | 1-11.2 by fluorescence in situ hybridization. |
| T12 | 1445-1549 | Sentence | denotes | Among various human adult tissues, a 2.8-kilobase message of KSGal6ST was expressed mainly in the brain. |
| T13 | 1550-1727 | Sentence | denotes | When poly(A)+ RNAs from the chick embryo cornea and brain were probed with the human KSGal6ST cDNA in Northern hybridization, a clear band with about 2.8 kilobases was detected. |
| T14 | 1728-1848 | Sentence | denotes | These observations suggest that KSGal6ST may participate in the biosynthesis of keratan sulfate in the brain and cornea. |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 168-174 | http://purl.obolibrary.org/obo/MAT_0000226 | denotes | embryo |
| T2 | 496-501 | http://purl.obolibrary.org/obo/MAT_0000098 | denotes | brain |
| T3 | 1543-1548 | http://purl.obolibrary.org/obo/MAT_0000098 | denotes | brain |
| T4 | 1584-1590 | http://purl.obolibrary.org/obo/MAT_0000226 | denotes | embryo |
| T5 | 1602-1607 | http://purl.obolibrary.org/obo/MAT_0000098 | denotes | brain |
| T6 | 1831-1836 | http://purl.obolibrary.org/obo/MAT_0000098 | denotes | brain |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 48-63 | https://glytoucan.org/Structures/Glycans/G82109MW | denotes | keratan sulfate |
| T2 | 114-125 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T3 | 217-228 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T4 | 230-245 | https://glytoucan.org/Structures/Glycans/G82109MW | denotes | keratan sulfate |
| T5 | 258-277 | https://glytoucan.org/Structures/Glycans/G00055MO | denotes | N-acetyllactosamine |
| T6 | 410-425 | https://glytoucan.org/Structures/Glycans/G82109MW | denotes | keratan sulfate |
| T7 | 796-811 | https://glytoucan.org/Structures/Glycans/G82109MW | denotes | keratan sulfate |
| T8 | 995-1010 | https://glytoucan.org/Structures/Glycans/G82109MW | denotes | keratan sulfate |
| T9 | 1132-1147 | https://glytoucan.org/Structures/Glycans/G82109MW | denotes | keratan sulfate |
| T10 | 1255-1270 | https://glytoucan.org/Structures/Glycans/G82109MW | denotes | keratan sulfate |
| T11 | 1808-1823 | https://glytoucan.org/Structures/Glycans/G82109MW | denotes | keratan sulfate |
glycogenes
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoGenes20190927-B_T1 | 114-144 | https://acgg.asia/db/ggdb/info/gg025 | denotes | chondroitin 6-sulfotransferase |
| PD-GlycoGenes20190927-B_T2 | 146-150 | https://acgg.asia/db/ggdb/info/gg028 | denotes | C6ST |
| PD-GlycoGenes20190927-B_T3 | 146-150 | https://acgg.asia/db/ggdb/info/gg027 | denotes | C6ST |
| PD-GlycoGenes20190927-B_T4 | 146-150 | https://acgg.asia/db/ggdb/info/gg025 | denotes | C6ST |
| PD-GlycoGenes20190927-B_T5 | 189-193 | https://acgg.asia/db/ggdb/info/gg028 | denotes | C6ST |
| PD-GlycoGenes20190927-B_T6 | 189-193 | https://acgg.asia/db/ggdb/info/gg027 | denotes | C6ST |
| PD-GlycoGenes20190927-B_T7 | 189-193 | https://acgg.asia/db/ggdb/info/gg025 | denotes | C6ST |
| PD-GlycoGenes20190927-B_T8 | 544-548 | https://acgg.asia/db/ggdb/info/gg028 | denotes | C6ST |
| PD-GlycoGenes20190927-B_T9 | 544-548 | https://acgg.asia/db/ggdb/info/gg027 | denotes | C6ST |
| PD-GlycoGenes20190927-B_T10 | 544-548 | https://acgg.asia/db/ggdb/info/gg025 | denotes | C6ST |
| PD-GlycoGenes20190927-B_T11 | 637-639 | https://acgg.asia/db/ggdb/info/gg111 | denotes | II |
| PD-GlycoGenes20190927-B_T12 | 861-865 | https://acgg.asia/db/ggdb/info/gg028 | denotes | C6ST |
| PD-GlycoGenes20190927-B_T13 | 861-865 | https://acgg.asia/db/ggdb/info/gg027 | denotes | C6ST |
| PD-GlycoGenes20190927-B_T14 | 861-865 | https://acgg.asia/db/ggdb/info/gg025 | denotes | C6ST |
| PD-GlycoGenes20190927-B_T15 | 1295-1303 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
| PD-GlycoGenes20190927-B_T16 | 1356-1364 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
| PD-GlycoGenes20190927-B_T17 | 1506-1514 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
| PD-GlycoGenes20190927-B_T18 | 1635-1643 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
| PD-GlycoGenes20190927-B_T19 | 1760-1768 | https://acgg.asia/db/ggdb/info/gg027 | denotes | KSGal6ST |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 168-174 | Body_part | denotes | embryo | http://purl.obolibrary.org/obo/MAT_0000226 |
| T2 | 496-501 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
| T3 | 1543-1548 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
| T4 | 1584-1590 | Body_part | denotes | embryo | http://purl.obolibrary.org/obo/MAT_0000226 |
| T5 | 1602-1607 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
| T6 | 1831-1836 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 1313-1317 | Glycan | denotes | name |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 42-47 | OrganismTaxon | denotes | human | 9606 |
| T2 | 484-489 | OrganismTaxon | denotes | human | 9606 |
| T3 | 1459-1464 | OrganismTaxon | denotes | human | 9606 |
| T4 | 1629-1634 | OrganismTaxon | denotes | human | 9606 |
Glycosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 48-63 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
| T2 | 114-125 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T3 | 217-228 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T4 | 230-245 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
| T5 | 410-425 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
| T6 | 796-811 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
| T7 | 995-1010 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
| T8 | 1132-1147 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
| T9 | 1255-1270 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
| T10 | 1808-1823 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 168-174 | Body_part | denotes | embryo | http://purl.obolibrary.org/obo/UBERON_0000922 |
| T2 | 175-187 | Body_part | denotes | chondrocytes | http://purl.obolibrary.org/obo/CL_0000138 |
| T3 | 496-501 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
| T5 | 640-653 | Body_part | denotes | transmembrane | http://purl.obolibrary.org/obo/GO_0016020 |
| T6 | 1381-1391 | Body_part | denotes | chromosome | http://purl.obolibrary.org/obo/GO_0005694 |
| T7 | 1543-1548 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
| T9 | 1584-1590 | Body_part | denotes | embryo | http://purl.obolibrary.org/obo/UBERON_0000922 |
| T10 | 1591-1597 | Body_part | denotes | cornea | http://purl.obolibrary.org/obo/UBERON_0000964 |
| T11 | 1602-1607 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
| T13 | 1831-1836 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
| T15 | 1841-1847 | Body_part | denotes | cornea | http://purl.obolibrary.org/obo/UBERON_0000964 |
Glycosmos15-CL
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 175-187 | Cell | denotes | chondrocytes | http://purl.obolibrary.org/obo/CL:0000138 |
| T2 | 1555-1559 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T4 | 1684-1688 | Cell | denotes | band | http://purl.obolibrary.org/obo/CL:0000560 |