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PubMed:9311921 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 0-5 protein denotes NF-AT
T2 30-34 protein denotes CAML
T3 61-103 protein denotes tumor necrosis factor receptor superfamily
T4 123-158 protein denotes nuclear factor of activated T cells
T5 159-179 protein denotes transcription factor
T6 181-186 protein denotes NF-AT
T7 237-292 protein denotes CAML (calcium-modulator and cyclophilin ligand) protein
T8 311-316 protein denotes NF-AT
T9 350-364 cell_line denotes Jurkat T cells
T10 382-424 protein denotes tumor necrosis factor receptor superfamily
T11 468-472 protein denotes CAML
T12 496-523 protein denotes lymphocyte-specific protein
T13 536-540 protein denotes TACI
T14 542-585 protein denotes transmembrane activator and CAML-interactor
T15 606-630 cell_line denotes transfected Jurkat cells
T16 636-660 protein denotes TACI-specific antibodies
T17 686-707 protein denotes transcription factors
T18 708-713 protein denotes NF-AT
T19 715-719 protein denotes AP-1
T20 725-733 protein denotes NFkappaB
T21 735-739 protein denotes TACI
T22 762-767 protein denotes NF-AT
T23 798-827 protein denotes dominant-negative CAML mutant
T24 846-850 protein denotes CAML

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-104 Sentence denotes NF-AT activation induced by a CAML-interacting member of the tumor necrosis factor receptor superfamily.
S2 105-232 Sentence denotes Activation of the nuclear factor of activated T cells transcription factor (NF-AT) is a key event underlying lymphocyte action.
S3 233-365 Sentence denotes The CAML (calcium-modulator and cyclophilin ligand) protein is a coinducer of NF-AT activation when overexpressed in Jurkat T cells.
S4 366-473 Sentence denotes A member of the tumor necrosis factor receptor superfamily was isolated by virtue of its affinity for CAML.
S5 474-734 Sentence denotes Cross-linking of this lymphocyte-specific protein, designated TACI (transmembrane activator and CAML-interactor), on the surface of transfected Jurkat cells with TACI-specific antibodies led to activation of the transcription factors NF-AT, AP-1, and NFkappaB.
S6 735-879 Sentence denotes TACI-induced activation of NF-AT was specifically blocked by a dominant-negative CAML mutant, thus implicating CAML as a signaling intermediate.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C2 28-103 NP denotes a CAML-interacting member of the tumor necrosis factor receptor superfamily
C1 0-103 NP denotes NF-AT activation induced by a CAML-interacting member of the tumor necrosis factor receptor superfamily
C4 119-187 NP denotes the nuclear factor of activated T cells transcription factor (NF-AT)
C3 105-187 NP denotes Activation of the nuclear factor of activated T cells transcription factor (NF-AT)
C5 233-292 NP denotes The CAML (calcium-modulator and cyclophilin ligand) protein
C6 311-327 NP denotes NF-AT activation
C7 366-424 NP denotes A member of the tumor necrosis factor receptor superfamily
C8 451-454 NP denotes its
C9 468-472 NP denotes CAML
C10 491-523 NP denotes this lymphocyte-specific protein
C11 536-586 NP denotes TACI (transmembrane activator and CAML-interactor)
C13 762-767 NP denotes NF-AT
C12 735-767 NP denotes TACI-induced activation of NF-AT
C14 846-850 NP denotes CAML
R1 C6 C3 coref-ident NF-AT activation,Activation of the nuclear factor of activated T cells transcription factor (NF-AT)
R2 C7 C2 coref-ident A member of the tumor necrosis factor receptor superfamily,a CAML-interacting member of the tumor necrosis factor receptor superfamily
R3 C8 C7 coref-pron its,A member of the tumor necrosis factor receptor superfamily
R4 C9 C5 coref-ident CAML,The CAML (calcium-modulator and cyclophilin ligand) protein
R5 C10 C7 coref-ident this lymphocyte-specific protein,A member of the tumor necrosis factor receptor superfamily
R6 C11 C10 coref-ident TACI (transmembrane activator and CAML-interactor),this lymphocyte-specific protein
R7 C13 C4 coref-ident NF-AT,the nuclear factor of activated T cells transcription factor (NF-AT)
R8 C12 C1 coref-ident TACI-induced activation of NF-AT,NF-AT activation induced by a CAML-interacting member of the tumor necrosis factor receptor superfamily
R9 C14 C9 coref-ident CAML,CAML

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-5 protein_molecule denotes NF-AT
T2 30-34 protein_molecule denotes CAML
T3 61-103 protein_family_or_group denotes tumor necrosis factor receptor superfamily
T4 123-158 protein_molecule denotes nuclear factor of activated T cells
T5 159-179 protein_family_or_group denotes transcription factor
T6 181-186 protein_molecule denotes NF-AT
T7 214-231 other_name denotes lymphocyte action
T8 237-292 protein_molecule denotes CAML (calcium-modulator and cyclophilin ligand) protein
T9 311-316 protein_molecule denotes NF-AT
T10 350-364 cell_line denotes Jurkat T cells
T11 382-424 protein_family_or_group denotes tumor necrosis factor receptor superfamily
T12 468-472 protein_molecule denotes CAML
T13 496-523 protein_family_or_group denotes lymphocyte-specific protein
T14 536-540 protein_molecule denotes TACI
T15 542-569 protein_molecule denotes transmembrane activator and
T16 570-574 protein_molecule denotes CAML
T17 606-630 cell_line denotes transfected Jurkat cells
T18 636-640 protein_molecule denotes TACI
T19 686-707 protein_family_or_group denotes transcription factors
T20 708-713 protein_molecule denotes NF-AT
T21 715-719 protein_molecule denotes AP-1
T22 725-733 protein_complex denotes NFkappaB
T23 735-739 protein_molecule denotes TACI
T24 762-767 protein_molecule denotes NF-AT
T25 798-815 protein_molecule denotes dominant-negative
T26 816-820 protein_molecule denotes CAML
T27 846-850 protein_molecule denotes CAML
T28 856-878 other_name denotes signaling intermediate

bionlp-st-gro-2013-development

Id Subject Object Predicate Lexical cue
T1 0-5 TranscriptionFactor denotes NF-AT
T13 181-186 TranscriptionFactor denotes NF-AT
T14 214-224 Cell denotes lymphocyte
T15 237-241 Protein denotes CAML
T16 243-283 Protein denotes calcium-modulator and cyclophilin ligand
T18 311-316 Protein denotes NF-AT
T21 350-364 Cell denotes Jurkat T cells
T24 468-472 Protein denotes CAML
T27 536-540 Protein denotes TACI
T28 542-585 Protein denotes transmembrane activator and CAML-interactor
T29 595-602 CellComponent denotes surface
T30 618-630 Cell denotes Jurkat cells
T31 636-640 Protein denotes TACI
T32 650-660 Protein denotes antibodies
T34 686-707 TranscriptionFactor denotes transcription factors
T35 708-713 TranscriptionFactor denotes NF-AT
T36 715-719 TranscriptionFactor denotes AP-1
T37 725-733 TranscriptionFactor denotes NFkappaB
T38 735-739 Protein denotes TACI
T40 762-767 Protein denotes NF-AT
T44 846-850 Protein denotes CAML
T4 61-91 Protein denotes tumor necrosis factor receptor
T5 30-53 Protein denotes CAML-interacting member
T6 123-179 TranscriptionFactor denotes nuclear factor of activated T cells transcription factor
T7 382-412 Protein denotes tumor necrosis factor receptor
T9 496-523 Protein denotes lymphocyte-specific protein
T10 816-827 MutantProtein denotes CAML mutant
E1 6-16 PositiveRegulation denotes activation
E2 17-24 Increase denotes induced
E4 105-115 PositiveRegulation denotes Activation
E6 317-327 PositiveRegulation denotes activation
E7 333-346 PositiveRegulationOfGeneExpression denotes overexpressed
E8 668-678 PositiveRegulation denotes activation
E9 748-758 PositiveRegulation denotes activation
E10 785-792 NegativeRegulation denotes blocked
E11 856-865 SignalingPathway denotes signaling
E3 668-678 PositiveRegulation denotes activation
E5 668-678 PositiveRegulation denotes activation
R1 E4 T14 locatedIn Activation,lymphocyte
R2 E7 T21 locatedIn overexpressed,Jurkat T cells
R3 T29 T30 locatedIn surface,Jurkat cells
R5 T1 E1 hasPatient NF-AT,activation
R6 T5 E2 hasAgent CAML-interacting member,induced
R7 E1 E2 hasPatient activation,induced
R8 T13 E4 hasPatient NF-AT,Activation
R9 T15 E6 hasAgent CAML,activation
R10 T18 E6 hasPatient NF-AT,activation
R11 T15 E7 hasPatient CAML,overexpressed
R12 T35 E8 hasPatient NF-AT,activation
R13 T38 E9 hasAgent TACI,activation
R14 T40 E9 hasPatient NF-AT,activation
R15 T10 E10 hasAgent CAML mutant,blocked
R16 E9 E10 hasPatient activation,blocked
R17 T36 E3 hasPatient AP-1,activation
R18 T37 E5 hasPatient NFkappaB,activation