PubMed:9160887
Annnotations
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 20-50 | cell_type | denotes | peripheral blood T-lymphocytes |
| T2 | 67-85 | protein | denotes | HTLV-I Tax mutants |
| T3 | 130-134 | protein | denotes | Tax1 |
| T4 | 138-169 | protein | denotes | transcriptional trans-activator |
| T5 | 317-347 | protein | denotes | cellular transcription factors |
| T6 | 349-357 | protein | denotes | CREB/ATF |
| T7 | 359-368 | protein | denotes | NF-kappaB |
| T8 | 374-377 | protein | denotes | SRF |
| T9 | 384-388 | protein | denotes | Tax1 |
| T10 | 411-425 | DNA | denotes | cellular genes |
| T11 | 529-533 | protein | denotes | Tax1 |
| T12 | 608-620 | protein | denotes | Tax1 mutants |
| T13 | 669-697 | cell_type | denotes | peripheral blood lymphocytes |
| T14 | 699-702 | cell_type | denotes | PBL |
| T15 | 745-749 | cell_type | denotes | PBLs |
| T16 | 782-791 | protein | denotes | NF-kappaB |
| T17 | 848-852 | protein | denotes | IL-2 |
| T18 | 891-903 | cell_type | denotes | CD4+ T-cells |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 67-128 | NP | denotes | HTLV-I Tax mutants with different trans-activating phenotypes |
| C2 | 130-134 | NP | denotes | Tax1 |
| C4 | 173-220 | NP | denotes | the Human T-cell leukemia virus type I (HTLV-I) |
| C3 | 136-220 | NP | denotes | a transcriptional trans-activator of the Human T-cell leukemia virus type I (HTLV-I) |
| C5 | 302-347 | NP | denotes | three distinct cellular transcription factors |
| C6 | 349-377 | NP | denotes | CREB/ATF, NF-kappaB, and SRF |
| C7 | 466-487 | NP | denotes | T-cell transformation |
| C8 | 491-497 | NP | denotes | HTLV-I |
| C9 | 571-592 | NP | denotes | T-cell transformation |
| C10 | 608-663 | NP | denotes | Tax1 mutants with different trans-activating phenotypes |
| C11 | 669-703 | NP | denotes | peripheral blood lymphocytes (PBL) |
| C12 | 739-749 | NP | denotes | these PBLs |
| C13 | 867-903 | NP | denotes | the clonal expansion of CD4+ T-cells |
| C14 | 905-910 | NP | denotes | which |
| R1 | C3 | C2 | coref-appos | a transcriptional trans-activator of the Human T-cell leukemia virus type I (HTLV-I),Tax1 |
| R2 | C6 | C5 | coref-appos | "CREB/ATF, NF-kappaB, and SRF",three distinct cellular transcription factors |
| R3 | C8 | C4 | coref-ident | HTLV-I,the Human T-cell leukemia virus type I (HTLV-I) |
| R4 | C9 | C7 | coref-ident | T-cell transformation,T-cell transformation |
| R5 | C10 | C1 | coref-ident | Tax1 mutants with different trans-activating phenotypes,HTLV-I Tax mutants with different trans-activating phenotypes |
| R6 | C12 | C11 | coref-ident | these PBLs,peripheral blood lymphocytes (PBL) |
| R7 | C14 | C13 | coref-relat | which,the clonal expansion of CD4+ T-cells |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-129 | Sentence | denotes | Characterization of peripheral blood T-lymphocytes transduced with HTLV-I Tax mutants with different trans-activating phenotypes. |
| S2 | 130-378 | Sentence | denotes | Tax1, a transcriptional trans-activator of the Human T-cell leukemia virus type I (HTLV-I), induces the expression of many cellular genes through interaction with at least three distinct cellular transcription factors; CREB/ATF, NF-kappaB, and SRF. |
| S3 | 379-498 | Sentence | denotes | This Tax1-induced activation of cellular genes is considered to be a critical event in T-cell transformation by HTLV-I. |
| S4 | 499-726 | Sentence | denotes | To elucidate the role of each Tax1-inducible transcriptional pathway in T-cell transformation, we introduced Tax1 mutants with different trans-activating phenotypes into peripheral blood lymphocytes (PBL) by retroviral vectors. |
| S5 | 727-853 | Sentence | denotes | Analysis of these PBLs revealed that activation of the NF-kappaB pathway is sufficient to promote the growth response to IL-2. |
| S6 | 854-1020 | Sentence | denotes | However, for the clonal expansion of CD4+ T-cells, which is a characteristic result of HTLV-I infection, activation of the CREB/ATF and SRF pathways is also required. |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 20-50 | cell_type | denotes | peripheral blood T-lymphocytes |
| T2 | 67-73 | virus | denotes | HTLV-I |
| T3 | 101-128 | other_name | denotes | trans-activating phenotypes |
| T4 | 130-134 | protein_molecule | denotes | Tax1 |
| T5 | 138-169 | protein_family_or_group | denotes | transcriptional trans-activator |
| T6 | 177-211 | virus | denotes | Human T-cell leukemia virus type I |
| T7 | 213-219 | virus | denotes | HTLV-I |
| T8 | 317-325 | protein_family_or_group | denotes | cellular |
| T9 | 326-347 | protein_family_or_group | denotes | transcription factors |
| T10 | 349-357 | protein_molecule | denotes | CREB/ATF |
| T11 | 359-368 | protein_complex | denotes | NF-kappaB |
| T12 | 374-377 | protein_molecule | denotes | SRF |
| T13 | 384-388 | protein_molecule | denotes | Tax1 |
| T14 | 411-425 | DNA_family_or_group | denotes | cellular genes |
| T15 | 466-487 | other_name | denotes | T-cell transformation |
| T16 | 491-497 | virus | denotes | HTLV-I |
| T17 | 529-533 | protein_molecule | denotes | Tax1 |
| T18 | 571-592 | other_name | denotes | T-cell transformation |
| T19 | 608-612 | protein_molecule | denotes | Tax1 |
| T20 | 636-663 | other_name | denotes | trans-activating phenotypes |
| T21 | 669-685 | cell_type | denotes | peripheral blood |
| T22 | 686-697 | cell_type | denotes | lymphocytes |
| T23 | 699-702 | cell_type | denotes | PBL |
| T24 | 745-749 | cell_type | denotes | PBLs |
| T25 | 782-791 | protein_complex | denotes | NF-kappaB |
| T26 | 848-852 | protein_molecule | denotes | IL-2 |
| T27 | 891-903 | cell_type | denotes | CD4+ T-cells |
| T28 | 941-947 | virus | denotes | HTLV-I |