PubMed:9092562 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/9092562","sourcedb":"PubMed","sourceid":"9092562","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/9092562","text":"The Pax-5 gene is alternatively spliced during B-cell development.\nThe transcription factor Pax-5 is expressed during the early stages of B-cell differentiation and influences the expression of several B-cell-specific genes. In addition to the existing isoform (Pax-5, which we have named Pax-5a), we have isolated three new isoforms, Pax-5b, Pax-5d, and Pax-5e, from murine spleen and B-lymphoid cell lines using library screenings and polymerase chain reaction amplification. Isoforms Pax-5b and Pax-5e have spliced out their second exon, resulting in proteins with only a partial DNA-binding domain. Isoforms Pax-5d and Pax-5e have deleted the 3'-region, which encodes the transactivating domain, and replaced it with a novel sequence. The existence of alternative Pax-5 transcripts was confirmed using RNase protection assays. Furthermore, Pax-5a and Pax-5b proteins were detected using Western blot analysis. Pax-5a was detectable in pro-, pre-, and mature B-cell lines, but not in two plasmacytomas; Pax-5b was shown to be present at low levels in mature B-cell lines and, unexpectedly, in one plasma cell line, but not in pro-B-cell or T-cell lines. Mobility shift assays showed that in vitro translated Pax-5a and Pax-5d, but not Pax-5b or Pax-5e, could interact with a B-cell-specific activator protein-binding site on the blk promoter. Using this assay, we also showed that Pax-5d was present in nuclear extracts of some (but not all) B-lymphoid lines and interacts with the B-cell-specific activator protein-binding site. The pattern of differential expression of alternatively spliced Pax-5 isoforms suggests that they may be important regulators of transcription during B-cell maturation.","tracks":[{"project":"genia-medco-coref","denotations":[{"id":"C1","span":{"begin":240,"end":296},"obj":"NP"},{"id":"C2","span":{"begin":315,"end":333},"obj":"NP"},{"id":"C3","span":{"begin":335,"end":361},"obj":"NP"},{"id":"C4","span":{"begin":478,"end":504},"obj":"NP"},{"id":"C5","span":{"begin":522,"end":527},"obj":"NP"},{"id":"C6","span":{"begin":643,"end":656},"obj":"NP"},{"id":"C7","span":{"begin":658,"end":663},"obj":"NP"},{"id":"C8","span":{"begin":713,"end":715},"obj":"NP"},{"id":"C9","span":{"begin":914,"end":920},"obj":"NP"},{"id":"C10","span":{"begin":1006,"end":1012},"obj":"NP"},{"id":"C11","span":{"begin":1238,"end":1244},"obj":"NP"},{"id":"C12","span":{"begin":1276,"end":1344},"obj":"NP"},{"id":"C13","span":{"begin":1481,"end":1531},"obj":"NP"},{"id":"C14","span":{"begin":1575,"end":1611},"obj":"NP"},{"id":"C15","span":{"begin":1626,"end":1630},"obj":"NP"}],"relations":[{"id":"R1","pred":"coref-appos","subj":"C3","obj":"C2"},{"id":"R2","pred":"coref-pron","subj":"C5","obj":"C4"},{"id":"R3","pred":"coref-relat","subj":"C7","obj":"C6"},{"id":"R4","pred":"coref-pron","subj":"C8","obj":"C6"},{"id":"R5","pred":"coref-ident","subj":"C9","obj":"C1"},{"id":"R6","pred":"coref-ident","subj":"C11","obj":"C10"},{"id":"R7","pred":"coref-ident","subj":"C13","obj":"C12"},{"id":"R8","pred":"coref-pron","subj":"C15","obj":"C14"}],"attributes":[{"subj":"C1","pred":"source","obj":"genia-medco-coref"},{"subj":"C2","pred":"source","obj":"genia-medco-coref"},{"subj":"C3","pred":"source","obj":"genia-medco-coref"},{"subj":"C4","pred":"source","obj":"genia-medco-coref"},{"subj":"C5","pred":"source","obj":"genia-medco-coref"},{"subj":"C6","pred":"source","obj":"genia-medco-coref"},{"subj":"C7","pred":"source","obj":"genia-medco-coref"},{"subj":"C8","pred":"source","obj":"genia-medco-coref"},{"subj":"C9","pred":"source","obj":"genia-medco-coref"},{"subj":"C10","pred":"source","obj":"genia-medco-coref"},{"subj":"C11","pred":"source","obj":"genia-medco-coref"},{"subj":"C12","pred":"source","obj":"genia-medco-coref"},{"subj":"C13","pred":"source","obj":"genia-medco-coref"},{"subj":"C14","pred":"source","obj":"genia-medco-coref"},{"subj":"C15","pred":"source","obj":"genia-medco-coref"}]},{"project":"jnlpba-st-training","denotations":[{"id":"T1","span":{"begin":4,"end":14},"obj":"DNA"},{"id":"T2","span":{"begin":71,"end":97},"obj":"protein"},{"id":"T3","span":{"begin":202,"end":223},"obj":"DNA"},{"id":"T4","span":{"begin":262,"end":267},"obj":"protein"},{"id":"T5","span":{"begin":289,"end":295},"obj":"protein"},{"id":"T6","span":{"begin":335,"end":341},"obj":"protein"},{"id":"T7","span":{"begin":343,"end":349},"obj":"protein"},{"id":"T8","span":{"begin":355,"end":361},"obj":"protein"},{"id":"T9","span":{"begin":386,"end":407},"obj":"cell_line"},{"id":"T10","span":{"begin":487,"end":493},"obj":"protein"},{"id":"T11","span":{"begin":498,"end":504},"obj":"protein"},{"id":"T12","span":{"begin":583,"end":601},"obj":"protein"},{"id":"T13","span":{"begin":623,"end":629},"obj":"protein"},{"id":"T14","span":{"begin":647,"end":656},"obj":"protein"},{"id":"T15","span":{"begin":768,"end":785},"obj":"RNA"},{"id":"T16","span":{"begin":806,"end":811},"obj":"protein"},{"id":"T17","span":{"begin":844,"end":850},"obj":"protein"},{"id":"T18","span":{"begin":855,"end":870},"obj":"protein"},{"id":"T19","span":{"begin":914,"end":920},"obj":"protein"},{"id":"T20","span":{"begin":939,"end":974},"obj":"cell_line"},{"id":"T21","span":{"begin":1006,"end":1012},"obj":"protein"},{"id":"T22","span":{"begin":1054,"end":1073},"obj":"cell_line"},{"id":"T23","span":{"begin":1129,"end":1155},"obj":"cell_line"},{"id":"T24","span":{"begin":1211,"end":1217},"obj":"protein"},{"id":"T25","span":{"begin":1222,"end":1228},"obj":"protein"},{"id":"T26","span":{"begin":1238,"end":1244},"obj":"protein"},{"id":"T27","span":{"begin":1248,"end":1254},"obj":"protein"},{"id":"T28","span":{"begin":1278,"end":1324},"obj":"DNA"},{"id":"T29","span":{"begin":1332,"end":1344},"obj":"DNA"},{"id":"T30","span":{"begin":1384,"end":1390},"obj":"protein"},{"id":"T31","span":{"begin":1445,"end":1461},"obj":"cell_line"},{"id":"T32","span":{"begin":1485,"end":1531},"obj":"DNA"},{"id":"T33","span":{"begin":1575,"end":1611},"obj":"protein"},{"id":"T34","span":{"begin":1648,"end":1675},"obj":"protein"}],"attributes":[{"subj":"T1","pred":"source","obj":"jnlpba-st-training"},{"subj":"T2","pred":"source","obj":"jnlpba-st-training"},{"subj":"T3","pred":"source","obj":"jnlpba-st-training"},{"subj":"T4","pred":"source","obj":"jnlpba-st-training"},{"subj":"T5","pred":"source","obj":"jnlpba-st-training"},{"subj":"T6","pred":"source","obj":"jnlpba-st-training"},{"subj":"T7","pred":"source","obj":"jnlpba-st-training"},{"subj":"T8","pred":"source","obj":"jnlpba-st-training"},{"subj":"T9","pred":"source","obj":"jnlpba-st-training"},{"subj":"T10","pred":"source","obj":"jnlpba-st-training"},{"subj":"T11","pred":"source","obj":"jnlpba-st-training"},{"subj":"T12","pred":"source","obj":"jnlpba-st-training"},{"subj":"T13","pred":"source","obj":"jnlpba-st-training"},{"subj":"T14","pred":"source","obj":"jnlpba-st-training"},{"subj":"T15","pred":"source","obj":"jnlpba-st-training"},{"subj":"T16","pred":"source","obj":"jnlpba-st-training"},{"subj":"T17","pred":"source","obj":"jnlpba-st-training"},{"subj":"T18","pred":"source","obj":"jnlpba-st-training"},{"subj":"T19","pred":"source","obj":"jnlpba-st-training"},{"subj":"T20","pred":"source","obj":"jnlpba-st-training"},{"subj":"T21","pred":"source","obj":"jnlpba-st-training"},{"subj":"T22","pred":"source","obj":"jnlpba-st-training"},{"subj":"T23","pred":"source","obj":"jnlpba-st-training"},{"subj":"T24","pred":"source","obj":"jnlpba-st-training"},{"subj":"T25","pred":"source","obj":"jnlpba-st-training"},{"subj":"T26","pred":"source","obj":"jnlpba-st-training"},{"subj":"T27","pred":"source","obj":"jnlpba-st-training"},{"subj":"T28","pred":"source","obj":"jnlpba-st-training"},{"subj":"T29","pred":"source","obj":"jnlpba-st-training"},{"subj":"T30","pred":"source","obj":"jnlpba-st-training"},{"subj":"T31","pred":"source","obj":"jnlpba-st-training"},{"subj":"T32","pred":"source","obj":"jnlpba-st-training"},{"subj":"T33","pred":"source","obj":"jnlpba-st-training"},{"subj":"T34","pred":"source","obj":"jnlpba-st-training"}]},{"project":"sentences","denotations":[{"id":"T1","span":{"begin":0,"end":66},"obj":"Sentence"},{"id":"T2","span":{"begin":67,"end":224},"obj":"Sentence"},{"id":"T3","span":{"begin":225,"end":477},"obj":"Sentence"},{"id":"T4","span":{"begin":478,"end":602},"obj":"Sentence"},{"id":"T5","span":{"begin":603,"end":738},"obj":"Sentence"},{"id":"T6","span":{"begin":739,"end":830},"obj":"Sentence"},{"id":"T7","span":{"begin":831,"end":913},"obj":"Sentence"},{"id":"T8","span":{"begin":914,"end":1156},"obj":"Sentence"},{"id":"T9","span":{"begin":1157,"end":1345},"obj":"Sentence"},{"id":"T10","span":{"begin":1346,"end":1532},"obj":"Sentence"},{"id":"T11","span":{"begin":1533,"end":1701},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":66},"obj":"Sentence"},{"id":"T2","span":{"begin":67,"end":224},"obj":"Sentence"},{"id":"T3","span":{"begin":225,"end":477},"obj":"Sentence"},{"id":"T4","span":{"begin":478,"end":602},"obj":"Sentence"},{"id":"T5","span":{"begin":603,"end":738},"obj":"Sentence"},{"id":"T6","span":{"begin":739,"end":830},"obj":"Sentence"},{"id":"T7","span":{"begin":831,"end":913},"obj":"Sentence"},{"id":"T8","span":{"begin":914,"end":1156},"obj":"Sentence"},{"id":"T9","span":{"begin":1157,"end":1345},"obj":"Sentence"},{"id":"T10","span":{"begin":1346,"end":1532},"obj":"Sentence"},{"id":"T11","span":{"begin":1533,"end":1701},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T10","pred":"source","obj":"sentences"},{"subj":"T11","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T10","pred":"source","obj":"sentences"},{"subj":"T11","pred":"source","obj":"sentences"}]},{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":4,"end":7},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":92,"end":95},"obj":"OrganismTaxon"},{"id":"T3","span":{"begin":262,"end":265},"obj":"OrganismTaxon"},{"id":"T4","span":{"begin":289,"end":292},"obj":"OrganismTaxon"},{"id":"T5","span":{"begin":335,"end":338},"obj":"OrganismTaxon"},{"id":"T6","span":{"begin":343,"end":346},"obj":"OrganismTaxon"},{"id":"T7","span":{"begin":355,"end":358},"obj":"OrganismTaxon"},{"id":"T8","span":{"begin":487,"end":490},"obj":"OrganismTaxon"},{"id":"T9","span":{"begin":498,"end":501},"obj":"OrganismTaxon"},{"id":"T10","span":{"begin":612,"end":615},"obj":"OrganismTaxon"},{"id":"T11","span":{"begin":623,"end":626},"obj":"OrganismTaxon"},{"id":"T12","span":{"begin":768,"end":771},"obj":"OrganismTaxon"},{"id":"T13","span":{"begin":844,"end":847},"obj":"OrganismTaxon"},{"id":"T14","span":{"begin":855,"end":858},"obj":"OrganismTaxon"},{"id":"T15","span":{"begin":914,"end":917},"obj":"OrganismTaxon"},{"id":"T16","span":{"begin":1006,"end":1009},"obj":"OrganismTaxon"},{"id":"T17","span":{"begin":1211,"end":1214},"obj":"OrganismTaxon"},{"id":"T18","span":{"begin":1222,"end":1225},"obj":"OrganismTaxon"},{"id":"T19","span":{"begin":1238,"end":1241},"obj":"OrganismTaxon"},{"id":"T20","span":{"begin":1248,"end":1251},"obj":"OrganismTaxon"},{"id":"T21","span":{"begin":1384,"end":1387},"obj":"OrganismTaxon"},{"id":"T22","span":{"begin":1597,"end":1600},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"2033138"},{"id":"A2","pred":"db_id","subj":"T2","obj":"2033138"},{"id":"A3","pred":"db_id","subj":"T3","obj":"2033138"},{"id":"A4","pred":"db_id","subj":"T4","obj":"2033138"},{"id":"A5","pred":"db_id","subj":"T5","obj":"2033138"},{"id":"A6","pred":"db_id","subj":"T6","obj":"2033138"},{"id":"A7","pred":"db_id","subj":"T7","obj":"2033138"},{"id":"A8","pred":"db_id","subj":"T8","obj":"2033138"},{"id":"A9","pred":"db_id","subj":"T9","obj":"2033138"},{"id":"A10","pred":"db_id","subj":"T10","obj":"2033138"},{"id":"A11","pred":"db_id","subj":"T11","obj":"2033138"},{"id":"A12","pred":"db_id","subj":"T12","obj":"2033138"},{"id":"A13","pred":"db_id","subj":"T13","obj":"2033138"},{"id":"A14","pred":"db_id","subj":"T14","obj":"2033138"},{"id":"A15","pred":"db_id","subj":"T15","obj":"2033138"},{"id":"A16","pred":"db_id","subj":"T16","obj":"2033138"},{"id":"A17","pred":"db_id","subj":"T17","obj":"2033138"},{"id":"A18","pred":"db_id","subj":"T18","obj":"2033138"},{"id":"A19","pred":"db_id","subj":"T19","obj":"2033138"},{"id":"A20","pred":"db_id","subj":"T20","obj":"2033138"},{"id":"A21","pred":"db_id","subj":"T21","obj":"2033138"},{"id":"A22","pred":"db_id","subj":"T22","obj":"2033138"},{"subj":"T1","pred":"source","obj":"NCBITAXON"},{"subj":"T2","pred":"source","obj":"NCBITAXON"},{"subj":"T3","pred":"source","obj":"NCBITAXON"},{"subj":"T4","pred":"source","obj":"NCBITAXON"},{"subj":"T5","pred":"source","obj":"NCBITAXON"},{"subj":"T6","pred":"source","obj":"NCBITAXON"},{"subj":"T7","pred":"source","obj":"NCBITAXON"},{"subj":"T8","pred":"source","obj":"NCBITAXON"},{"subj":"T9","pred":"source","obj":"NCBITAXON"},{"subj":"T10","pred":"source","obj":"NCBITAXON"},{"subj":"T11","pred":"source","obj":"NCBITAXON"},{"subj":"T12","pred":"source","obj":"NCBITAXON"},{"subj":"T13","pred":"source","obj":"NCBITAXON"},{"subj":"T14","pred":"source","obj":"NCBITAXON"},{"subj":"T15","pred":"source","obj":"NCBITAXON"},{"subj":"T16","pred":"source","obj":"NCBITAXON"},{"subj":"T17","pred":"source","obj":"NCBITAXON"},{"subj":"T18","pred":"source","obj":"NCBITAXON"},{"subj":"T19","pred":"source","obj":"NCBITAXON"},{"subj":"T20","pred":"source","obj":"NCBITAXON"},{"subj":"T21","pred":"source","obj":"NCBITAXON"},{"subj":"T22","pred":"source","obj":"NCBITAXON"}]},{"project":"pubmed-sentences-benchmark","denotations":[{"id":"S1","span":{"begin":0,"end":66},"obj":"Sentence"},{"id":"S2","span":{"begin":67,"end":224},"obj":"Sentence"},{"id":"S3","span":{"begin":225,"end":477},"obj":"Sentence"},{"id":"S4","span":{"begin":478,"end":602},"obj":"Sentence"},{"id":"S5","span":{"begin":603,"end":738},"obj":"Sentence"},{"id":"S6","span":{"begin":739,"end":830},"obj":"Sentence"},{"id":"S7","span":{"begin":831,"end":913},"obj":"Sentence"},{"id":"S8","span":{"begin":914,"end":1156},"obj":"Sentence"},{"id":"S9","span":{"begin":1157,"end":1345},"obj":"Sentence"},{"id":"S10","span":{"begin":1346,"end":1532},"obj":"Sentence"},{"id":"S11","span":{"begin":1533,"end":1701},"obj":"Sentence"}],"attributes":[{"subj":"S1","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S2","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S3","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S4","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S5","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S6","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S7","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S8","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S9","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S10","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S11","pred":"source","obj":"pubmed-sentences-benchmark"}]},{"project":"GENIAcorpus","denotations":[{"id":"T1","span":{"begin":4,"end":14},"obj":"DNA_domain_or_region"},{"id":"T2","span":{"begin":47,"end":65},"obj":"other_name"},{"id":"T3","span":{"begin":71,"end":91},"obj":"protein_family_or_group"},{"id":"T4","span":{"begin":138,"end":160},"obj":"other_name"},{"id":"T5","span":{"begin":202,"end":223},"obj":"DNA_family_or_group"},{"id":"T6","span":{"begin":262,"end":267},"obj":"protein_molecule"},{"id":"T7","span":{"begin":289,"end":295},"obj":"protein_molecule"},{"id":"T8","span":{"begin":335,"end":341},"obj":"protein_molecule"},{"id":"T9","span":{"begin":343,"end":349},"obj":"protein_molecule"},{"id":"T10","span":{"begin":355,"end":361},"obj":"protein_molecule"},{"id":"T11","span":{"begin":386,"end":407},"obj":"cell_line"},{"id":"T12","span":{"begin":414,"end":432},"obj":"other_name"},{"id":"T13","span":{"begin":437,"end":476},"obj":"other_name"},{"id":"T14","span":{"begin":487,"end":493},"obj":"protein_molecule"},{"id":"T15","span":{"begin":498,"end":504},"obj":"protein_molecule"},{"id":"T16","span":{"begin":583,"end":601},"obj":"protein_domain_or_region"},{"id":"T17","span":{"begin":623,"end":629},"obj":"protein_molecule"},{"id":"T18","span":{"begin":647,"end":656},"obj":"protein_domain_or_region"},{"id":"T19","span":{"begin":768,"end":773},"obj":"protein_molecule"},{"id":"T20","span":{"begin":806,"end":811},"obj":"protein_molecule"},{"id":"T21","span":{"begin":844,"end":850},"obj":"protein_molecule"},{"id":"T22","span":{"begin":855,"end":861},"obj":"protein_molecule"},{"id":"T23","span":{"begin":891,"end":912},"obj":"other_name"},{"id":"T24","span":{"begin":914,"end":920},"obj":"protein_molecule"},{"id":"T25","span":{"begin":991,"end":1004},"obj":"tissue"},{"id":"T26","span":{"begin":1006,"end":1012},"obj":"protein_molecule"},{"id":"T27","span":{"begin":1054,"end":1073},"obj":"cell_line"},{"id":"T28","span":{"begin":1157,"end":1178},"obj":"other_name"},{"id":"T29","span":{"begin":1211,"end":1217},"obj":"protein_molecule"},{"id":"T30","span":{"begin":1222,"end":1228},"obj":"protein_molecule"},{"id":"T31","span":{"begin":1238,"end":1244},"obj":"protein_molecule"},{"id":"T32","span":{"begin":1248,"end":1254},"obj":"protein_molecule"},{"id":"T33","span":{"begin":1278,"end":1324},"obj":"DNA_domain_or_region"},{"id":"T34","span":{"begin":1332,"end":1344},"obj":"DNA_domain_or_region"},{"id":"T35","span":{"begin":1384,"end":1390},"obj":"protein_molecule"},{"id":"T36","span":{"begin":1406,"end":1422},"obj":"cell_component"},{"id":"T37","span":{"begin":1445,"end":1461},"obj":"cell_line"},{"id":"T38","span":{"begin":1485,"end":1531},"obj":"DNA_domain_or_region"},{"id":"T39","span":{"begin":1575,"end":1611},"obj":"protein_family_or_group"},{"id":"T40","span":{"begin":1648,"end":1675},"obj":"protein_family_or_group"},{"id":"T41","span":{"begin":1683,"end":1700},"obj":"other_name"}],"attributes":[{"subj":"T1","pred":"source","obj":"GENIAcorpus"},{"subj":"T2","pred":"source","obj":"GENIAcorpus"},{"subj":"T3","pred":"source","obj":"GENIAcorpus"},{"subj":"T4","pred":"source","obj":"GENIAcorpus"},{"subj":"T5","pred":"source","obj":"GENIAcorpus"},{"subj":"T6","pred":"source","obj":"GENIAcorpus"},{"subj":"T7","pred":"source","obj":"GENIAcorpus"},{"subj":"T8","pred":"source","obj":"GENIAcorpus"},{"subj":"T9","pred":"source","obj":"GENIAcorpus"},{"subj":"T10","pred":"source","obj":"GENIAcorpus"},{"subj":"T11","pred":"source","obj":"GENIAcorpus"},{"subj":"T12","pred":"source","obj":"GENIAcorpus"},{"subj":"T13","pred":"source","obj":"GENIAcorpus"},{"subj":"T14","pred":"source","obj":"GENIAcorpus"},{"subj":"T15","pred":"source","obj":"GENIAcorpus"},{"subj":"T16","pred":"source","obj":"GENIAcorpus"},{"subj":"T17","pred":"source","obj":"GENIAcorpus"},{"subj":"T18","pred":"source","obj":"GENIAcorpus"},{"subj":"T19","pred":"source","obj":"GENIAcorpus"},{"subj":"T20","pred":"source","obj":"GENIAcorpus"},{"subj":"T21","pred":"source","obj":"GENIAcorpus"},{"subj":"T22","pred":"source","obj":"GENIAcorpus"},{"subj":"T23","pred":"source","obj":"GENIAcorpus"},{"subj":"T24","pred":"source","obj":"GENIAcorpus"},{"subj":"T25","pred":"source","obj":"GENIAcorpus"},{"subj":"T26","pred":"source","obj":"GENIAcorpus"},{"subj":"T27","pred":"source","obj":"GENIAcorpus"},{"subj":"T28","pred":"source","obj":"GENIAcorpus"},{"subj":"T29","pred":"source","obj":"GENIAcorpus"},{"subj":"T30","pred":"source","obj":"GENIAcorpus"},{"subj":"T31","pred":"source","obj":"GENIAcorpus"},{"subj":"T32","pred":"source","obj":"GENIAcorpus"},{"subj":"T33","pred":"source","obj":"GENIAcorpus"},{"subj":"T34","pred":"source","obj":"GENIAcorpus"},{"subj":"T35","pred":"source","obj":"GENIAcorpus"},{"subj":"T36","pred":"source","obj":"GENIAcorpus"},{"subj":"T37","pred":"source","obj":"GENIAcorpus"},{"subj":"T38","pred":"source","obj":"GENIAcorpus"},{"subj":"T39","pred":"source","obj":"GENIAcorpus"},{"subj":"T40","pred":"source","obj":"GENIAcorpus"},{"subj":"T41","pred":"source","obj":"GENIAcorpus"}]},{"project":"mondo_disease","denotations":[{"id":"T1","span":{"begin":991,"end":1004},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0005615"},{"subj":"T1","pred":"source","obj":"mondo_disease"}]},{"project":"Glycosmos6-MAT","denotations":[{"id":"T1","span":{"begin":375,"end":381},"obj":"http://purl.obolibrary.org/obo/MAT_0000085"}],"attributes":[{"subj":"T1","pred":"source","obj":"Glycosmos6-MAT"}]},{"project":"Anatomy-MAT","denotations":[{"id":"T1","span":{"begin":375,"end":381},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"mat_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MAT_0000085"},{"subj":"T1","pred":"source","obj":"Anatomy-MAT"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":47,"end":53},"obj":"Body_part"},{"id":"T2","span":{"begin":138,"end":144},"obj":"Body_part"},{"id":"T3","span":{"begin":202,"end":208},"obj":"Body_part"},{"id":"T4","span":{"begin":375,"end":381},"obj":"Body_part"},{"id":"T5","span":{"begin":955,"end":968},"obj":"Body_part"},{"id":"T6","span":{"begin":1054,"end":1067},"obj":"Body_part"},{"id":"T7","span":{"begin":1100,"end":1111},"obj":"Body_part"},{"id":"T8","span":{"begin":1129,"end":1139},"obj":"Body_part"},{"id":"T9","span":{"begin":1143,"end":1149},"obj":"Body_part"},{"id":"T10","span":{"begin":1278,"end":1284},"obj":"Body_part"},{"id":"T11","span":{"begin":1485,"end":1491},"obj":"Body_part"},{"id":"T12","span":{"begin":1683,"end":1689},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CL_0000236"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CL_0000236"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CL_0000236"},{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/UBERON_0002106"},{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CL_0000785"},{"id":"A6","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/CL_0000785"},{"id":"A7","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/CL_0000786"},{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CL_0000826"},{"id":"A9","pred":"uberon_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/CL_0000084"},{"id":"A10","pred":"uberon_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/CL_0000236"},{"id":"A11","pred":"uberon_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/CL_0000236"},{"id":"A12","pred":"uberon_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/CL_0000236"},{"subj":"T1","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T2","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T3","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T4","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T5","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T6","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T7","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T8","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T9","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T10","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T11","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T12","pred":"source","obj":"Anatomy-UBERON"}]},{"project":"HP-phenotype","denotations":[{"id":"T1","span":{"begin":991,"end":1004},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"HP:0011857"},{"subj":"T1","pred":"source","obj":"HP-phenotype"}],"namespaces":[{"prefix":"HP","uri":"http://purl.obolibrary.org/obo/HP_"}]},{"project":"CL-cell","denotations":[{"id":"T1","span":{"begin":47,"end":53},"obj":"Cell"},{"id":"T2","span":{"begin":138,"end":144},"obj":"Cell"},{"id":"T3","span":{"begin":202,"end":208},"obj":"Cell"},{"id":"T4","span":{"begin":955,"end":968},"obj":"Cell"},{"id":"T5","span":{"begin":962,"end":968},"obj":"Cell"},{"id":"T6","span":{"begin":1054,"end":1067},"obj":"Cell"},{"id":"T7","span":{"begin":1061,"end":1067},"obj":"Cell"},{"id":"T8","span":{"begin":1100,"end":1111},"obj":"Cell"},{"id":"T9","span":{"begin":1129,"end":1139},"obj":"Cell"},{"id":"T10","span":{"begin":1133,"end":1139},"obj":"Cell"},{"id":"T11","span":{"begin":1143,"end":1149},"obj":"Cell"},{"id":"T12","span":{"begin":1276,"end":1284},"obj":"Cell"},{"id":"T13","span":{"begin":1278,"end":1284},"obj":"Cell"},{"id":"T14","span":{"begin":1485,"end":1491},"obj":"Cell"},{"id":"T15","span":{"begin":1683,"end":1689},"obj":"Cell"}],"attributes":[{"id":"A1","pred":"cl_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CL:0000236"},{"id":"A2","pred":"cl_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CL:0000236"},{"id":"A3","pred":"cl_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CL:0000236"},{"id":"A4","pred":"cl_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CL:0000785"},{"id":"A5","pred":"cl_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CL:0000236"},{"id":"A6","pred":"cl_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/CL:0000785"},{"id":"A7","pred":"cl_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/CL:0000236"},{"id":"A8","pred":"cl_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CL:0000786"},{"id":"A9","pred":"cl_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/CL:0000826"},{"id":"A10","pred":"cl_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/CL:0000236"},{"id":"A11","pred":"cl_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/CL:0000084"},{"id":"A12","pred":"cl_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/CL:4023097"},{"id":"A13","pred":"cl_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/CL:0000236"},{"id":"A14","pred":"cl_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/CL:0000236"},{"id":"A15","pred":"cl_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/CL:0000236"},{"subj":"T1","pred":"source","obj":"CL-cell"},{"subj":"T2","pred":"source","obj":"CL-cell"},{"subj":"T3","pred":"source","obj":"CL-cell"},{"subj":"T4","pred":"source","obj":"CL-cell"},{"subj":"T5","pred":"source","obj":"CL-cell"},{"subj":"T6","pred":"source","obj":"CL-cell"},{"subj":"T7","pred":"source","obj":"CL-cell"},{"subj":"T8","pred":"source","obj":"CL-cell"},{"subj":"T9","pred":"source","obj":"CL-cell"},{"subj":"T10","pred":"source","obj":"CL-cell"},{"subj":"T11","pred":"source","obj":"CL-cell"},{"subj":"T12","pred":"source","obj":"CL-cell"},{"subj":"T13","pred":"source","obj":"CL-cell"},{"subj":"T14","pred":"source","obj":"CL-cell"},{"subj":"T15","pred":"source","obj":"CL-cell"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"genia-medco-coref","color":"#93eccb","default":true},{"id":"jnlpba-st-training","color":"#ecb193"},{"id":"sentences","color":"#9793ec"},{"id":"NCBITAXON","color":"#a8ec93"},{"id":"pubmed-sentences-benchmark","color":"#ec93c2"},{"id":"GENIAcorpus","color":"#93dcec"},{"id":"mondo_disease","color":"#ece193"},{"id":"Glycosmos6-MAT","color":"#c793ec"},{"id":"Anatomy-MAT","color":"#93ecad"},{"id":"Anatomy-UBERON","color":"#ec9393"},{"id":"HP-phenotype","color":"#93acec"},{"id":"CL-cell","color":"#c6ec93"}]}]}}