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PubMed:8809111 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 24-88 DNA denotes human myeloid cell nuclear differentiation antigen gene promoter
T2 90-94 protein denotes MNDA
T3 96-140 protein denotes myeloid cell nuclear differentiation antigen
T4 148-190 protein denotes interferon alpha regulated nuclear protein
T5 222-250 cell_type denotes human myelomonocytic lineage
T6 354-374 DNA denotes 5' flanking sequence
T7 415-454 DNA denotes interferon-stimulated response elements
T8 456-460 DNA denotes ISRE
T9 523-527 protein denotes MNDA
T10 533-568 DNA denotes TATA-less interferon-regulated gene
T11 576-588 DNA denotes DNA elements
T12 618-627 DNA denotes Myb sites
T13 637-640 DNA denotes Ets
T14 645-666 DNA denotes Ets related PU.1 site
T15 674-682 DNA denotes Sp1 site
T16 712-737 DNA denotes transcription start sites
T17 828-832 protein denotes MNDA
T18 849-869 DNA denotes 5' flanking sequence
T19 913-929 protein denotes interferon alpha
T20 958-962 protein denotes MNDA
T21 1018-1052 DNA denotes myelomonocytic cell specific genes
T22 1079-1095 protein denotes interferon alpha

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 90-141 NP denotes MNDA (myeloid cell nuclear differentiation antigen)
C3 291-348 NP denotes this lineage-specific and interferon-regulated expression
C5 378-386 NP denotes the gene
C6 350-386 NP denotes the 5' flanking sequence of the gene
C2 523-527 NP denotes MNDA
C4 828-843 NP denotes MNDA expression
C7 845-869 NP denotes The 5' flanking sequence
C8 874-891 NP denotes promoter activity
C9 892-897 NP denotes which
C11 913-929 NP denotes interferon alpha
C10 958-973 NP denotes MNDA expression
C12 1079-1095 NP denotes interferon alpha
R1 C5 C1 coref-ident the gene,MNDA (myeloid cell nuclear differentiation antigen)
R2 C2 C1 coref-ident MNDA,MNDA (myeloid cell nuclear differentiation antigen)
R3 C4 C3 coref-ident MNDA expression,this lineage-specific and interferon-regulated expression
R4 C7 C6 coref-ident The 5' flanking sequence,the 5' flanking sequence of the gene
R5 C9 C8 coref-relat which,promoter activity
R6 C10 C4 coref-ident MNDA expression,MNDA expression
R7 C12 C11 coref-ident interferon alpha,interferon alpha

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-89 Sentence denotes Characterization of the human myeloid cell nuclear differentiation antigen gene promoter.
S2 90-251 Sentence denotes MNDA (myeloid cell nuclear differentiation antigen) is an interferon alpha regulated nuclear protein expressed only in cells of the human myelomonocytic lineage.
S3 252-410 Sentence denotes To identify mechanisms responsible for this lineage-specific and interferon-regulated expression, the 5' flanking sequence of the gene has been characterized.
S4 411-569 Sentence denotes Two interferon-stimulated response elements (ISRE) flank a multiple transcription start site region identifying MNDA as a TATA-less interferon-regulated gene.
S5 570-738 Sentence denotes Other DNA elements present include a cluster of Myb sites, several Ets, an Ets related PU.1 site and an Sp1 site located within 600 bp of the transcription start sites.
S6 739-844 Sentence denotes In addition, DNA methylation was revealed as one of the possible factors in establishing MNDA expression.
S7 845-930 Sentence denotes The 5' flanking sequence has promoter activity which is elevated by interferon alpha.
S8 931-1096 Sentence denotes The findings indicate that MNDA expression is regulated by mechanisms similar to other myelomonocytic cell specific genes and genes up-regulated by interferon alpha.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 24-66 other_name denotes human myeloid cell nuclear differentiation
T2 90-94 protein_molecule denotes MNDA
T3 96-140 protein_molecule denotes myeloid cell nuclear differentiation antigen
T4 148-190 protein_family_or_group denotes interferon alpha regulated nuclear protein
T5 222-250 cell_type denotes human myelomonocytic lineage
T6 354-374 DNA_domain_or_region denotes 5' flanking sequence
T7 415-454 DNA_domain_or_region denotes interferon-stimulated response elements
T8 456-460 DNA_domain_or_region denotes ISRE
T9 523-527 protein_molecule denotes MNDA
T10 533-568 DNA_domain_or_region denotes TATA-less interferon-regulated gene
T11 576-588 DNA_family_or_group denotes DNA elements
T12 618-627 DNA_domain_or_region denotes Myb sites
T13 637-640 DNA_domain_or_region denotes Ets
T14 645-666 DNA_domain_or_region denotes Ets related PU.1 site
T15 674-682 DNA_domain_or_region denotes Sp1 site
T16 698-704 polynucleotide denotes 600 bp
T17 712-737 DNA_domain_or_region denotes transcription start sites
T18 752-767 other_name denotes DNA methylation
T19 828-832 protein_molecule denotes MNDA
T20 849-869 DNA_domain_or_region denotes 5' flanking sequence
T21 874-891 other_name denotes promoter activity
T22 913-929 protein_molecule denotes interferon alpha
T23 958-962 protein_molecule denotes MNDA
T24 1018-1052 DNA_family_or_group denotes myelomonocytic cell specific genes
T25 1079-1095 protein_molecule denotes interferon alpha

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 24-29 OrganismTaxon denotes human 9606
T2 222-227 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 30-42 Body_part denotes myeloid cell http://purl.obolibrary.org/obo/CL_0000763
T2 96-108 Body_part denotes myeloid cell http://purl.obolibrary.org/obo/CL_0000763
T3 462-467 Body_part denotes flank http://purl.obolibrary.org/obo/UBERON_0000180

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 30-42 Cell denotes myeloid cell http://purl.obolibrary.org/obo/CL:0000763
T2 96-108 Cell denotes myeloid cell http://purl.obolibrary.org/obo/CL:0000763