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PubMed:8691123 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 0-20 protein denotes Activation protein 1
T2 61-79 DNA denotes interleukin 2 gene
T3 83-116 protein denotes Ca2+/calmodulin kinase type IV/Gr
T4 122-180 protein denotes Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr
T5 209-222 cell_type denotes T lymphocytes
T6 264-287 protein denotes T cell antigen receptor
T7 289-292 protein denotes TCR
T8 387-390 protein denotes TCR
T9 421-430 protein denotes CaMKIV/Gr
T10 443-484 protein denotes transcription factor activation protein 1
T11 486-490 protein denotes AP-1
T12 517-532 protein denotes T cell mitogens
T13 546-564 protein denotes p21ras oncoprotein
T14 566-576 protein denotes CaMKIV/ Gr
T15 636-641 DNA denotes c-fos
T16 664-670 DNA denotes p21ras
T17 674-685 protein denotes calcineurin
T18 687-691 protein denotes AP-1
T19 724-790 protein denotes nuclear factor of activated T cells (NFAT) transcriptional complex
T20 814-832 DNA denotes interleukin 2 gene
T21 847-854 cell_type denotes T cells
T22 876-885 protein denotes CaMKIV/Gr
T23 943-947 protein denotes NFAT
T24 977-987 DNA denotes NFAT sites
T25 995-1002 cell_type denotes T cells
T26 1044-1053 protein denotes CaMKIV/Gr
T27 1111-1124 cell_type denotes T lymphocytes

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 83-116 NP denotes Ca2+/calmodulin kinase type IV/Gr
C2 118-180 NP denotes The Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr
C3 209-222 NP denotes T lymphocytes
C4 311-313 NP denotes it
C5 331-374 NP denotes the Ca(2+)-dependent transcriptional events
C6 375-379 NP denotes that
C7 421-430 NP denotes CaMKIV/Gr
C8 439-491 NP denotes the transcription factor activation protein 1 (AP-1)
C9 542-564 NP denotes the p21ras oncoprotein
C10 664-670 NP denotes p21ras
C11 687-691 NP denotes AP-1
C12 720-790 NP denotes the nuclear factor of activated T cells (NFAT) transcriptional complex
C13 792-797 NP denotes which
C14 876-885 NP denotes CaMKIV/Gr
C15 1044-1053 NP denotes CaMKIV/Gr
C16 1111-1124 NP denotes T lymphocytes
R1 C2 C1 coref-ident The Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr,Ca2+/calmodulin kinase type IV/Gr
R2 C4 C2 coref-pron it,The Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr
R3 C6 C5 coref-relat that,the Ca(2+)-dependent transcriptional events
R4 C7 C2 coref-ident CaMKIV/Gr,The Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr
R5 C10 C9 coref-ident p21ras,the p21ras oncoprotein
R6 C11 C8 coref-ident AP-1,the transcription factor activation protein 1 (AP-1)
R7 C13 C12 coref-relat which,the nuclear factor of activated T cells (NFAT) transcriptional complex
R8 C14 C7 coref-ident CaMKIV/Gr,CaMKIV/Gr
R9 C15 C14 coref-ident CaMKIV/Gr,CaMKIV/Gr
R10 C16 C3 coref-ident T lymphocytes,T lymphocytes

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-117 Sentence denotes Activation protein 1-dependent transcriptional activation of interleukin 2 gene by Ca2+/calmodulin kinase type IV/Gr.
S2 118-402 Sentence denotes The Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr is selectively expressed in T lymphocytes and is activated after signaling via the T cell antigen receptor (TCR), indicating that it mediates some of the Ca(2+)-dependent transcriptional events that follow TCR engagement.
S3 403-565 Sentence denotes Here we show that CaMKIV/Gr induces the transcription factor activation protein 1 (AP-1) alone or in synergy with T cell mitogens and with the p21ras oncoprotein.
S4 566-686 Sentence denotes CaMKIV/ Gr signaling is associated with transcriptional activation of c-fos but is independent of p21ras or calcineurin.
S5 687-855 Sentence denotes AP-1 is an integral component of the nuclear factor of activated T cells (NFAT) transcriptional complex, which is required for interleukin 2 gene expression in T cells.
S6 856-1003 Sentence denotes We demonstrate that CaMKIV/Gr reconstitutes the capacity of the cytosolic component of NFAT to direct transcription from NFAT sites in non-T cells.
S7 1004-1125 Sentence denotes These results reveal a central role for CaMKIV/Gr as a Ca(2+)-regulated activator of gene transcription in T lymphocytes.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-20 protein_molecule denotes Activation protein 1
T2 31-57 other_name denotes transcriptional activation
T3 61-79 DNA_domain_or_region denotes interleukin 2 gene
T4 83-87 atom denotes Ca2+
T5 122-126 atom denotes Ca2+
T6 209-222 cell_type denotes T lymphocytes
T7 264-287 protein_family_or_group denotes T cell antigen receptor
T8 289-292 protein_family_or_group denotes TCR
T9 335-374 other_name denotes Ca(2+)-dependent transcriptional events
T10 387-390 protein_family_or_group denotes TCR
T11 421-430 protein_molecule denotes CaMKIV/Gr
T12 443-463 protein_family_or_group denotes transcription factor
T13 486-490 protein_molecule denotes AP-1
T14 517-532 protein_family_or_group denotes T cell mitogens
T15 546-564 protein_molecule denotes p21ras oncoprotein
T16 566-576 protein_molecule denotes CaMKIV/ Gr
T17 606-632 other_name denotes transcriptional activation
T18 636-641 DNA_domain_or_region denotes c-fos
T19 664-670 DNA_domain_or_region denotes p21ras
T20 674-685 protein_molecule denotes calcineurin
T21 687-691 protein_molecule denotes AP-1
T22 724-751 protein_complex denotes nuclear factor of activated
T23 752-759 cell_type denotes T cells
T24 814-832 DNA_domain_or_region denotes interleukin 2 gene
T25 847-854 cell_type denotes T cells
T26 876-885 protein_molecule denotes CaMKIV/Gr
T27 943-947 protein_complex denotes NFAT
T28 977-981 protein_complex denotes NFAT
T29 995-1002 cell_type denotes T cells
T30 1044-1053 protein_molecule denotes CaMKIV/Gr
T31 1059-1065 atom denotes Ca(2+)
T32 1089-1107 other_name denotes gene transcription
T33 1111-1124 cell_type denotes T lymphocytes