PubMed:8691123
Annnotations
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-20 | protein | denotes | Activation protein 1 |
| T2 | 61-79 | DNA | denotes | interleukin 2 gene |
| T3 | 83-116 | protein | denotes | Ca2+/calmodulin kinase type IV/Gr |
| T4 | 122-180 | protein | denotes | Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr |
| T5 | 209-222 | cell_type | denotes | T lymphocytes |
| T6 | 264-287 | protein | denotes | T cell antigen receptor |
| T7 | 289-292 | protein | denotes | TCR |
| T8 | 387-390 | protein | denotes | TCR |
| T9 | 421-430 | protein | denotes | CaMKIV/Gr |
| T10 | 443-484 | protein | denotes | transcription factor activation protein 1 |
| T11 | 486-490 | protein | denotes | AP-1 |
| T12 | 517-532 | protein | denotes | T cell mitogens |
| T13 | 546-564 | protein | denotes | p21ras oncoprotein |
| T14 | 566-576 | protein | denotes | CaMKIV/ Gr |
| T15 | 636-641 | DNA | denotes | c-fos |
| T16 | 664-670 | DNA | denotes | p21ras |
| T17 | 674-685 | protein | denotes | calcineurin |
| T18 | 687-691 | protein | denotes | AP-1 |
| T19 | 724-790 | protein | denotes | nuclear factor of activated T cells (NFAT) transcriptional complex |
| T20 | 814-832 | DNA | denotes | interleukin 2 gene |
| T21 | 847-854 | cell_type | denotes | T cells |
| T22 | 876-885 | protein | denotes | CaMKIV/Gr |
| T23 | 943-947 | protein | denotes | NFAT |
| T24 | 977-987 | DNA | denotes | NFAT sites |
| T25 | 995-1002 | cell_type | denotes | T cells |
| T26 | 1044-1053 | protein | denotes | CaMKIV/Gr |
| T27 | 1111-1124 | cell_type | denotes | T lymphocytes |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 83-116 | NP | denotes | Ca2+/calmodulin kinase type IV/Gr |
| C2 | 118-180 | NP | denotes | The Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr |
| C3 | 209-222 | NP | denotes | T lymphocytes |
| C4 | 311-313 | NP | denotes | it |
| C5 | 331-374 | NP | denotes | the Ca(2+)-dependent transcriptional events |
| C6 | 375-379 | NP | denotes | that |
| C7 | 421-430 | NP | denotes | CaMKIV/Gr |
| C8 | 439-491 | NP | denotes | the transcription factor activation protein 1 (AP-1) |
| C9 | 542-564 | NP | denotes | the p21ras oncoprotein |
| C10 | 664-670 | NP | denotes | p21ras |
| C11 | 687-691 | NP | denotes | AP-1 |
| C12 | 720-790 | NP | denotes | the nuclear factor of activated T cells (NFAT) transcriptional complex |
| C13 | 792-797 | NP | denotes | which |
| C14 | 876-885 | NP | denotes | CaMKIV/Gr |
| C15 | 1044-1053 | NP | denotes | CaMKIV/Gr |
| C16 | 1111-1124 | NP | denotes | T lymphocytes |
| R1 | C2 | C1 | coref-ident | The Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr,Ca2+/calmodulin kinase type IV/Gr |
| R2 | C4 | C2 | coref-pron | it,The Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr |
| R3 | C6 | C5 | coref-relat | that,the Ca(2+)-dependent transcriptional events |
| R4 | C7 | C2 | coref-ident | CaMKIV/Gr,The Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr |
| R5 | C10 | C9 | coref-ident | p21ras,the p21ras oncoprotein |
| R6 | C11 | C8 | coref-ident | AP-1,the transcription factor activation protein 1 (AP-1) |
| R7 | C13 | C12 | coref-relat | which,the nuclear factor of activated T cells (NFAT) transcriptional complex |
| R8 | C14 | C7 | coref-ident | CaMKIV/Gr,CaMKIV/Gr |
| R9 | C15 | C14 | coref-ident | CaMKIV/Gr,CaMKIV/Gr |
| R10 | C16 | C3 | coref-ident | T lymphocytes,T lymphocytes |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-117 | Sentence | denotes | Activation protein 1-dependent transcriptional activation of interleukin 2 gene by Ca2+/calmodulin kinase type IV/Gr. |
| S2 | 118-402 | Sentence | denotes | The Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr is selectively expressed in T lymphocytes and is activated after signaling via the T cell antigen receptor (TCR), indicating that it mediates some of the Ca(2+)-dependent transcriptional events that follow TCR engagement. |
| S3 | 403-565 | Sentence | denotes | Here we show that CaMKIV/Gr induces the transcription factor activation protein 1 (AP-1) alone or in synergy with T cell mitogens and with the p21ras oncoprotein. |
| S4 | 566-686 | Sentence | denotes | CaMKIV/ Gr signaling is associated with transcriptional activation of c-fos but is independent of p21ras or calcineurin. |
| S5 | 687-855 | Sentence | denotes | AP-1 is an integral component of the nuclear factor of activated T cells (NFAT) transcriptional complex, which is required for interleukin 2 gene expression in T cells. |
| S6 | 856-1003 | Sentence | denotes | We demonstrate that CaMKIV/Gr reconstitutes the capacity of the cytosolic component of NFAT to direct transcription from NFAT sites in non-T cells. |
| S7 | 1004-1125 | Sentence | denotes | These results reveal a central role for CaMKIV/Gr as a Ca(2+)-regulated activator of gene transcription in T lymphocytes. |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-20 | protein_molecule | denotes | Activation protein 1 |
| T2 | 31-57 | other_name | denotes | transcriptional activation |
| T3 | 61-79 | DNA_domain_or_region | denotes | interleukin 2 gene |
| T4 | 83-87 | atom | denotes | Ca2+ |
| T5 | 122-126 | atom | denotes | Ca2+ |
| T6 | 209-222 | cell_type | denotes | T lymphocytes |
| T7 | 264-287 | protein_family_or_group | denotes | T cell antigen receptor |
| T8 | 289-292 | protein_family_or_group | denotes | TCR |
| T9 | 335-374 | other_name | denotes | Ca(2+)-dependent transcriptional events |
| T10 | 387-390 | protein_family_or_group | denotes | TCR |
| T11 | 421-430 | protein_molecule | denotes | CaMKIV/Gr |
| T12 | 443-463 | protein_family_or_group | denotes | transcription factor |
| T13 | 486-490 | protein_molecule | denotes | AP-1 |
| T14 | 517-532 | protein_family_or_group | denotes | T cell mitogens |
| T15 | 546-564 | protein_molecule | denotes | p21ras oncoprotein |
| T16 | 566-576 | protein_molecule | denotes | CaMKIV/ Gr |
| T17 | 606-632 | other_name | denotes | transcriptional activation |
| T18 | 636-641 | DNA_domain_or_region | denotes | c-fos |
| T19 | 664-670 | DNA_domain_or_region | denotes | p21ras |
| T20 | 674-685 | protein_molecule | denotes | calcineurin |
| T21 | 687-691 | protein_molecule | denotes | AP-1 |
| T22 | 724-751 | protein_complex | denotes | nuclear factor of activated |
| T23 | 752-759 | cell_type | denotes | T cells |
| T24 | 814-832 | DNA_domain_or_region | denotes | interleukin 2 gene |
| T25 | 847-854 | cell_type | denotes | T cells |
| T26 | 876-885 | protein_molecule | denotes | CaMKIV/Gr |
| T27 | 943-947 | protein_complex | denotes | NFAT |
| T28 | 977-981 | protein_complex | denotes | NFAT |
| T29 | 995-1002 | cell_type | denotes | T cells |
| T30 | 1044-1053 | protein_molecule | denotes | CaMKIV/Gr |
| T31 | 1059-1065 | atom | denotes | Ca(2+) |
| T32 | 1089-1107 | other_name | denotes | gene transcription |
| T33 | 1111-1124 | cell_type | denotes | T lymphocytes |