PubMed:8182079
Annnotations
ggdb-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 106-113 | https://acgg.asia/db/ggdb/info/gg003 | denotes | Lewis x |
| T2 | 106-113 | https://acgg.asia/db/ggdb/info/gg004 | denotes | Lewis x |
| T3 | 106-113 | https://acgg.asia/db/ggdb/info/gg005 | denotes | Lewis x |
| T4 | 106-113 | https://acgg.asia/db/ggdb/info/gg006 | denotes | Lewis x |
| T5 | 106-113 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Lewis x |
| T6 | 106-113 | https://acgg.asia/db/ggdb/info/gg008 | denotes | Lewis x |
| T7 | 166-173 | https://acgg.asia/db/ggdb/info/gg003 | denotes | Lewis x |
| T8 | 166-173 | https://acgg.asia/db/ggdb/info/gg004 | denotes | Lewis x |
| T9 | 166-173 | https://acgg.asia/db/ggdb/info/gg005 | denotes | Lewis x |
| T10 | 166-173 | https://acgg.asia/db/ggdb/info/gg006 | denotes | Lewis x |
| T11 | 166-173 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Lewis x |
| T12 | 166-173 | https://acgg.asia/db/ggdb/info/gg008 | denotes | Lewis x |
| T13 | 522-530 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| T14 | 722-730 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| T15 | 1049-1057 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| T16 | 1119-1127 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| T17 | 1313-1321 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| T18 | 1355-1362 | https://acgg.asia/db/ggdb/info/gg004 | denotes | Fuc-TIV |
| T19 | 1418-1426 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| T20 | 1534-1541 | https://acgg.asia/db/ggdb/info/gg004 | denotes | Fuc-TIV |
| T21 | 1588-1596 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 99-113 | Glycan_Motif | denotes | sialyl Lewis x | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO |
| T2 | 106-113 | Glycan_Motif | denotes | Lewis x | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO |
| T4 | 159-173 | Glycan_Motif | denotes | sialyl Lewis x | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO |
| T5 | 166-173 | Glycan_Motif | denotes | Lewis x | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO |
| T7 | 842-853 | Glycan_Motif | denotes | sialic acid | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
GGDB-2020
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 106-113 | https://acgg.asia/db/ggdb/info/gg004 | denotes | Lewis x |
| T2 | 106-113 | https://acgg.asia/db/ggdb/info/gg005 | denotes | Lewis x |
| T3 | 106-113 | https://acgg.asia/db/ggdb/info/gg006 | denotes | Lewis x |
| T4 | 106-113 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Lewis x |
| T5 | 106-113 | https://acgg.asia/db/ggdb/info/gg008 | denotes | Lewis x |
| T6 | 106-113 | https://acgg.asia/db/ggdb/info/gg003 | denotes | Lewis x |
| T7 | 166-173 | https://acgg.asia/db/ggdb/info/gg004 | denotes | Lewis x |
| T8 | 166-173 | https://acgg.asia/db/ggdb/info/gg005 | denotes | Lewis x |
| T9 | 166-173 | https://acgg.asia/db/ggdb/info/gg006 | denotes | Lewis x |
| T10 | 166-173 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Lewis x |
| T11 | 166-173 | https://acgg.asia/db/ggdb/info/gg008 | denotes | Lewis x |
| T12 | 166-173 | https://acgg.asia/db/ggdb/info/gg003 | denotes | Lewis x |
| T13 | 522-530 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| T14 | 722-730 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| T15 | 1049-1057 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| T16 | 1119-1127 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| T17 | 1313-1321 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| T18 | 1355-1362 | https://acgg.asia/db/ggdb/info/gg004 | denotes | Fuc-TIV |
| T19 | 1418-1426 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| T20 | 1534-1541 | https://acgg.asia/db/ggdb/info/gg004 | denotes | Fuc-TIV |
| T21 | 1588-1596 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-154 | Sentence | denotes | Expression cloning of a novel alpha 1,3-fucosyltransferase that is involved in biosynthesis of the sialyl Lewis x carbohydrate determinants in leukocytes. |
| T2 | 155-342 | Sentence | denotes | The sialyl Lewis x (NeuAc alpha 2-3Gal beta 1-4(Fuc alpha 1-3)Glc-NAc) determinants serve as ligands in the selectin-mediated adhesion of leukocytes to activated endothelium or platelets. |
| T3 | 343-669 | Sentence | denotes | In our efforts to identify glycosyltransferases involved in the biosynthesis of those ligands, we achieved expression cloning of a novel human alpha 1,3-fucosyltransferase termed Fuc-TVII from a THP-1 cDNA library by enrichment of the Namalwa cells highly expressing that determinant with a fluorescence-activated cell sorter. |
| T4 | 670-929 | Sentence | denotes | Expression of the COOH-terminal catalytic domain of Fuc-TVII showed an alpha 1,3-fucosyltransferase activity for a type II oligosaccharide with a terminal alpha 2,3-linked sialic acid among various acceptors, consistent with that in vivo acceptor specificity. |
| T5 | 930-1198 | Sentence | denotes | Alignment of the primary sequences of five alpha 1,3-fucosyltransferases and assignment of the chromosomal location of Fuc-TVII gene, together with that acceptor specificity, indicate that Fuc-TVII consists of a unique class of the alpha 1,3-fucosyltransferase family. |
| T6 | 1199-1417 | Sentence | denotes | Determination of the expression levels of these alpha 1,3-fucosyltransferases in various cells revealed that both Fuc-TVII and a myeloid fucosyltransferase Fuc-TIV were significantly expressed in myeloid lineage cells. |
| T7 | 1418-1560 | Sentence | denotes | Fuc-TVII-transfected Namalwa cells exhibited significant binding to E-selectin in contrast to little binding of the Fuc-TIV-transfected cells. |
| T8 | 1561-1657 | Sentence | denotes | These results suggest that Fuc-TVII may participate in the biosynthesis of the selectin ligands. |
| T1 | 0-154 | Sentence | denotes | Expression cloning of a novel alpha 1,3-fucosyltransferase that is involved in biosynthesis of the sialyl Lewis x carbohydrate determinants in leukocytes. |
| T2 | 155-342 | Sentence | denotes | The sialyl Lewis x (NeuAc alpha 2-3Gal beta 1-4(Fuc alpha 1-3)Glc-NAc) determinants serve as ligands in the selectin-mediated adhesion of leukocytes to activated endothelium or platelets. |
| T3 | 343-669 | Sentence | denotes | In our efforts to identify glycosyltransferases involved in the biosynthesis of those ligands, we achieved expression cloning of a novel human alpha 1,3-fucosyltransferase termed Fuc-TVII from a THP-1 cDNA library by enrichment of the Namalwa cells highly expressing that determinant with a fluorescence-activated cell sorter. |
| T4 | 670-929 | Sentence | denotes | Expression of the COOH-terminal catalytic domain of Fuc-TVII showed an alpha 1,3-fucosyltransferase activity for a type II oligosaccharide with a terminal alpha 2,3-linked sialic acid among various acceptors, consistent with that in vivo acceptor specificity. |
| T5 | 930-1198 | Sentence | denotes | Alignment of the primary sequences of five alpha 1,3-fucosyltransferases and assignment of the chromosomal location of Fuc-TVII gene, together with that acceptor specificity, indicate that Fuc-TVII consists of a unique class of the alpha 1,3-fucosyltransferase family. |
| T6 | 1199-1417 | Sentence | denotes | Determination of the expression levels of these alpha 1,3-fucosyltransferases in various cells revealed that both Fuc-TVII and a myeloid fucosyltransferase Fuc-TIV were significantly expressed in myeloid lineage cells. |
| T7 | 1418-1560 | Sentence | denotes | Fuc-TVII-transfected Namalwa cells exhibited significant binding to E-selectin in contrast to little binding of the Fuc-TIV-transfected cells. |
| T8 | 1561-1657 | Sentence | denotes | These results suggest that Fuc-TVII may participate in the biosynthesis of the selectin ligands. |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 99-113 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sialyl Lewis x |
| T2 | 106-113 | https://glytoucan.org/Structures/Glycans/G00051MO | denotes | Lewis x |
| T3 | 106-113 | https://glytoucan.org/Structures/Glycans/G01187XC | denotes | Lewis x |
| T4 | 159-173 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sialyl Lewis x |
| T5 | 166-173 | https://glytoucan.org/Structures/Glycans/G00051MO | denotes | Lewis x |
| T6 | 166-173 | https://glytoucan.org/Structures/Glycans/G01187XC | denotes | Lewis x |
| T7 | 842-853 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | sialic acid |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 99-113 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sialyl Lewis x |
| T2 | 106-113 | http://www.glycoepitope.jp/epitopes/EP0011 | denotes | Lewis x |
| T3 | 159-173 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sialyl Lewis x |
| T4 | 166-173 | http://www.glycoepitope.jp/epitopes/EP0011 | denotes | Lewis x |
glycogenes
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoGenes20190927-B_T1 | 522-530 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| PD-GlycoGenes20190927-B_T2 | 722-730 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| PD-GlycoGenes20190927-B_T3 | 790-792 | https://acgg.asia/db/ggdb/info/gg111 | denotes | II |
| PD-GlycoGenes20190927-B_T4 | 1049-1057 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| PD-GlycoGenes20190927-B_T5 | 1119-1127 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| PD-GlycoGenes20190927-B_T6 | 1313-1321 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| PD-GlycoGenes20190927-B_T7 | 1355-1362 | https://acgg.asia/db/ggdb/info/gg004 | denotes | Fuc-TIV |
| PD-GlycoGenes20190927-B_T8 | 1418-1426 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
| PD-GlycoGenes20190927-B_T9 | 1534-1541 | https://acgg.asia/db/ggdb/info/gg004 | denotes | Fuc-TIV |
| PD-GlycoGenes20190927-B_T10 | 1588-1596 | https://acgg.asia/db/ggdb/info/gg007 | denotes | Fuc-TVII |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 106-113 | Glycan | denotes | Lewis x | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO |
| T2 | 166-173 | Glycan | denotes | Lewis x | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 480-485 | OrganismTaxon | denotes | human | 9606 |
Glycosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 99-113 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sialyl Lewis x | http://www.glycoepitope.jp/epitopes/EP0012 |
| T2 | 159-173 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sialyl Lewis x | http://www.glycoepitope.jp/epitopes/EP0012 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 143-153 | Body_part | denotes | leukocytes | http://purl.obolibrary.org/obo/CL_0000738 |
| T2 | 293-303 | Body_part | denotes | leukocytes | http://purl.obolibrary.org/obo/CL_0000738 |
| T3 | 317-328 | Body_part | denotes | endothelium | http://purl.obolibrary.org/obo/UBERON_0001986 |
| T4 | 332-341 | Body_part | denotes | platelets | http://purl.obolibrary.org/obo/CL_0000233 |
Glycosmos15-CL
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 143-153 | Cell | denotes | leukocytes | http://purl.obolibrary.org/obo/CL:0000738 |
| T2 | 293-303 | Cell | denotes | leukocytes | http://purl.obolibrary.org/obo/CL:0000738 |
| T3 | 332-341 | Cell | denotes | platelets | http://purl.obolibrary.org/obo/CL:0000233 |