PubMed:7969146
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/7969146","sourcedb":"PubMed","sourceid":"7969146","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/7969146","text":"Identification of a region which directs the monocytic activity of the colony-stimulating factor 1 (macrophage colony-stimulating factor) receptor promoter and binds PEBP2/CBF (AML1).\nThe receptor for the macrophage colony-stimulating factor (or colony-stimulating factor 1 [CSF-1]) is expressed from different promoters in monocytic cells and placental trophoblasts. We have demonstrated that the monocyte-specific expression of the CSF-1 receptor is regulated at the level of transcription by a tissue-specific promoter whose activity is stimulated by the monocyte/B-cell-specific transcription factor PU.1 (D.-E. Zhang, C.J. Hetherington, H.-M. Chen, and D.G. Tenen, Mol. Cell. Biol. 14:373-381, 1994). Here we report that the tissue specificity of this promoter is also mediated by sequences in a region II (bp -88 to -59), which lies 10 bp upstream from the PU.1-binding site. When analyzed by DNase footprinting, region II was protected preferentially in monocytic cells. Electrophoretic mobility shift assays confirmed that region II interacts specifically with nuclear proteins from monocytic cells. Two gel shift complexes (Mono A and Mono B) were formed with separate sequence elements within this region. Competition and supershift experiments indicate that Mono B contains a member of the polyomavirus enhancer-binding protein 2/core-binding factor (PEBP2/CBF) family, which includes the AML1 gene product, while Mono A is a distinct complex preferentially expressed in monocytic cells. Promoter constructs with mutations in these sequence elements were no longer expressed specifically in monocytes. Furthermore, multimerized region II sequence elements enhanced the activity of a heterologous thymidine kinase promoter in monocytic cells but not other cell types tested. These results indicate that the monocyte/B-cell-specific transcription factor PU.1 and the Mono A and Mono B protein complexes act in concert to regulate monocyte-specific transcription of the CSF-1 receptor.","tracks":[{"project":"genia-medco-coref","denotations":[{"id":"C1","span":{"begin":18,"end":26},"obj":"NP"},{"id":"C2","span":{"begin":27,"end":32},"obj":"NP"},{"id":"C3","span":{"begin":184,"end":282},"obj":"NP"},{"id":"C4","span":{"begin":324,"end":339},"obj":"NP"},{"id":"C6","span":{"begin":430,"end":448},"obj":"NP"},{"id":"C5","span":{"begin":394,"end":448},"obj":"NP"},{"id":"C7","span":{"begin":495,"end":521},"obj":"NP"},{"id":"C8","span":{"begin":522,"end":527},"obj":"NP"},{"id":"C9","span":{"begin":554,"end":608},"obj":"NP"},{"id":"C10","span":{"begin":752,"end":765},"obj":"NP"},{"id":"C11","span":{"begin":799,"end":826},"obj":"NP"},{"id":"C12","span":{"begin":828,"end":833},"obj":"NP"},{"id":"C13","span":{"begin":919,"end":928},"obj":"NP"},{"id":"C14","span":{"begin":961,"end":976},"obj":"NP"},{"id":"C15","span":{"begin":1031,"end":1040},"obj":"NP"},{"id":"C16","span":{"begin":1091,"end":1106},"obj":"NP"},{"id":"C17","span":{"begin":1108,"end":1151},"obj":"NP"},{"id":"C19","span":{"begin":1203,"end":1214},"obj":"NP"},{"id":"C18","span":{"begin":1169,"end":1214},"obj":"NP"},{"id":"C20","span":{"begin":1297,"end":1379},"obj":"NP"},{"id":"C21","span":{"begin":1381,"end":1386},"obj":"NP"},{"id":"C22","span":{"begin":1482,"end":1497},"obj":"NP"},{"id":"C23","span":{"begin":1537,"end":1560},"obj":"NP"},{"id":"C24","span":{"begin":1736,"end":1751},"obj":"NP"},{"id":"C25","span":{"begin":1813,"end":1867},"obj":"NP"},{"id":"C26","span":{"begin":1872,"end":1911},"obj":"NP"},{"id":"C28","span":{"begin":1974,"end":1992},"obj":"NP"},{"id":"C27","span":{"begin":1939,"end":1992},"obj":"NP"}],"relations":[{"id":"R1","pred":"coref-relat","subj":"C2","obj":"C1"},{"id":"R2","pred":"coref-ident","subj":"C6","obj":"C3"},{"id":"R3","pred":"coref-relat","subj":"C8","obj":"C7"},{"id":"R4","pred":"coref-ident","subj":"C10","obj":"C7"},{"id":"R5","pred":"coref-relat","subj":"C12","obj":"C11"},{"id":"R6","pred":"coref-ident","subj":"C13","obj":"C11"},{"id":"R7","pred":"coref-ident","subj":"C14","obj":"C4"},{"id":"R8","pred":"coref-ident","subj":"C15","obj":"C13"},{"id":"R9","pred":"coref-ident","subj":"C16","obj":"C14"},{"id":"R10","pred":"coref-ident","subj":"C19","obj":"C15"},{"id":"R11","pred":"coref-relat","subj":"C21","obj":"C20"},{"id":"R12","pred":"coref-ident","subj":"C22","obj":"C16"},{"id":"R13","pred":"coref-ident","subj":"C23","obj":"C18"},{"id":"R14","pred":"coref-ident","subj":"C24","obj":"C22"},{"id":"R15","pred":"coref-ident","subj":"C25","obj":"C9"},{"id":"R16","pred":"coref-ident","subj":"C26","obj":"C17"},{"id":"R17","pred":"coref-ident","subj":"C28","obj":"C6"},{"id":"R18","pred":"coref-ident","subj":"C27","obj":"C5"}],"attributes":[{"subj":"C1","pred":"source","obj":"genia-medco-coref"},{"subj":"C2","pred":"source","obj":"genia-medco-coref"},{"subj":"C3","pred":"source","obj":"genia-medco-coref"},{"subj":"C4","pred":"source","obj":"genia-medco-coref"},{"subj":"C6","pred":"source","obj":"genia-medco-coref"},{"subj":"C5","pred":"source","obj":"genia-medco-coref"},{"subj":"C7","pred":"source","obj":"genia-medco-coref"},{"subj":"C8","pred":"source","obj":"genia-medco-coref"},{"subj":"C9","pred":"source","obj":"genia-medco-coref"},{"subj":"C10","pred":"source","obj":"genia-medco-coref"},{"subj":"C11","pred":"source","obj":"genia-medco-coref"},{"subj":"C12","pred":"source","obj":"genia-medco-coref"},{"subj":"C13","pred":"source","obj":"genia-medco-coref"},{"subj":"C14","pred":"source","obj":"genia-medco-coref"},{"subj":"C15","pred":"source","obj":"genia-medco-coref"},{"subj":"C16","pred":"source","obj":"genia-medco-coref"},{"subj":"C17","pred":"source","obj":"genia-medco-coref"},{"subj":"C19","pred":"source","obj":"genia-medco-coref"},{"subj":"C18","pred":"source","obj":"genia-medco-coref"},{"subj":"C20","pred":"source","obj":"genia-medco-coref"},{"subj":"C21","pred":"source","obj":"genia-medco-coref"},{"subj":"C22","pred":"source","obj":"genia-medco-coref"},{"subj":"C23","pred":"source","obj":"genia-medco-coref"},{"subj":"C24","pred":"source","obj":"genia-medco-coref"},{"subj":"C25","pred":"source","obj":"genia-medco-coref"},{"subj":"C26","pred":"source","obj":"genia-medco-coref"},{"subj":"C28","pred":"source","obj":"genia-medco-coref"},{"subj":"C27","pred":"source","obj":"genia-medco-coref"}]},{"project":"semrep-sample","denotations":[{"id":"E1-ti-1","span":{"begin":20,"end":26},"obj":"cui:C0205147"},{"id":"E2-ti-1","span":{"begin":45,"end":54},"obj":"cui:C0026473"},{"id":"E3-ti-1","span":{"begin":55,"end":63},"obj":"cui:C0439167"},{"id":"E4-ti-1","span":{"begin":71,"end":98},"obj":"cui:C0079784"},{"id":"E5-ti-1","span":{"begin":100,"end":136},"obj":"cui:C0079784"},{"id":"E6-ti-1","span":{"begin":138,"end":146},"obj":"cui:C0597357"},{"id":"E7-ti-1","span":{"begin":166,"end":175},"obj":"cui:C0669679"},{"id":"E8-ti-1","span":{"begin":166,"end":175},"obj":"cui:C0212320"},{"id":"E9-ti-1","span":{"begin":177,"end":181},"obj":"cui:C0215508"},{"id":"T1","span":{"begin":166,"end":181},"obj":"ISA"},{"id":"T2","span":{"begin":160,"end":165},"obj":"INTERACTS_WITH"},{"id":"T3","span":{"begin":166,"end":181},"obj":"INTERACTS_WITH"},{"id":"E1-ab-1","span":{"begin":188,"end":196},"obj":"cui:C0597357"},{"id":"E2-ab-1","span":{"begin":205,"end":241},"obj":"cui:C0079784"},{"id":"E3-ab-1","span":{"begin":246,"end":273},"obj":"cui:C0079784"},{"id":"E4-ab-1","span":{"begin":275,"end":280},"obj":"cui:C0079784"},{"id":"E5-ab-1","span":{"begin":301,"end":310},"obj":"cui:C1547020"},{"id":"E6-ab-1","span":{"begin":311,"end":320},"obj":"cui:C0086860"},{"id":"E7-ab-1","span":{"begin":324,"end":333},"obj":"cui:C0026473"},{"id":"E8-ab-1","span":{"begin":334,"end":339},"obj":"cui:C0007634"},{"id":"E9-ab-1","span":{"begin":344,"end":353},"obj":"cui:C0230956"},{"id":"E10-ab-1","span":{"begin":354,"end":366},"obj":"cui:C0041178"},{"id":"T4","span":{"begin":321,"end":323},"obj":"LOCATION_OF"},{"id":"T5","span":{"begin":321,"end":323},"obj":"LOCATION_OF"},{"id":"T6","span":{"begin":344,"end":366},"obj":"PART_OF"},{"id":"E1-ab-2","span":{"begin":398,"end":406},"obj":"cui:C0026473"},{"id":"E2-ab-2","span":{"begin":416,"end":426},"obj":"cui:C0185117"},{"id":"E3-ab-2","span":{"begin":434,"end":448},"obj":"cui:C0080092"},{"id":"E4-ab-2","span":{"begin":478,"end":491},"obj":"cui:C0040649"},{"id":"E5-ab-2","span":{"begin":528,"end":536},"obj":"cui:C0439167"},{"id":"E6-ab-2","span":{"begin":567,"end":603},"obj":"cui:C0167636"},{"id":"E7-ab-2","span":{"begin":558,"end":608},"obj":"cui:C0079785"},{"id":"T7","span":{"begin":452,"end":461},"obj":"AFFECTS"},{"id":"E1-ab-5","span":{"begin":648,"end":652},"obj":"cui:C0999213"},{"id":"E2-ab-5","span":{"begin":658,"end":661},"obj":"cui:C0719614"},{"id":"E1-ab-6","span":{"begin":670,"end":673},"obj":"cui:C0324740"},{"id":"E1-ab-7","span":{"begin":675,"end":679},"obj":"cui:C0007634"},{"id":"E1-ab-10","span":{"begin":737,"end":748},"obj":"cui:C0037791"},{"id":"E2-ab-10","span":{"begin":786,"end":795},"obj":"cui:C0162326"},{"id":"E3-ab-10","span":{"begin":801,"end":807},"obj":"cui:C0205147"},{"id":"E4-ab-10","span":{"begin":845,"end":853},"obj":"cui:C0522505"},{"id":"E5-ab-10","span":{"begin":868,"end":880},"obj":"cui:C0005456"},{"id":"E1-ab-11","span":{"begin":899,"end":904},"obj":"cui:C0011519"},{"id":"E2-ab-11","span":{"begin":919,"end":925},"obj":"cui:C0205147"},{"id":"E3-ab-11","span":{"begin":961,"end":970},"obj":"cui:C0026473"},{"id":"E4-ab-11","span":{"begin":971,"end":976},"obj":"cui:C0007634"},{"id":"E1-ab-12","span":{"begin":978,"end":1015},"obj":"cui:C0949632"},{"id":"E2-ab-12","span":{"begin":1031,"end":1037},"obj":"cui:C0205147"},{"id":"E3-ab-12","span":{"begin":1069,"end":1085},"obj":"cui:C0028589"},{"id":"E4-ab-12","span":{"begin":1091,"end":1100},"obj":"cui:C0026473"},{"id":"E5-ab-12","span":{"begin":1101,"end":1106},"obj":"cui:C0007634"},{"id":"T8","span":{"begin":1086,"end":1090},"obj":"LOCATION_OF"},{"id":"E1-ab-13","span":{"begin":1108,"end":1111},"obj":"cui:C0205448"},{"id":"E2-ab-13","span":{"begin":1112,"end":1115},"obj":"cui:C0017243"},{"id":"E3-ab-13","span":{"begin":1122,"end":1131},"obj":"cui:C0439855"},{"id":"E4-ab-13","span":{"begin":1169,"end":1177},"obj":"cui:C0443299"},{"id":"E5-ab-13","span":{"begin":1178,"end":1186},"obj":"cui:C1519249"},{"id":"E6-ab-13","span":{"begin":1187,"end":1195},"obj":"cui:C0013879"},{"id":"E7-ab-13","span":{"begin":1208,"end":1214},"obj":"cui:C0205147"},{"id":"E1-ab-14","span":{"begin":1216,"end":1227},"obj":"cui:C0679932"},{"id":"E2-ab-14","span":{"begin":1243,"end":1254},"obj":"cui:C0681814"},{"id":"E3-ab-14","span":{"begin":1287,"end":1293},"obj":"cui:C0680022"},{"id":"E4-ab-14","span":{"begin":1301,"end":1340},"obj":"cui:C0212320"},{"id":"E5-ab-14","span":{"begin":1341,"end":1345},"obj":"cui:C1167518"},{"id":"E6-ab-14","span":{"begin":1354,"end":1360},"obj":"cui:C1521761"},{"id":"E7-ab-14","span":{"begin":1373,"end":1379},"obj":"cui:C0015576"},{"id":"E8-ab-14","span":{"begin":1400,"end":1404},"obj":"cui:C1335654"},{"id":"E9-ab-14","span":{"begin":1405,"end":1417},"obj":"cui:C0033684"},{"id":"E10-ab-14","span":{"begin":1446,"end":1453},"obj":"cui:C0439855"},{"id":"E11-ab-14","span":{"begin":1482,"end":1491},"obj":"cui:C0026473"},{"id":"E12-ab-14","span":{"begin":1492,"end":1497},"obj":"cui:C0007634"},{"id":"T9","span":{"begin":1400,"end":1417},"obj":"ISA"},{"id":"T10","span":{"begin":1469,"end":1478},"obj":"PART_OF"},{"id":"T11","span":{"begin":1400,"end":1417},"obj":"PART_OF"},{"id":"E1-ab-15","span":{"begin":1524,"end":1533},"obj":"cui:C0026882"},{"id":"E2-ab-15","span":{"begin":1543,"end":1551},"obj":"cui:C1519249"},{"id":"E3-ab-15","span":{"begin":1552,"end":1560},"obj":"cui:C0013879"},{"id":"E4-ab-15","span":{"begin":1569,"end":1575},"obj":"cui:C0205166"},{"id":"E5-ab-15","span":{"begin":1602,"end":1611},"obj":"cui:C0026473"},{"id":"E1-ab-16","span":{"begin":1639,"end":1645},"obj":"cui:C0205147"},{"id":"E2-ab-16","span":{"begin":1649,"end":1657},"obj":"cui:C1519249"},{"id":"E3-ab-16","span":{"begin":1658,"end":1666},"obj":"cui:C0013879"},{"id":"E4-ab-16","span":{"begin":1680,"end":1688},"obj":"cui:C0439167"},{"id":"E5-ab-16","span":{"begin":1694,"end":1706},"obj":"cui:C0439860"},{"id":"E6-ab-16","span":{"begin":1707,"end":1723},"obj":"cui:C0040078"},{"id":"E7-ab-16","span":{"begin":1736,"end":1745},"obj":"cui:C0026473"},{"id":"E8-ab-16","span":{"begin":1746,"end":1751},"obj":"cui:C0007634"},{"id":"E9-ab-16","span":{"begin":1756,"end":1759},"obj":"cui:C1518422"},{"id":"E10-ab-16","span":{"begin":1766,"end":1776},"obj":"cui:C0007634"},{"id":"T12","span":{"begin":1733,"end":1735},"obj":"LOCATION_OF"},{"id":"E1-ab-17","span":{"begin":1791,"end":1798},"obj":"cui:C1274040"},{"id":"E2-ab-17","span":{"begin":1826,"end":1862},"obj":"cui:C0167636"},{"id":"E3-ab-17","span":{"begin":1817,"end":1867},"obj":"cui:C0079785"},{"id":"E4-ab-17","span":{"begin":1894,"end":1911},"obj":"cui:C1180347"},{"id":"E5-ab-17","span":{"begin":1939,"end":1947},"obj":"cui:C0026473"},{"id":"E6-ab-17","span":{"begin":1957,"end":1970},"obj":"cui:C0040649"},{"id":"E7-ab-17","span":{"begin":1978,"end":1992},"obj":"cui:C0080092"},{"id":"T13","span":{"begin":1930,"end":1938},"obj":"INTERACTS_WITH"}],"relations":[{"id":"R1","pred":"subjectOf","subj":"E9-ti-1","obj":"T1"},{"id":"R2","pred":"objectOf","subj":"E8-ti-1","obj":"T1"},{"id":"R3","pred":"subjectOf","subj":"E4-ti-1","obj":"T2"},{"id":"R4","pred":"objectOf","subj":"E8-ti-1","obj":"T2"},{"id":"R5","pred":"subjectOf","subj":"E4-ti-1","obj":"T3"},{"id":"R6","pred":"objectOf","subj":"E9-ti-1","obj":"T3"},{"id":"R7","pred":"subjectOf","subj":"E8-ab-1","obj":"T4"},{"id":"R8","pred":"objectOf","subj":"E2-ab-1","obj":"T4"},{"id":"R9","pred":"subjectOf","subj":"E10-ab-1","obj":"T5"},{"id":"R10","pred":"objectOf","subj":"E2-ab-1","obj":"T5"},{"id":"R11","pred":"subjectOf","subj":"E10-ab-1","obj":"T6"},{"id":"R12","pred":"objectOf","subj":"E9-ab-1","obj":"T6"},{"id":"R13","pred":"subjectOf","subj":"E3-ab-2","obj":"T7"},{"id":"R14","pred":"objectOf","subj":"E4-ab-2","obj":"T7"},{"id":"R15","pred":"subjectOf","subj":"E5-ab-12","obj":"T8"},{"id":"R16","pred":"objectOf","subj":"E3-ab-12","obj":"T8"},{"id":"R17","pred":"subjectOf","subj":"E8-ab-14","obj":"T9"},{"id":"R18","pred":"objectOf","subj":"E9-ab-14","obj":"T9"},{"id":"R19","pred":"subjectOf","subj":"E9-ab-14","obj":"T10"},{"id":"R20","pred":"objectOf","subj":"E12-ab-14","obj":"T10"},{"id":"R21","pred":"subjectOf","subj":"E8-ab-14","obj":"T11"},{"id":"R22","pred":"objectOf","subj":"E12-ab-14","obj":"T11"},{"id":"R23","pred":"subjectOf","subj":"E8-ab-16","obj":"T12"},{"id":"R24","pred":"objectOf","subj":"E6-ab-16","obj":"T12"},{"id":"R25","pred":"subjectOf","subj":"E4-ab-17","obj":"T13"},{"id":"R26","pred":"objectOf","subj":"E7-ab-17","obj":"T13"}],"attributes":[{"subj":"E1-ti-1","pred":"source","obj":"semrep-sample"},{"subj":"E2-ti-1","pred":"source","obj":"semrep-sample"},{"subj":"E3-ti-1","pred":"source","obj":"semrep-sample"},{"subj":"E4-ti-1","pred":"source","obj":"semrep-sample"},{"subj":"E5-ti-1","pred":"source","obj":"semrep-sample"},{"subj":"E6-ti-1","pred":"source","obj":"semrep-sample"},{"subj":"E7-ti-1","pred":"source","obj":"semrep-sample"},{"subj":"E8-ti-1","pred":"source","obj":"semrep-sample"},{"subj":"E9-ti-1","pred":"source","obj":"semrep-sample"},{"subj":"T1","pred":"source","obj":"semrep-sample"},{"subj":"T2","pred":"source","obj":"semrep-sample"},{"subj":"T3","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-1","pred":"source","obj":"semrep-sample"},{"subj":"E2-ab-1","pred":"source","obj":"semrep-sample"},{"subj":"E3-ab-1","pred":"source","obj":"semrep-sample"},{"subj":"E4-ab-1","pred":"source","obj":"semrep-sample"},{"subj":"E5-ab-1","pred":"source","obj":"semrep-sample"},{"subj":"E6-ab-1","pred":"source","obj":"semrep-sample"},{"subj":"E7-ab-1","pred":"source","obj":"semrep-sample"},{"subj":"E8-ab-1","pred":"source","obj":"semrep-sample"},{"subj":"E9-ab-1","pred":"source","obj":"semrep-sample"},{"subj":"E10-ab-1","pred":"source","obj":"semrep-sample"},{"subj":"T4","pred":"source","obj":"semrep-sample"},{"subj":"T5","pred":"source","obj":"semrep-sample"},{"subj":"T6","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-2","pred":"source","obj":"semrep-sample"},{"subj":"E2-ab-2","pred":"source","obj":"semrep-sample"},{"subj":"E3-ab-2","pred":"source","obj":"semrep-sample"},{"subj":"E4-ab-2","pred":"source","obj":"semrep-sample"},{"subj":"E5-ab-2","pred":"source","obj":"semrep-sample"},{"subj":"E6-ab-2","pred":"source","obj":"semrep-sample"},{"subj":"E7-ab-2","pred":"source","obj":"semrep-sample"},{"subj":"T7","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-5","pred":"source","obj":"semrep-sample"},{"subj":"E2-ab-5","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-6","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-7","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-10","pred":"source","obj":"semrep-sample"},{"subj":"E2-ab-10","pred":"source","obj":"semrep-sample"},{"subj":"E3-ab-10","pred":"source","obj":"semrep-sample"},{"subj":"E4-ab-10","pred":"source","obj":"semrep-sample"},{"subj":"E5-ab-10","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-11","pred":"source","obj":"semrep-sample"},{"subj":"E2-ab-11","pred":"source","obj":"semrep-sample"},{"subj":"E3-ab-11","pred":"source","obj":"semrep-sample"},{"subj":"E4-ab-11","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-12","pred":"source","obj":"semrep-sample"},{"subj":"E2-ab-12","pred":"source","obj":"semrep-sample"},{"subj":"E3-ab-12","pred":"source","obj":"semrep-sample"},{"subj":"E4-ab-12","pred":"source","obj":"semrep-sample"},{"subj":"E5-ab-12","pred":"source","obj":"semrep-sample"},{"subj":"T8","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-13","pred":"source","obj":"semrep-sample"},{"subj":"E2-ab-13","pred":"source","obj":"semrep-sample"},{"subj":"E3-ab-13","pred":"source","obj":"semrep-sample"},{"subj":"E4-ab-13","pred":"source","obj":"semrep-sample"},{"subj":"E5-ab-13","pred":"source","obj":"semrep-sample"},{"subj":"E6-ab-13","pred":"source","obj":"semrep-sample"},{"subj":"E7-ab-13","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-14","pred":"source","obj":"semrep-sample"},{"subj":"E2-ab-14","pred":"source","obj":"semrep-sample"},{"subj":"E3-ab-14","pred":"source","obj":"semrep-sample"},{"subj":"E4-ab-14","pred":"source","obj":"semrep-sample"},{"subj":"E5-ab-14","pred":"source","obj":"semrep-sample"},{"subj":"E6-ab-14","pred":"source","obj":"semrep-sample"},{"subj":"E7-ab-14","pred":"source","obj":"semrep-sample"},{"subj":"E8-ab-14","pred":"source","obj":"semrep-sample"},{"subj":"E9-ab-14","pred":"source","obj":"semrep-sample"},{"subj":"E10-ab-14","pred":"source","obj":"semrep-sample"},{"subj":"E11-ab-14","pred":"source","obj":"semrep-sample"},{"subj":"E12-ab-14","pred":"source","obj":"semrep-sample"},{"subj":"T9","pred":"source","obj":"semrep-sample"},{"subj":"T10","pred":"source","obj":"semrep-sample"},{"subj":"T11","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-15","pred":"source","obj":"semrep-sample"},{"subj":"E2-ab-15","pred":"source","obj":"semrep-sample"},{"subj":"E3-ab-15","pred":"source","obj":"semrep-sample"},{"subj":"E4-ab-15","pred":"source","obj":"semrep-sample"},{"subj":"E5-ab-15","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-16","pred":"source","obj":"semrep-sample"},{"subj":"E2-ab-16","pred":"source","obj":"semrep-sample"},{"subj":"E3-ab-16","pred":"source","obj":"semrep-sample"},{"subj":"E4-ab-16","pred":"source","obj":"semrep-sample"},{"subj":"E5-ab-16","pred":"source","obj":"semrep-sample"},{"subj":"E6-ab-16","pred":"source","obj":"semrep-sample"},{"subj":"E7-ab-16","pred":"source","obj":"semrep-sample"},{"subj":"E8-ab-16","pred":"source","obj":"semrep-sample"},{"subj":"E9-ab-16","pred":"source","obj":"semrep-sample"},{"subj":"E10-ab-16","pred":"source","obj":"semrep-sample"},{"subj":"T12","pred":"source","obj":"semrep-sample"},{"subj":"E1-ab-17","pred":"source","obj":"semrep-sample"},{"subj":"E2-ab-17","pred":"source","obj":"semrep-sample"},{"subj":"E3-ab-17","pred":"source","obj":"semrep-sample"},{"subj":"E4-ab-17","pred":"source","obj":"semrep-sample"},{"subj":"E5-ab-17","pred":"source","obj":"semrep-sample"},{"subj":"E6-ab-17","pred":"source","obj":"semrep-sample"},{"subj":"E7-ab-17","pred":"source","obj":"semrep-sample"},{"subj":"T13","pred":"source","obj":"semrep-sample"}]},{"project":"jnlpba-st-training","denotations":[{"id":"T1","span":{"begin":71,"end":155},"obj":"DNA"},{"id":"T2","span":{"begin":166,"end":175},"obj":"protein"},{"id":"T3","span":{"begin":177,"end":181},"obj":"protein"},{"id":"T4","span":{"begin":205,"end":241},"obj":"protein"},{"id":"T5","span":{"begin":246,"end":273},"obj":"protein"},{"id":"T6","span":{"begin":275,"end":280},"obj":"protein"},{"id":"T7","span":{"begin":324,"end":339},"obj":"cell_type"},{"id":"T8","span":{"begin":344,"end":366},"obj":"cell_type"},{"id":"T9","span":{"begin":434,"end":448},"obj":"protein"},{"id":"T10","span":{"begin":497,"end":521},"obj":"DNA"},{"id":"T11","span":{"begin":558,"end":603},"obj":"protein"},{"id":"T12","span":{"begin":604,"end":608},"obj":"protein"},{"id":"T13","span":{"begin":757,"end":765},"obj":"DNA"},{"id":"T14","span":{"begin":801,"end":810},"obj":"DNA"},{"id":"T15","span":{"begin":839,"end":853},"obj":"DNA"},{"id":"T16","span":{"begin":863,"end":880},"obj":"DNA"},{"id":"T17","span":{"begin":899,"end":904},"obj":"protein"},{"id":"T18","span":{"begin":919,"end":928},"obj":"DNA"},{"id":"T19","span":{"begin":961,"end":976},"obj":"cell_type"},{"id":"T20","span":{"begin":1031,"end":1040},"obj":"DNA"},{"id":"T21","span":{"begin":1069,"end":1085},"obj":"protein"},{"id":"T22","span":{"begin":1091,"end":1106},"obj":"cell_type"},{"id":"T23","span":{"begin":1112,"end":1131},"obj":"protein"},{"id":"T24","span":{"begin":1133,"end":1139},"obj":"protein"},{"id":"T25","span":{"begin":1144,"end":1150},"obj":"protein"},{"id":"T26","span":{"begin":1269,"end":1275},"obj":"protein"},{"id":"T27","span":{"begin":1301,"end":1380},"obj":"protein"},{"id":"T28","span":{"begin":1425,"end":1431},"obj":"protein"},{"id":"T29","span":{"begin":1482,"end":1497},"obj":"cell_type"},{"id":"T30","span":{"begin":1499,"end":1518},"obj":"DNA"},{"id":"T31","span":{"begin":1602,"end":1611},"obj":"cell_type"},{"id":"T32","span":{"begin":1626,"end":1666},"obj":"DNA"},{"id":"T33","span":{"begin":1736,"end":1751},"obj":"cell_type"},{"id":"T34","span":{"begin":1817,"end":1862},"obj":"protein"},{"id":"T35","span":{"begin":1863,"end":1867},"obj":"protein"},{"id":"T36","span":{"begin":1876,"end":1911},"obj":"protein"},{"id":"T37","span":{"begin":1978,"end":1992},"obj":"protein"}],"attributes":[{"subj":"T1","pred":"source","obj":"jnlpba-st-training"},{"subj":"T2","pred":"source","obj":"jnlpba-st-training"},{"subj":"T3","pred":"source","obj":"jnlpba-st-training"},{"subj":"T4","pred":"source","obj":"jnlpba-st-training"},{"subj":"T5","pred":"source","obj":"jnlpba-st-training"},{"subj":"T6","pred":"source","obj":"jnlpba-st-training"},{"subj":"T7","pred":"source","obj":"jnlpba-st-training"},{"subj":"T8","pred":"source","obj":"jnlpba-st-training"},{"subj":"T9","pred":"source","obj":"jnlpba-st-training"},{"subj":"T10","pred":"source","obj":"jnlpba-st-training"},{"subj":"T11","pred":"source","obj":"jnlpba-st-training"},{"subj":"T12","pred":"source","obj":"jnlpba-st-training"},{"subj":"T13","pred":"source","obj":"jnlpba-st-training"},{"subj":"T14","pred":"source","obj":"jnlpba-st-training"},{"subj":"T15","pred":"source","obj":"jnlpba-st-training"},{"subj":"T16","pred":"source","obj":"jnlpba-st-training"},{"subj":"T17","pred":"source","obj":"jnlpba-st-training"},{"subj":"T18","pred":"source","obj":"jnlpba-st-training"},{"subj":"T19","pred":"source","obj":"jnlpba-st-training"},{"subj":"T20","pred":"source","obj":"jnlpba-st-training"},{"subj":"T21","pred":"source","obj":"jnlpba-st-training"},{"subj":"T22","pred":"source","obj":"jnlpba-st-training"},{"subj":"T23","pred":"source","obj":"jnlpba-st-training"},{"subj":"T24","pred":"source","obj":"jnlpba-st-training"},{"subj":"T25","pred":"source","obj":"jnlpba-st-training"},{"subj":"T26","pred":"source","obj":"jnlpba-st-training"},{"subj":"T27","pred":"source","obj":"jnlpba-st-training"},{"subj":"T28","pred":"source","obj":"jnlpba-st-training"},{"subj":"T29","pred":"source","obj":"jnlpba-st-training"},{"subj":"T30","pred":"source","obj":"jnlpba-st-training"},{"subj":"T31","pred":"source","obj":"jnlpba-st-training"},{"subj":"T32","pred":"source","obj":"jnlpba-st-training"},{"subj":"T33","pred":"source","obj":"jnlpba-st-training"},{"subj":"T34","pred":"source","obj":"jnlpba-st-training"},{"subj":"T35","pred":"source","obj":"jnlpba-st-training"},{"subj":"T36","pred":"source","obj":"jnlpba-st-training"},{"subj":"T37","pred":"source","obj":"jnlpba-st-training"}]},{"project":"pubmed-sentences-benchmark","denotations":[{"id":"S1","span":{"begin":0,"end":183},"obj":"Sentence"},{"id":"S2","span":{"begin":184,"end":367},"obj":"Sentence"},{"id":"S3","span":{"begin":368,"end":705},"obj":"Sentence"},{"id":"S4","span":{"begin":706,"end":881},"obj":"Sentence"},{"id":"S5","span":{"begin":882,"end":977},"obj":"Sentence"},{"id":"S6","span":{"begin":978,"end":1107},"obj":"Sentence"},{"id":"S7","span":{"begin":1108,"end":1215},"obj":"Sentence"},{"id":"S8","span":{"begin":1216,"end":1498},"obj":"Sentence"},{"id":"S9","span":{"begin":1499,"end":1612},"obj":"Sentence"},{"id":"S10","span":{"begin":1613,"end":1784},"obj":"Sentence"},{"id":"S11","span":{"begin":1785,"end":1993},"obj":"Sentence"}],"attributes":[{"subj":"S1","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S2","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S3","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S4","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S5","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S6","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S7","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S8","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S9","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S10","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S11","pred":"source","obj":"pubmed-sentences-benchmark"}]},{"project":"GENIAcorpus","denotations":[{"id":"T1","span":{"begin":45,"end":63},"obj":"other_name"},{"id":"T2","span":{"begin":71,"end":98},"obj":"protein_molecule"},{"id":"T3","span":{"begin":100,"end":136},"obj":"protein_molecule"},{"id":"T4","span":{"begin":138,"end":155},"obj":"DNA_domain_or_region"},{"id":"T5","span":{"begin":166,"end":175},"obj":"protein_molecule"},{"id":"T6","span":{"begin":177,"end":181},"obj":"protein_molecule"},{"id":"T7","span":{"begin":205,"end":241},"obj":"protein_molecule"},{"id":"T8","span":{"begin":246,"end":273},"obj":"protein_molecule"},{"id":"T9","span":{"begin":275,"end":280},"obj":"protein_molecule"},{"id":"T10","span":{"begin":324,"end":339},"obj":"cell_type"},{"id":"T11","span":{"begin":344,"end":366},"obj":"cell_type"},{"id":"T12","span":{"begin":398,"end":426},"obj":"other_name"},{"id":"T13","span":{"begin":434,"end":439},"obj":"protein_molecule"},{"id":"T14","span":{"begin":497,"end":521},"obj":"DNA_domain_or_region"},{"id":"T15","span":{"begin":558,"end":603},"obj":"protein_family_or_group"},{"id":"T16","span":{"begin":604,"end":608},"obj":"protein_molecule"},{"id":"T17","span":{"begin":757,"end":765},"obj":"DNA_domain_or_region"},{"id":"T18","span":{"begin":801,"end":810},"obj":"DNA_domain_or_region"},{"id":"T19","span":{"begin":839,"end":853},"obj":"DNA_domain_or_region"},{"id":"T20","span":{"begin":863,"end":867},"obj":"protein_molecule"},{"id":"T21","span":{"begin":899,"end":904},"obj":"protein_molecule"},{"id":"T22","span":{"begin":919,"end":928},"obj":"DNA_domain_or_region"},{"id":"T23","span":{"begin":961,"end":976},"obj":"cell_type"},{"id":"T24","span":{"begin":978,"end":1015},"obj":"other_name"},{"id":"T25","span":{"begin":1031,"end":1040},"obj":"DNA_domain_or_region"},{"id":"T26","span":{"begin":1069,"end":1085},"obj":"protein_family_or_group"},{"id":"T27","span":{"begin":1091,"end":1106},"obj":"cell_type"},{"id":"T28","span":{"begin":1112,"end":1131},"obj":"protein_complex"},{"id":"T29","span":{"begin":1133,"end":1139},"obj":"protein_complex"},{"id":"T30","span":{"begin":1144,"end":1150},"obj":"protein_complex"},{"id":"T31","span":{"begin":1216,"end":1227},"obj":"other_name"},{"id":"T32","span":{"begin":1232,"end":1254},"obj":"other_name"},{"id":"T33","span":{"begin":1269,"end":1275},"obj":"protein_complex"},{"id":"T34","span":{"begin":1301,"end":1362},"obj":"protein_family_or_group"},{"id":"T35","span":{"begin":1362,"end":1371},"obj":"protein_molecule"},{"id":"T36","span":{"begin":1425,"end":1431},"obj":"protein_molecule"},{"id":"T37","span":{"begin":1482,"end":1497},"obj":"cell_type"},{"id":"T38","span":{"begin":1499,"end":1518},"obj":"DNA_molecule"},{"id":"T39","span":{"begin":1602,"end":1611},"obj":"cell_type"},{"id":"T40","span":{"begin":1626,"end":1638},"obj":"DNA_domain_or_region"},{"id":"T41","span":{"begin":1639,"end":1648},"obj":"DNA_domain_or_region"},{"id":"T42","span":{"begin":1694,"end":1732},"obj":"DNA_substructure"},{"id":"T43","span":{"begin":1736,"end":1751},"obj":"cell_type"},{"id":"T44","span":{"begin":1817,"end":1862},"obj":"protein_family_or_group"},{"id":"T45","span":{"begin":1863,"end":1867},"obj":"protein_molecule"},{"id":"T46","span":{"begin":1939,"end":1970},"obj":"other_name"},{"id":"T47","span":{"begin":1978,"end":1983},"obj":"protein_molecule"}],"attributes":[{"subj":"T1","pred":"source","obj":"GENIAcorpus"},{"subj":"T2","pred":"source","obj":"GENIAcorpus"},{"subj":"T3","pred":"source","obj":"GENIAcorpus"},{"subj":"T4","pred":"source","obj":"GENIAcorpus"},{"subj":"T5","pred":"source","obj":"GENIAcorpus"},{"subj":"T6","pred":"source","obj":"GENIAcorpus"},{"subj":"T7","pred":"source","obj":"GENIAcorpus"},{"subj":"T8","pred":"source","obj":"GENIAcorpus"},{"subj":"T9","pred":"source","obj":"GENIAcorpus"},{"subj":"T10","pred":"source","obj":"GENIAcorpus"},{"subj":"T11","pred":"source","obj":"GENIAcorpus"},{"subj":"T12","pred":"source","obj":"GENIAcorpus"},{"subj":"T13","pred":"source","obj":"GENIAcorpus"},{"subj":"T14","pred":"source","obj":"GENIAcorpus"},{"subj":"T15","pred":"source","obj":"GENIAcorpus"},{"subj":"T16","pred":"source","obj":"GENIAcorpus"},{"subj":"T17","pred":"source","obj":"GENIAcorpus"},{"subj":"T18","pred":"source","obj":"GENIAcorpus"},{"subj":"T19","pred":"source","obj":"GENIAcorpus"},{"subj":"T20","pred":"source","obj":"GENIAcorpus"},{"subj":"T21","pred":"source","obj":"GENIAcorpus"},{"subj":"T22","pred":"source","obj":"GENIAcorpus"},{"subj":"T23","pred":"source","obj":"GENIAcorpus"},{"subj":"T24","pred":"source","obj":"GENIAcorpus"},{"subj":"T25","pred":"source","obj":"GENIAcorpus"},{"subj":"T26","pred":"source","obj":"GENIAcorpus"},{"subj":"T27","pred":"source","obj":"GENIAcorpus"},{"subj":"T28","pred":"source","obj":"GENIAcorpus"},{"subj":"T29","pred":"source","obj":"GENIAcorpus"},{"subj":"T30","pred":"source","obj":"GENIAcorpus"},{"subj":"T31","pred":"source","obj":"GENIAcorpus"},{"subj":"T32","pred":"source","obj":"GENIAcorpus"},{"subj":"T33","pred":"source","obj":"GENIAcorpus"},{"subj":"T34","pred":"source","obj":"GENIAcorpus"},{"subj":"T35","pred":"source","obj":"GENIAcorpus"},{"subj":"T36","pred":"source","obj":"GENIAcorpus"},{"subj":"T37","pred":"source","obj":"GENIAcorpus"},{"subj":"T38","pred":"source","obj":"GENIAcorpus"},{"subj":"T39","pred":"source","obj":"GENIAcorpus"},{"subj":"T40","pred":"source","obj":"GENIAcorpus"},{"subj":"T41","pred":"source","obj":"GENIAcorpus"},{"subj":"T42","pred":"source","obj":"GENIAcorpus"},{"subj":"T43","pred":"source","obj":"GENIAcorpus"},{"subj":"T44","pred":"source","obj":"GENIAcorpus"},{"subj":"T45","pred":"source","obj":"GENIAcorpus"},{"subj":"T46","pred":"source","obj":"GENIAcorpus"},{"subj":"T47","pred":"source","obj":"GENIAcorpus"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"genia-medco-coref","color":"#ecb893","default":true},{"id":"semrep-sample","color":"#9e93ec"},{"id":"jnlpba-st-training","color":"#a1ec93"},{"id":"pubmed-sentences-benchmark","color":"#ec93bb"},{"id":"GENIAcorpus","color":"#93d5ec"}]}]}}