PubMed:7929820 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/7929820","sourcedb":"PubMed","sourceid":"7929820","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/7929820","text":"C/EBP beta regulation of the tumor necrosis factor alpha gene.\nActivated macrophages contribute to chronic inflammation by the secretion of cytokines and proteinases. Tumor necrosis factor alpha (TNF alpha) is particularly important in this process because of its ability to regulate other inflammatory mediators in an autocrine and paracrine fashion. The mechanism(s) responsible for the cell type-specific regulation of TNF alpha is not known. We present data to show that the expression of TNF alpha is regulated by the transcription factor C/EBP beta (NF-IL6). C/EBP beta activated the TNF alpha gene promoter in cotransfection assays and bound to it at a site which failed to bind the closely related protein C/EBP alpha. Finally, a dominant-negative version of C/EBP beta blocked TNF alpha promoter activation in myeloid cells. Our results implicate C/EBP beta as an important regulator of TNF alpha by myelomonocytic cells.","tracks":[{"project":"genia-medco-coref","denotations":[{"id":"C1","span":{"begin":25,"end":61},"obj":"NP"},{"id":"C2","span":{"begin":99,"end":165},"obj":"NP"},{"id":"C3","span":{"begin":167,"end":206},"obj":"NP"},{"id":"C4","span":{"begin":236,"end":248},"obj":"NP"},{"id":"C5","span":{"begin":260,"end":263},"obj":"NP"},{"id":"C6","span":{"begin":422,"end":431},"obj":"NP"},{"id":"C7","span":{"begin":493,"end":502},"obj":"NP"},{"id":"C8","span":{"begin":519,"end":563},"obj":"NP"},{"id":"C9","span":{"begin":565,"end":575},"obj":"NP"},{"id":"C10","span":{"begin":586,"end":613},"obj":"NP"},{"id":"C11","span":{"begin":652,"end":654},"obj":"NP"},{"id":"C12","span":{"begin":658,"end":664},"obj":"NP"},{"id":"C13","span":{"begin":665,"end":670},"obj":"NP"},{"id":"C14","span":{"begin":767,"end":777},"obj":"NP"},{"id":"C15","span":{"begin":819,"end":832},"obj":"NP"},{"id":"C16","span":{"begin":856,"end":866},"obj":"NP"},{"id":"C17","span":{"begin":896,"end":905},"obj":"NP"},{"id":"C18","span":{"begin":909,"end":929},"obj":"NP"}],"relations":[{"id":"R1","pred":"coref-ident","subj":"C3","obj":"C1"},{"id":"R2","pred":"coref-ident","subj":"C4","obj":"C2"},{"id":"R3","pred":"coref-pron","subj":"C5","obj":"C3"},{"id":"R4","pred":"coref-ident","subj":"C6","obj":"C3"},{"id":"R5","pred":"coref-ident","subj":"C7","obj":"C6"},{"id":"R6","pred":"coref-ident","subj":"C9","obj":"C8"},{"id":"R7","pred":"coref-pron","subj":"C11","obj":"C10"},{"id":"R8","pred":"coref-relat","subj":"C13","obj":"C12"},{"id":"R9","pred":"coref-ident","subj":"C14","obj":"C9"},{"id":"R10","pred":"coref-ident","subj":"C16","obj":"C14"},{"id":"R11","pred":"coref-ident","subj":"C17","obj":"C7"},{"id":"R12","pred":"coref-ident","subj":"C18","obj":"C15"}],"attributes":[{"subj":"C1","pred":"source","obj":"genia-medco-coref"},{"subj":"C2","pred":"source","obj":"genia-medco-coref"},{"subj":"C3","pred":"source","obj":"genia-medco-coref"},{"subj":"C4","pred":"source","obj":"genia-medco-coref"},{"subj":"C5","pred":"source","obj":"genia-medco-coref"},{"subj":"C6","pred":"source","obj":"genia-medco-coref"},{"subj":"C7","pred":"source","obj":"genia-medco-coref"},{"subj":"C8","pred":"source","obj":"genia-medco-coref"},{"subj":"C9","pred":"source","obj":"genia-medco-coref"},{"subj":"C10","pred":"source","obj":"genia-medco-coref"},{"subj":"C11","pred":"source","obj":"genia-medco-coref"},{"subj":"C12","pred":"source","obj":"genia-medco-coref"},{"subj":"C13","pred":"source","obj":"genia-medco-coref"},{"subj":"C14","pred":"source","obj":"genia-medco-coref"},{"subj":"C15","pred":"source","obj":"genia-medco-coref"},{"subj":"C16","pred":"source","obj":"genia-medco-coref"},{"subj":"C17","pred":"source","obj":"genia-medco-coref"},{"subj":"C18","pred":"source","obj":"genia-medco-coref"}]},{"project":"jnlpba-st-training","denotations":[{"id":"T1","span":{"begin":0,"end":10},"obj":"protein"},{"id":"T2","span":{"begin":29,"end":61},"obj":"DNA"},{"id":"T3","span":{"begin":63,"end":84},"obj":"cell_type"},{"id":"T4","span":{"begin":140,"end":149},"obj":"protein"},{"id":"T5","span":{"begin":154,"end":165},"obj":"protein"},{"id":"T6","span":{"begin":167,"end":194},"obj":"protein"},{"id":"T7","span":{"begin":196,"end":205},"obj":"protein"},{"id":"T8","span":{"begin":422,"end":431},"obj":"protein"},{"id":"T9","span":{"begin":493,"end":502},"obj":"protein"},{"id":"T10","span":{"begin":523,"end":543},"obj":"protein"},{"id":"T11","span":{"begin":544,"end":554},"obj":"protein"},{"id":"T12","span":{"begin":556,"end":562},"obj":"protein"},{"id":"T13","span":{"begin":565,"end":575},"obj":"protein"},{"id":"T14","span":{"begin":590,"end":613},"obj":"DNA"},{"id":"T15","span":{"begin":714,"end":725},"obj":"protein"},{"id":"T16","span":{"begin":767,"end":777},"obj":"protein"},{"id":"T17","span":{"begin":786,"end":804},"obj":"DNA"},{"id":"T18","span":{"begin":819,"end":832},"obj":"cell_type"},{"id":"T19","span":{"begin":856,"end":866},"obj":"protein"},{"id":"T20","span":{"begin":896,"end":905},"obj":"protein"},{"id":"T21","span":{"begin":909,"end":929},"obj":"cell_type"}],"attributes":[{"subj":"T1","pred":"source","obj":"jnlpba-st-training"},{"subj":"T2","pred":"source","obj":"jnlpba-st-training"},{"subj":"T3","pred":"source","obj":"jnlpba-st-training"},{"subj":"T4","pred":"source","obj":"jnlpba-st-training"},{"subj":"T5","pred":"source","obj":"jnlpba-st-training"},{"subj":"T6","pred":"source","obj":"jnlpba-st-training"},{"subj":"T7","pred":"source","obj":"jnlpba-st-training"},{"subj":"T8","pred":"source","obj":"jnlpba-st-training"},{"subj":"T9","pred":"source","obj":"jnlpba-st-training"},{"subj":"T10","pred":"source","obj":"jnlpba-st-training"},{"subj":"T11","pred":"source","obj":"jnlpba-st-training"},{"subj":"T12","pred":"source","obj":"jnlpba-st-training"},{"subj":"T13","pred":"source","obj":"jnlpba-st-training"},{"subj":"T14","pred":"source","obj":"jnlpba-st-training"},{"subj":"T15","pred":"source","obj":"jnlpba-st-training"},{"subj":"T16","pred":"source","obj":"jnlpba-st-training"},{"subj":"T17","pred":"source","obj":"jnlpba-st-training"},{"subj":"T18","pred":"source","obj":"jnlpba-st-training"},{"subj":"T19","pred":"source","obj":"jnlpba-st-training"},{"subj":"T20","pred":"source","obj":"jnlpba-st-training"},{"subj":"T21","pred":"source","obj":"jnlpba-st-training"}]},{"project":"pubmed-sentences-benchmark","denotations":[{"id":"S1","span":{"begin":0,"end":62},"obj":"Sentence"},{"id":"S2","span":{"begin":63,"end":166},"obj":"Sentence"},{"id":"S3","span":{"begin":167,"end":351},"obj":"Sentence"},{"id":"S4","span":{"begin":352,"end":445},"obj":"Sentence"},{"id":"S5","span":{"begin":446,"end":564},"obj":"Sentence"},{"id":"S6","span":{"begin":565,"end":726},"obj":"Sentence"},{"id":"S7","span":{"begin":727,"end":833},"obj":"Sentence"},{"id":"S8","span":{"begin":834,"end":930},"obj":"Sentence"}],"attributes":[{"subj":"S1","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S2","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S3","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S4","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S5","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S6","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S7","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S8","pred":"source","obj":"pubmed-sentences-benchmark"}]},{"project":"GENIAcorpus","denotations":[{"id":"T1","span":{"begin":0,"end":10},"obj":"protein_molecule"},{"id":"T2","span":{"begin":29,"end":56},"obj":"protein_molecule"},{"id":"T3","span":{"begin":63,"end":84},"obj":"cell_type"},{"id":"T4","span":{"begin":99,"end":119},"obj":"other_name"},{"id":"T5","span":{"begin":140,"end":149},"obj":"protein_family_or_group"},{"id":"T6","span":{"begin":154,"end":165},"obj":"protein_family_or_group"},{"id":"T7","span":{"begin":167,"end":194},"obj":"protein_molecule"},{"id":"T8","span":{"begin":196,"end":205},"obj":"protein_molecule"},{"id":"T9","span":{"begin":290,"end":312},"obj":"other_name"},{"id":"T10","span":{"begin":389,"end":418},"obj":"other_name"},{"id":"T11","span":{"begin":422,"end":431},"obj":"protein_molecule"},{"id":"T12","span":{"begin":493,"end":502},"obj":"protein_molecule"},{"id":"T13","span":{"begin":523,"end":543},"obj":"protein_family_or_group"},{"id":"T14","span":{"begin":544,"end":554},"obj":"protein_molecule"},{"id":"T15","span":{"begin":556,"end":562},"obj":"protein_molecule"},{"id":"T16","span":{"begin":565,"end":575},"obj":"protein_molecule"},{"id":"T17","span":{"begin":590,"end":599},"obj":"protein_molecule"},{"id":"T18","span":{"begin":617,"end":638},"obj":"other_name"},{"id":"T19","span":{"begin":714,"end":725},"obj":"protein_molecule"},{"id":"T20","span":{"begin":767,"end":777},"obj":"protein_molecule"},{"id":"T21","span":{"begin":786,"end":795},"obj":"protein_molecule"},{"id":"T22","span":{"begin":819,"end":832},"obj":"cell_type"},{"id":"T23","span":{"begin":856,"end":866},"obj":"protein_molecule"},{"id":"T24","span":{"begin":896,"end":905},"obj":"protein_molecule"},{"id":"T25","span":{"begin":909,"end":929},"obj":"cell_type"}],"attributes":[{"subj":"T1","pred":"source","obj":"GENIAcorpus"},{"subj":"T2","pred":"source","obj":"GENIAcorpus"},{"subj":"T3","pred":"source","obj":"GENIAcorpus"},{"subj":"T4","pred":"source","obj":"GENIAcorpus"},{"subj":"T5","pred":"source","obj":"GENIAcorpus"},{"subj":"T6","pred":"source","obj":"GENIAcorpus"},{"subj":"T7","pred":"source","obj":"GENIAcorpus"},{"subj":"T8","pred":"source","obj":"GENIAcorpus"},{"subj":"T9","pred":"source","obj":"GENIAcorpus"},{"subj":"T10","pred":"source","obj":"GENIAcorpus"},{"subj":"T11","pred":"source","obj":"GENIAcorpus"},{"subj":"T12","pred":"source","obj":"GENIAcorpus"},{"subj":"T13","pred":"source","obj":"GENIAcorpus"},{"subj":"T14","pred":"source","obj":"GENIAcorpus"},{"subj":"T15","pred":"source","obj":"GENIAcorpus"},{"subj":"T16","pred":"source","obj":"GENIAcorpus"},{"subj":"T17","pred":"source","obj":"GENIAcorpus"},{"subj":"T18","pred":"source","obj":"GENIAcorpus"},{"subj":"T19","pred":"source","obj":"GENIAcorpus"},{"subj":"T20","pred":"source","obj":"GENIAcorpus"},{"subj":"T21","pred":"source","obj":"GENIAcorpus"},{"subj":"T22","pred":"source","obj":"GENIAcorpus"},{"subj":"T23","pred":"source","obj":"GENIAcorpus"},{"subj":"T24","pred":"source","obj":"GENIAcorpus"},{"subj":"T25","pred":"source","obj":"GENIAcorpus"}]},{"project":"Inflammaging","denotations":[{"id":"T1","span":{"begin":0,"end":62},"obj":"Sentence"},{"id":"T2","span":{"begin":63,"end":166},"obj":"Sentence"},{"id":"T3","span":{"begin":167,"end":351},"obj":"Sentence"},{"id":"T4","span":{"begin":352,"end":445},"obj":"Sentence"},{"id":"T5","span":{"begin":446,"end":564},"obj":"Sentence"},{"id":"T6","span":{"begin":565,"end":726},"obj":"Sentence"},{"id":"T7","span":{"begin":727,"end":833},"obj":"Sentence"},{"id":"T8","span":{"begin":834,"end":930},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":62},"obj":"Sentence"},{"id":"T2","span":{"begin":63,"end":166},"obj":"Sentence"},{"id":"T3","span":{"begin":167,"end":351},"obj":"Sentence"},{"id":"T4","span":{"begin":352,"end":445},"obj":"Sentence"},{"id":"T5","span":{"begin":446,"end":564},"obj":"Sentence"},{"id":"T6","span":{"begin":565,"end":726},"obj":"Sentence"},{"id":"T7","span":{"begin":727,"end":833},"obj":"Sentence"},{"id":"T8","span":{"begin":834,"end":930},"obj":"Sentence"}],"attributes":[{"subj":"T1","pred":"source","obj":"Inflammaging"},{"subj":"T2","pred":"source","obj":"Inflammaging"},{"subj":"T3","pred":"source","obj":"Inflammaging"},{"subj":"T4","pred":"source","obj":"Inflammaging"},{"subj":"T5","pred":"source","obj":"Inflammaging"},{"subj":"T6","pred":"source","obj":"Inflammaging"},{"subj":"T7","pred":"source","obj":"Inflammaging"},{"subj":"T8","pred":"source","obj":"Inflammaging"},{"subj":"T1","pred":"source","obj":"Inflammaging"},{"subj":"T2","pred":"source","obj":"Inflammaging"},{"subj":"T3","pred":"source","obj":"Inflammaging"},{"subj":"T4","pred":"source","obj":"Inflammaging"},{"subj":"T5","pred":"source","obj":"Inflammaging"},{"subj":"T6","pred":"source","obj":"Inflammaging"},{"subj":"T7","pred":"source","obj":"Inflammaging"},{"subj":"T8","pred":"source","obj":"Inflammaging"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"genia-medco-coref","color":"#93daec","default":true},{"id":"jnlpba-st-training","color":"#ece493"},{"id":"pubmed-sentences-benchmark","color":"#c993ec"},{"id":"GENIAcorpus","color":"#93ecaf"},{"id":"Inflammaging","color":"#ec9593"}]}]}}