PubMed:7859743
Annnotations
DisGeNET
{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":1277,"end":1280},"obj":"gene:6898"},{"id":"T1","span":{"begin":1327,"end":1330},"obj":"disease:C0019693"},{"id":"T2","span":{"begin":1277,"end":1280},"obj":"gene:79969"},{"id":"T3","span":{"begin":1327,"end":1330},"obj":"disease:C0019693"},{"id":"T4","span":{"begin":1290,"end":1297},"obj":"gene:6898"},{"id":"T5","span":{"begin":1327,"end":1330},"obj":"disease:C0019693"},{"id":"T6","span":{"begin":1290,"end":1297},"obj":"gene:79969"},{"id":"T7","span":{"begin":1327,"end":1330},"obj":"disease:C0019693"},{"id":"T8","span":{"begin":1383,"end":1386},"obj":"gene:6647"},{"id":"T9","span":{"begin":1327,"end":1330},"obj":"disease:C0019693"},{"id":"T10","span":{"begin":1427,"end":1430},"obj":"gene:7124"},{"id":"T11","span":{"begin":1327,"end":1330},"obj":"disease:C0019693"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"},{"id":"R2","pred":"associated_with","subj":"T2","obj":"T3"},{"id":"R3","pred":"associated_with","subj":"T4","obj":"T5"},{"id":"R4","pred":"associated_with","subj":"T6","obj":"T7"},{"id":"R5","pred":"associated_with","subj":"T8","obj":"T9"},{"id":"R6","pred":"associated_with","subj":"T10","obj":"T11"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"text":"HIV-1 Tat potentiates TNF-induced NF-kappa B activation and cytotoxicity by altering the cellular redox state.\nThis study demonstrates that human immunodeficiency virus type 1 (HIV-1) Tat protein amplifies the activity of tumor necrosis factor (TNF), a cytokine that stimulates HIV-1 replication through activation of NF-kappa B. In HeLa cells stably transfected with the HIV-1 tat gene (HeLa-tat cells), expression of the Tat protein enhanced both TNF-induced activation of NF-kappa B and TNF-mediated cytotoxicity. A similar potentiation of TNF effects was observed in Jurkat T cells and HeLa cells treated with soluble Tat protein. TNF-mediated activation of NF-kappa B and cytotoxicity involves the intracellular formation of reactive oxygen intermediates. Therefore, Tat-mediated effects on the cellular redox state were analyzed. In both T cells and HeLa cells HIV-1 Tat suppressed the expression of Mn-dependent superoxide dismutase (Mn-SOD), a mitochondrial enzyme that is part of the cellular defense system against oxidative stress. Thus, Mn-SOD RNA protein levels and activity were markedly reduced in the presence of Tat. Decreased Mn-SOD expression was associated with decreased levels of glutathione and a lower ratio of reduced:oxidized glutathione. A truncated Tat protein (Tat1-72), known to transactivate the HIV-1 long terminal repeat (LTR), no longer affected Mn-SOD expression, the cellular redox state or TNF-mediated cytotoxicity. Thus, our experiments demonstrate that the C-terminal region of HIV-1 Tat is required to suppress Mn-SOD expression and to induce pro-oxidative conditions reflected by a drop in reduced glutathione (GSH) and the GSH:oxidized GSH (GSSG) ratio.(ABSTRACT TRUNCATED AT 250 WORDS)"}
jnlpba-st-training
{"project":"jnlpba-st-training","denotations":[{"id":"T1","span":{"begin":0,"end":9},"obj":"protein"},{"id":"T2","span":{"begin":22,"end":25},"obj":"protein"},{"id":"T3","span":{"begin":34,"end":44},"obj":"protein"},{"id":"T4","span":{"begin":140,"end":195},"obj":"protein"},{"id":"T5","span":{"begin":222,"end":243},"obj":"protein"},{"id":"T6","span":{"begin":245,"end":248},"obj":"protein"},{"id":"T7","span":{"begin":318,"end":328},"obj":"protein"},{"id":"T8","span":{"begin":333,"end":343},"obj":"cell_line"},{"id":"T9","span":{"begin":372,"end":386},"obj":"DNA"},{"id":"T10","span":{"begin":388,"end":402},"obj":"cell_line"},{"id":"T11","span":{"begin":423,"end":434},"obj":"protein"},{"id":"T12","span":{"begin":449,"end":452},"obj":"protein"},{"id":"T13","span":{"begin":475,"end":485},"obj":"protein"},{"id":"T14","span":{"begin":490,"end":493},"obj":"protein"},{"id":"T15","span":{"begin":543,"end":546},"obj":"protein"},{"id":"T16","span":{"begin":590,"end":600},"obj":"cell_line"},{"id":"T17","span":{"begin":622,"end":633},"obj":"protein"},{"id":"T18","span":{"begin":635,"end":638},"obj":"protein"},{"id":"T19","span":{"begin":662,"end":672},"obj":"protein"},{"id":"T20","span":{"begin":772,"end":775},"obj":"protein"},{"id":"T21","span":{"begin":844,"end":851},"obj":"cell_type"},{"id":"T22","span":{"begin":856,"end":866},"obj":"cell_line"},{"id":"T23","span":{"begin":867,"end":876},"obj":"protein"},{"id":"T24","span":{"begin":906,"end":939},"obj":"protein"},{"id":"T25","span":{"begin":941,"end":947},"obj":"protein"},{"id":"T26","span":{"begin":952,"end":972},"obj":"protein"},{"id":"T27","span":{"begin":1049,"end":1055},"obj":"protein"},{"id":"T28","span":{"begin":1129,"end":1132},"obj":"protein"},{"id":"T29","span":{"begin":1144,"end":1150},"obj":"protein"},{"id":"T30","span":{"begin":1277,"end":1288},"obj":"protein"},{"id":"T31","span":{"begin":1290,"end":1297},"obj":"protein"},{"id":"T32","span":{"begin":1327,"end":1353},"obj":"DNA"},{"id":"T33","span":{"begin":1355,"end":1358},"obj":"DNA"},{"id":"T34","span":{"begin":1380,"end":1386},"obj":"protein"},{"id":"T35","span":{"begin":1427,"end":1430},"obj":"protein"},{"id":"T36","span":{"begin":1497,"end":1514},"obj":"protein"},{"id":"T37","span":{"begin":1518,"end":1527},"obj":"protein"},{"id":"T38","span":{"begin":1552,"end":1558},"obj":"protein"},{"id":"T39","span":{"begin":1653,"end":1656},"obj":"protein"}],"text":"HIV-1 Tat potentiates TNF-induced NF-kappa B activation and cytotoxicity by altering the cellular redox state.\nThis study demonstrates that human immunodeficiency virus type 1 (HIV-1) Tat protein amplifies the activity of tumor necrosis factor (TNF), a cytokine that stimulates HIV-1 replication through activation of NF-kappa B. In HeLa cells stably transfected with the HIV-1 tat gene (HeLa-tat cells), expression of the Tat protein enhanced both TNF-induced activation of NF-kappa B and TNF-mediated cytotoxicity. A similar potentiation of TNF effects was observed in Jurkat T cells and HeLa cells treated with soluble Tat protein. TNF-mediated activation of NF-kappa B and cytotoxicity involves the intracellular formation of reactive oxygen intermediates. Therefore, Tat-mediated effects on the cellular redox state were analyzed. In both T cells and HeLa cells HIV-1 Tat suppressed the expression of Mn-dependent superoxide dismutase (Mn-SOD), a mitochondrial enzyme that is part of the cellular defense system against oxidative stress. Thus, Mn-SOD RNA protein levels and activity were markedly reduced in the presence of Tat. Decreased Mn-SOD expression was associated with decreased levels of glutathione and a lower ratio of reduced:oxidized glutathione. A truncated Tat protein (Tat1-72), known to transactivate the HIV-1 long terminal repeat (LTR), no longer affected Mn-SOD expression, the cellular redox state or TNF-mediated cytotoxicity. Thus, our experiments demonstrate that the C-terminal region of HIV-1 Tat is required to suppress Mn-SOD expression and to induce pro-oxidative conditions reflected by a drop in reduced glutathione (GSH) and the GSH:oxidized GSH (GSSG) ratio.(ABSTRACT TRUNCATED AT 250 WORDS)"}
DisGeNET5_gene_disease
{"project":"DisGeNET5_gene_disease","denotations":[{"id":"7859743-1#73#76#gene6898","span":{"begin":184,"end":187},"obj":"gene6898"},{"id":"7859743-1#111#132#gene7124","span":{"begin":222,"end":243},"obj":"gene7124"},{"id":"7859743-1#134#137#gene7124","span":{"begin":245,"end":248},"obj":"gene7124"},{"id":"7859743-1#29#57#diseaseC3854222","span":{"begin":140,"end":168},"obj":"diseaseC3854222"}],"relations":[{"id":"73#76#gene689829#57#diseaseC3854222","pred":"associated_with","subj":"7859743-1#73#76#gene6898","obj":"7859743-1#29#57#diseaseC3854222"},{"id":"111#132#gene712429#57#diseaseC3854222","pred":"associated_with","subj":"7859743-1#111#132#gene7124","obj":"7859743-1#29#57#diseaseC3854222"},{"id":"134#137#gene712429#57#diseaseC3854222","pred":"associated_with","subj":"7859743-1#134#137#gene7124","obj":"7859743-1#29#57#diseaseC3854222"}],"text":"HIV-1 Tat potentiates TNF-induced NF-kappa B activation and cytotoxicity by altering the cellular redox state.\nThis study demonstrates that human immunodeficiency virus type 1 (HIV-1) Tat protein amplifies the activity of tumor necrosis factor (TNF), a cytokine that stimulates HIV-1 replication through activation of NF-kappa B. In HeLa cells stably transfected with the HIV-1 tat gene (HeLa-tat cells), expression of the Tat protein enhanced both TNF-induced activation of NF-kappa B and TNF-mediated cytotoxicity. A similar potentiation of TNF effects was observed in Jurkat T cells and HeLa cells treated with soluble Tat protein. TNF-mediated activation of NF-kappa B and cytotoxicity involves the intracellular formation of reactive oxygen intermediates. Therefore, Tat-mediated effects on the cellular redox state were analyzed. In both T cells and HeLa cells HIV-1 Tat suppressed the expression of Mn-dependent superoxide dismutase (Mn-SOD), a mitochondrial enzyme that is part of the cellular defense system against oxidative stress. Thus, Mn-SOD RNA protein levels and activity were markedly reduced in the presence of Tat. Decreased Mn-SOD expression was associated with decreased levels of glutathione and a lower ratio of reduced:oxidized glutathione. A truncated Tat protein (Tat1-72), known to transactivate the HIV-1 long terminal repeat (LTR), no longer affected Mn-SOD expression, the cellular redox state or TNF-mediated cytotoxicity. Thus, our experiments demonstrate that the C-terminal region of HIV-1 Tat is required to suppress Mn-SOD expression and to induce pro-oxidative conditions reflected by a drop in reduced glutathione (GSH) and the GSH:oxidized GSH (GSSG) ratio.(ABSTRACT TRUNCATED AT 250 WORDS)"}
semrep-sample
{"project":"semrep-sample","denotations":[{"id":"E1-ti-1","span":{"begin":0,"end":5},"obj":"cui:C0019704"},{"id":"E2-ti-1","span":{"begin":6,"end":9},"obj":"cui:C0017375"},{"id":"E3-ti-1","span":{"begin":26,"end":33},"obj":"cui:C0205263"},{"id":"E4-ti-1","span":{"begin":34,"end":44},"obj":"cui:C0079904"},{"id":"E5-ti-1","span":{"begin":22,"end":55},"obj":"cui:C1519684"},{"id":"E6-ti-1","span":{"begin":60,"end":72},"obj":"cui:C0596402"},{"id":"E7-ti-1","span":{"begin":76,"end":84},"obj":"cui:C0205349"},{"id":"E8-ti-1","span":{"begin":89,"end":97},"obj":"cui:C0178539"},{"id":"E9-ti-1","span":{"begin":98,"end":109},"obj":"cui:C0030012"},{"id":"T1","span":{"begin":0,"end":9},"obj":"PART_OF"},{"id":"T2","span":{"begin":10,"end":21},"obj":"AUGMENTS"},{"id":"T3","span":{"begin":10,"end":21},"obj":"AUGMENTS"},{"id":"E1-ab-1","span":{"begin":116,"end":121},"obj":"cui:C0008972"},{"id":"E2-ab-1","span":{"begin":140,"end":175},"obj":"cui:C0019704"},{"id":"E3-ab-1","span":{"begin":184,"end":195},"obj":"cui:C0039341"},{"id":"E4-ab-1","span":{"begin":210,"end":218},"obj":"cui:C0439167"},{"id":"E5-ab-1","span":{"begin":222,"end":243},"obj":"cui:C1456820"},{"id":"E6-ab-1","span":{"begin":253,"end":261},"obj":"cui:C0079189"},{"id":"E7-ab-1","span":{"begin":278,"end":283},"obj":"cui:C0019704"},{"id":"E8-ab-1","span":{"begin":318,"end":328},"obj":"cui:C0079904"},{"id":"T4","span":{"begin":140,"end":195},"obj":"PART_OF"},{"id":"T5","span":{"begin":304,"end":314},"obj":"STIMULATES"},{"id":"E1-ab-2","span":{"begin":333,"end":343},"obj":"cui:C0018873"},{"id":"E2-ab-2","span":{"begin":372,"end":377},"obj":"cui:C0019704"},{"id":"E3-ab-2","span":{"begin":378,"end":386},"obj":"cui:C0017375"},{"id":"E4-ab-2","span":{"begin":393,"end":396},"obj":"cui:C0017375"},{"id":"E5-ab-2","span":{"begin":388,"end":402},"obj":"cui:C0018873"},{"id":"E6-ab-2","span":{"begin":405,"end":415},"obj":"cui:C0185117"},{"id":"E7-ab-2","span":{"begin":423,"end":434},"obj":"cui:C0039341"},{"id":"E8-ab-2","span":{"begin":453,"end":460},"obj":"cui:C0205263"},{"id":"E9-ab-2","span":{"begin":449,"end":471},"obj":"cui:C1519684"},{"id":"E10-ab-2","span":{"begin":475,"end":485},"obj":"cui:C0079904"},{"id":"E11-ab-2","span":{"begin":490,"end":493},"obj":"cui:C1456820"},{"id":"E12-ab-2","span":{"begin":494,"end":502},"obj":"cui:C0086597"},{"id":"E13-ab-2","span":{"begin":503,"end":515},"obj":"cui:C0596402"},{"id":"T6","span":{"begin":372,"end":386},"obj":"PART_OF"},{"id":"T7","span":{"begin":363,"end":367},"obj":"PART_OF"},{"id":"T8","span":{"begin":435,"end":443},"obj":"AUGMENTS"},{"id":"E1-ab-3","span":{"begin":519,"end":526},"obj":"cui:C0871364"},{"id":"E2-ab-3","span":{"begin":527,"end":539},"obj":"cui:C0279023"},{"id":"E3-ab-3","span":{"begin":543,"end":546},"obj":"cui:C1456820"},{"id":"E4-ab-3","span":{"begin":547,"end":554},"obj":"cui:C1280500"},{"id":"E5-ab-3","span":{"begin":571,"end":585},"obj":"cui:C0376448"},{"id":"E6-ab-3","span":{"begin":590,"end":600},"obj":"cui:C0018873"},{"id":"E7-ab-3","span":{"begin":622,"end":633},"obj":"cui:C0039341"},{"id":"T9","span":{"begin":609,"end":613},"obj":"PART_OF"},{"id":"E1-ab-4","span":{"begin":639,"end":647},"obj":"cui:C0086597"},{"id":"E2-ab-4","span":{"begin":635,"end":658},"obj":"cui:C1519684"},{"id":"E3-ab-4","span":{"begin":662,"end":672},"obj":"cui:C0079904"},{"id":"E4-ab-4","span":{"begin":677,"end":689},"obj":"cui:C0596402"},{"id":"E5-ab-4","span":{"begin":703,"end":716},"obj":"cui:C0178719"},{"id":"E6-ab-4","span":{"begin":717,"end":726},"obj":"cui:C1522492"},{"id":"E7-ab-4","span":{"begin":730,"end":759},"obj":"cui:C0920643"},{"id":"T10","span":{"begin":690,"end":698},"obj":"ASSOCIATED_WITH"},{"id":"E1-ab-5","span":{"begin":772,"end":775},"obj":"cui:C0017375"},{"id":"E2-ab-5","span":{"begin":776,"end":784},"obj":"cui:C0086597"},{"id":"E3-ab-5","span":{"begin":785,"end":792},"obj":"cui:C1280500"},{"id":"E4-ab-5","span":{"begin":800,"end":808},"obj":"cui:C0178539"},{"id":"E5-ab-5","span":{"begin":809,"end":820},"obj":"cui:C0030012"},{"id":"E1-ab-6","span":{"begin":844,"end":851},"obj":"cui:C0039194"},{"id":"E2-ab-6","span":{"begin":856,"end":866},"obj":"cui:C0018873"},{"id":"E3-ab-6","span":{"begin":867,"end":872},"obj":"cui:C0019704"},{"id":"E4-ab-6","span":{"begin":873,"end":876},"obj":"cui:C0017375"},{"id":"E5-ab-6","span":{"begin":892,"end":902},"obj":"cui:C0185117"},{"id":"E6-ab-6","span":{"begin":906,"end":939},"obj":"cui:C0024708"},{"id":"E7-ab-6","span":{"begin":952,"end":965},"obj":"cui:C0521451"},{"id":"E8-ab-6","span":{"begin":966,"end":972},"obj":"cui:C0014442"},{"id":"E9-ab-6","span":{"begin":981,"end":985},"obj":"cui:C0449719"},{"id":"E10-ab-6","span":{"begin":993,"end":1001},"obj":"cui:C0178539"},{"id":"E11-ab-6","span":{"begin":1002,"end":1009},"obj":"cui:C0679190"},{"id":"E12-ab-6","span":{"begin":1010,"end":1016},"obj":"cui:C0449913"},{"id":"E13-ab-6","span":{"begin":1025,"end":1041},"obj":"cui:C0242606"},{"id":"T11","span":{"begin":867,"end":876},"obj":"PART_OF"},{"id":"T12","span":{"begin":877,"end":887},"obj":"INHIBITS"},{"id":"E1-ab-7","span":{"begin":1049,"end":1055},"obj":"cui:C0024708"},{"id":"E2-ab-7","span":{"begin":1056,"end":1059},"obj":"cui:C0035668"},{"id":"E3-ab-7","span":{"begin":1060,"end":1067},"obj":"cui:C0033684"},{"id":"E4-ab-7","span":{"begin":1068,"end":1074},"obj":"cui:C0441889"},{"id":"E5-ab-7","span":{"begin":1079,"end":1087},"obj":"cui:C0439167"},{"id":"E6-ab-7","span":{"begin":1093,"end":1101},"obj":"cui:C0522501"},{"id":"E7-ab-7","span":{"begin":1129,"end":1132},"obj":"cui:C0017375"},{"id":"T13","span":{"begin":1117,"end":1125},"obj":"COEXISTS_WITH"},{"id":"E1-ab-8","span":{"begin":1134,"end":1143},"obj":"cui:C0205216"},{"id":"E2-ab-8","span":{"begin":1144,"end":1150},"obj":"cui:C0024708"},{"id":"E3-ab-8","span":{"begin":1151,"end":1161},"obj":"cui:C0185117"},{"id":"E4-ab-8","span":{"begin":1182,"end":1191},"obj":"cui:C0205216"},{"id":"E5-ab-8","span":{"begin":1192,"end":1198},"obj":"cui:C0441889"},{"id":"E6-ab-8","span":{"begin":1202,"end":1213},"obj":"cui:C0017817"},{"id":"E7-ab-8","span":{"begin":1220,"end":1225},"obj":"cui:C0441994"},{"id":"E8-ab-8","span":{"begin":1226,"end":1231},"obj":"cui:C0456603"},{"id":"E9-ab-8","span":{"begin":1235,"end":1242},"obj":"cui:C0392756"},{"id":"E10-ab-8","span":{"begin":1243,"end":1263},"obj":"cui:C0061516"},{"id":"T14","span":{"begin":1182,"end":1191},"obj":"INHIBITS"},{"id":"E1-ab-9","span":{"begin":1277,"end":1288},"obj":"cui:C0039341"},{"id":"E2-ab-9","span":{"begin":1290,"end":1294},"obj":"entrez:116369,117247"},{"id":"E3-ab-9","span":{"begin":1327,"end":1332},"obj":"cui:C0441729"},{"id":"E4-ab-9","span":{"begin":1327,"end":1353},"obj":"cui:C0079517"},{"id":"E5-ab-9","span":{"begin":1364,"end":1370},"obj":"cui:C0205166"},{"id":"E6-ab-9","span":{"begin":1371,"end":1379},"obj":"cui:C0392760"},{"id":"E7-ab-9","span":{"begin":1380,"end":1386},"obj":"cui:C0024708"},{"id":"E8-ab-9","span":{"begin":1387,"end":1397},"obj":"cui:C0185117"},{"id":"E9-ab-9","span":{"begin":1403,"end":1411},"obj":"cui:C0178539"},{"id":"E10-ab-9","span":{"begin":1412,"end":1423},"obj":"cui:C0030012"},{"id":"E11-ab-9","span":{"begin":1427,"end":1430},"obj":"cui:C1456820"},{"id":"E12-ab-9","span":{"begin":1431,"end":1439},"obj":"cui:C0086597"},{"id":"E13-ab-9","span":{"begin":1440,"end":1452},"obj":"cui:C0596402"},{"id":"E1-ab-10","span":{"begin":1464,"end":1475},"obj":"cui:C0681814"},{"id":"E2-ab-10","span":{"begin":1499,"end":1507},"obj":"cui:C0205088"},{"id":"E3-ab-10","span":{"begin":1508,"end":1514},"obj":"cui:C0205147"},{"id":"E4-ab-10","span":{"begin":1518,"end":1523},"obj":"cui:C0019704"},{"id":"E5-ab-10","span":{"begin":1524,"end":1527},"obj":"cui:C0017375"},{"id":"E6-ab-10","span":{"begin":1552,"end":1558},"obj":"cui:C0024708"},{"id":"E7-ab-10","span":{"begin":1559,"end":1569},"obj":"cui:C0185117"},{"id":"E8-ab-10","span":{"begin":1588,"end":1597},"obj":"cui:C0311404"},{"id":"E9-ab-10","span":{"begin":1598,"end":1608},"obj":"cui:C0348080"},{"id":"E10-ab-10","span":{"begin":1632,"end":1651},"obj":"cui:C0034917"},{"id":"E11-ab-10","span":{"begin":1684,"end":1688},"obj":"cui:C0061516"},{"id":"E12-ab-10","span":{"begin":1690,"end":1695},"obj":"cui:C0456603"},{"id":"T15","span":{"begin":1518,"end":1527},"obj":"PART_OF"},{"id":"T16","span":{"begin":1543,"end":1551},"obj":"INHIBITS"}],"relations":[{"id":"R1","pred":"subjectOf","subj":"E2-ti-1","obj":"T1"},{"id":"R2","pred":"objectOf","subj":"E1-ti-1","obj":"T1"},{"id":"R3","pred":"subjectOf","subj":"E2-ti-1","obj":"T2"},{"id":"R4","pred":"objectOf","subj":"E5-ti-1","obj":"T2"},{"id":"R5","pred":"subjectOf","subj":"E2-ti-1","obj":"T3"},{"id":"R6","pred":"objectOf","subj":"E6-ti-1","obj":"T3"},{"id":"R7","pred":"subjectOf","subj":"E3-ab-1","obj":"T4"},{"id":"R8","pred":"objectOf","subj":"E2-ab-1","obj":"T4"},{"id":"R9","pred":"subjectOf","subj":"E6-ab-1","obj":"T5"},{"id":"R10","pred":"objectOf","subj":"E8-ab-1","obj":"T5"},{"id":"R11","pred":"subjectOf","subj":"E3-ab-2","obj":"T6"},{"id":"R12","pred":"objectOf","subj":"E2-ab-2","obj":"T6"},{"id":"R13","pred":"subjectOf","subj":"E3-ab-2","obj":"T7"},{"id":"R14","pred":"objectOf","subj":"E1-ab-2","obj":"T7"},{"id":"R15","pred":"subjectOf","subj":"E7-ab-2","obj":"T8"},{"id":"R16","pred":"objectOf","subj":"E9-ab-2","obj":"T8"},{"id":"R17","pred":"subjectOf","subj":"E7-ab-3","obj":"T9"},{"id":"R18","pred":"objectOf","subj":"E6-ab-3","obj":"T9"},{"id":"R19","pred":"subjectOf","subj":"E7-ab-4","obj":"T10"},{"id":"R20","pred":"objectOf","subj":"E4-ab-4","obj":"T10"},{"id":"R21","pred":"subjectOf","subj":"E4-ab-6","obj":"T11"},{"id":"R22","pred":"objectOf","subj":"E3-ab-6","obj":"T11"},{"id":"R23","pred":"subjectOf","subj":"E4-ab-6","obj":"T12"},{"id":"R24","pred":"objectOf","subj":"E6-ab-6","obj":"T12"},{"id":"R25","pred":"subjectOf","subj":"E2-ab-7","obj":"T13"},{"id":"R26","pred":"objectOf","subj":"E7-ab-7","obj":"T13"},{"id":"R27","pred":"subjectOf","subj":"E2-ab-8","obj":"T14"},{"id":"R28","pred":"objectOf","subj":"E6-ab-8","obj":"T14"},{"id":"R29","pred":"subjectOf","subj":"E5-ab-10","obj":"T15"},{"id":"R30","pred":"objectOf","subj":"E4-ab-10","obj":"T15"},{"id":"R31","pred":"subjectOf","subj":"E5-ab-10","obj":"T16"},{"id":"R32","pred":"objectOf","subj":"E6-ab-10","obj":"T16"}],"text":"HIV-1 Tat potentiates TNF-induced NF-kappa B activation and cytotoxicity by altering the cellular redox state.\nThis study demonstrates that human immunodeficiency virus type 1 (HIV-1) Tat protein amplifies the activity of tumor necrosis factor (TNF), a cytokine that stimulates HIV-1 replication through activation of NF-kappa B. In HeLa cells stably transfected with the HIV-1 tat gene (HeLa-tat cells), expression of the Tat protein enhanced both TNF-induced activation of NF-kappa B and TNF-mediated cytotoxicity. A similar potentiation of TNF effects was observed in Jurkat T cells and HeLa cells treated with soluble Tat protein. TNF-mediated activation of NF-kappa B and cytotoxicity involves the intracellular formation of reactive oxygen intermediates. Therefore, Tat-mediated effects on the cellular redox state were analyzed. In both T cells and HeLa cells HIV-1 Tat suppressed the expression of Mn-dependent superoxide dismutase (Mn-SOD), a mitochondrial enzyme that is part of the cellular defense system against oxidative stress. Thus, Mn-SOD RNA protein levels and activity were markedly reduced in the presence of Tat. Decreased Mn-SOD expression was associated with decreased levels of glutathione and a lower ratio of reduced:oxidized glutathione. A truncated Tat protein (Tat1-72), known to transactivate the HIV-1 long terminal repeat (LTR), no longer affected Mn-SOD expression, the cellular redox state or TNF-mediated cytotoxicity. Thus, our experiments demonstrate that the C-terminal region of HIV-1 Tat is required to suppress Mn-SOD expression and to induce pro-oxidative conditions reflected by a drop in reduced glutathione (GSH) and the GSH:oxidized GSH (GSSG) ratio.(ABSTRACT TRUNCATED AT 250 WORDS)"}
pubmed-sentences-benchmark
{"project":"pubmed-sentences-benchmark","denotations":[{"id":"S1","span":{"begin":0,"end":110},"obj":"Sentence"},{"id":"S2","span":{"begin":111,"end":329},"obj":"Sentence"},{"id":"S3","span":{"begin":330,"end":516},"obj":"Sentence"},{"id":"S4","span":{"begin":517,"end":634},"obj":"Sentence"},{"id":"S5","span":{"begin":635,"end":760},"obj":"Sentence"},{"id":"S6","span":{"begin":761,"end":835},"obj":"Sentence"},{"id":"S7","span":{"begin":836,"end":1042},"obj":"Sentence"},{"id":"S8","span":{"begin":1043,"end":1133},"obj":"Sentence"},{"id":"S9","span":{"begin":1134,"end":1264},"obj":"Sentence"},{"id":"S10","span":{"begin":1265,"end":1453},"obj":"Sentence"},{"id":"S11","span":{"begin":1454,"end":1696},"obj":"Sentence"},{"id":"S12","span":{"begin":1696,"end":1729},"obj":"Sentence"}],"text":"HIV-1 Tat potentiates TNF-induced NF-kappa B activation and cytotoxicity by altering the cellular redox state.\nThis study demonstrates that human immunodeficiency virus type 1 (HIV-1) Tat protein amplifies the activity of tumor necrosis factor (TNF), a cytokine that stimulates HIV-1 replication through activation of NF-kappa B. In HeLa cells stably transfected with the HIV-1 tat gene (HeLa-tat cells), expression of the Tat protein enhanced both TNF-induced activation of NF-kappa B and TNF-mediated cytotoxicity. A similar potentiation of TNF effects was observed in Jurkat T cells and HeLa cells treated with soluble Tat protein. TNF-mediated activation of NF-kappa B and cytotoxicity involves the intracellular formation of reactive oxygen intermediates. Therefore, Tat-mediated effects on the cellular redox state were analyzed. In both T cells and HeLa cells HIV-1 Tat suppressed the expression of Mn-dependent superoxide dismutase (Mn-SOD), a mitochondrial enzyme that is part of the cellular defense system against oxidative stress. Thus, Mn-SOD RNA protein levels and activity were markedly reduced in the presence of Tat. Decreased Mn-SOD expression was associated with decreased levels of glutathione and a lower ratio of reduced:oxidized glutathione. A truncated Tat protein (Tat1-72), known to transactivate the HIV-1 long terminal repeat (LTR), no longer affected Mn-SOD expression, the cellular redox state or TNF-mediated cytotoxicity. Thus, our experiments demonstrate that the C-terminal region of HIV-1 Tat is required to suppress Mn-SOD expression and to induce pro-oxidative conditions reflected by a drop in reduced glutathione (GSH) and the GSH:oxidized GSH (GSSG) ratio.(ABSTRACT TRUNCATED AT 250 WORDS)"}
genia-medco-coref
{"project":"genia-medco-coref","denotations":[{"id":"C1","span":{"begin":0,"end":9},"obj":"NP"},{"id":"C2","span":{"begin":22,"end":72},"obj":"NP"},{"id":"C3","span":{"begin":85,"end":109},"obj":"NP"},{"id":"C4","span":{"begin":140,"end":195},"obj":"NP"},{"id":"C5","span":{"begin":222,"end":249},"obj":"NP"},{"id":"C7","span":{"begin":253,"end":261},"obj":"NP"},{"id":"C8","span":{"begin":262,"end":266},"obj":"NP"},{"id":"C6","span":{"begin":251,"end":328},"obj":"NP"},{"id":"C9","span":{"begin":368,"end":403},"obj":"NP"},{"id":"C10","span":{"begin":419,"end":434},"obj":"NP"},{"id":"C12","span":{"begin":490,"end":515},"obj":"NP"},{"id":"C11","span":{"begin":444,"end":515},"obj":"NP"},{"id":"C13","span":{"begin":571,"end":600},"obj":"NP"},{"id":"C14","span":{"begin":635,"end":689},"obj":"NP"},{"id":"C15","span":{"begin":796,"end":820},"obj":"NP"},{"id":"C16","span":{"begin":839,"end":866},"obj":"NP"},{"id":"C17","span":{"begin":867,"end":876},"obj":"NP"},{"id":"C19","span":{"begin":906,"end":948},"obj":"NP"},{"id":"C18","span":{"begin":888,"end":948},"obj":"NP"},{"id":"C21","span":{"begin":950,"end":972},"obj":"NP"},{"id":"C22","span":{"begin":973,"end":977},"obj":"NP"},{"id":"C20","span":{"begin":950,"end":1041},"obj":"NP"},{"id":"C23","span":{"begin":1129,"end":1132},"obj":"NP"},{"id":"C24","span":{"begin":1265,"end":1298},"obj":"NP"},{"id":"C25","span":{"begin":1300,"end":1359},"obj":"NP"},{"id":"C26","span":{"begin":1380,"end":1397},"obj":"NP"},{"id":"C27","span":{"begin":1399,"end":1423},"obj":"NP"},{"id":"C28","span":{"begin":1427,"end":1452},"obj":"NP"},{"id":"C29","span":{"begin":1518,"end":1527},"obj":"NP"},{"id":"C30","span":{"begin":1552,"end":1569},"obj":"NP"}],"relations":[{"id":"R1","pred":"coref-relat","subj":"C8","obj":"C7"},{"id":"R2","pred":"coref-appos","subj":"C6","obj":"C5"},{"id":"R3","pred":"coref-ident","subj":"C9","obj":"C1"},{"id":"R4","pred":"coref-ident","subj":"C10","obj":"C4"},{"id":"R5","pred":"coref-ident","subj":"C11","obj":"C2"},{"id":"R6","pred":"coref-ident","subj":"C14","obj":"C11"},{"id":"R7","pred":"coref-ident","subj":"C15","obj":"C3"},{"id":"R8","pred":"coref-ident","subj":"C16","obj":"C13"},{"id":"R9","pred":"coref-ident","subj":"C17","obj":"C9"},{"id":"R10","pred":"coref-relat","subj":"C22","obj":"C21"},{"id":"R11","pred":"coref-appos","subj":"C20","obj":"C19"},{"id":"R12","pred":"coref-ident","subj":"C23","obj":"C10"},{"id":"R13","pred":"coref-appos","subj":"C25","obj":"C24"},{"id":"R14","pred":"coref-ident","subj":"C26","obj":"C18"},{"id":"R15","pred":"coref-ident","subj":"C27","obj":"C15"},{"id":"R16","pred":"coref-ident","subj":"C28","obj":"C12"},{"id":"R17","pred":"coref-ident","subj":"C29","obj":"C9"},{"id":"R18","pred":"coref-ident","subj":"C30","obj":"C26"}],"text":"HIV-1 Tat potentiates TNF-induced NF-kappa B activation and cytotoxicity by altering the cellular redox state.\nThis study demonstrates that human immunodeficiency virus type 1 (HIV-1) Tat protein amplifies the activity of tumor necrosis factor (TNF), a cytokine that stimulates HIV-1 replication through activation of NF-kappa B. In HeLa cells stably transfected with the HIV-1 tat gene (HeLa-tat cells), expression of the Tat protein enhanced both TNF-induced activation of NF-kappa B and TNF-mediated cytotoxicity. A similar potentiation of TNF effects was observed in Jurkat T cells and HeLa cells treated with soluble Tat protein. TNF-mediated activation of NF-kappa B and cytotoxicity involves the intracellular formation of reactive oxygen intermediates. Therefore, Tat-mediated effects on the cellular redox state were analyzed. In both T cells and HeLa cells HIV-1 Tat suppressed the expression of Mn-dependent superoxide dismutase (Mn-SOD), a mitochondrial enzyme that is part of the cellular defense system against oxidative stress. Thus, Mn-SOD RNA protein levels and activity were markedly reduced in the presence of Tat. Decreased Mn-SOD expression was associated with decreased levels of glutathione and a lower ratio of reduced:oxidized glutathione. A truncated Tat protein (Tat1-72), known to transactivate the HIV-1 long terminal repeat (LTR), no longer affected Mn-SOD expression, the cellular redox state or TNF-mediated cytotoxicity. Thus, our experiments demonstrate that the C-terminal region of HIV-1 Tat is required to suppress Mn-SOD expression and to induce pro-oxidative conditions reflected by a drop in reduced glutathione (GSH) and the GSH:oxidized GSH (GSSG) ratio.(ABSTRACT TRUNCATED AT 250 WORDS)"}
GENIAcorpus
{"project":"GENIAcorpus","denotations":[{"id":"T1","span":{"begin":0,"end":5},"obj":"virus"},{"id":"T2","span":{"begin":22,"end":25},"obj":"protein_family_or_group"},{"id":"T3","span":{"begin":34,"end":44},"obj":"protein_molecule"},{"id":"T4","span":{"begin":60,"end":72},"obj":"other_name"},{"id":"T5","span":{"begin":140,"end":175},"obj":"virus"},{"id":"T6","span":{"begin":177,"end":182},"obj":"virus"},{"id":"T7","span":{"begin":222,"end":243},"obj":"protein_family_or_group"},{"id":"T8","span":{"begin":245,"end":248},"obj":"protein_molecule"},{"id":"T9","span":{"begin":278,"end":283},"obj":"virus"},{"id":"T10","span":{"begin":318,"end":328},"obj":"protein_molecule"},{"id":"T11","span":{"begin":333,"end":343},"obj":"cell_line"},{"id":"T12","span":{"begin":372,"end":377},"obj":"virus"},{"id":"T13","span":{"begin":388,"end":402},"obj":"cell_line"},{"id":"T14","span":{"begin":423,"end":434},"obj":"protein_molecule"},{"id":"T15","span":{"begin":449,"end":452},"obj":"protein_molecule"},{"id":"T16","span":{"begin":475,"end":485},"obj":"protein_molecule"},{"id":"T17","span":{"begin":490,"end":493},"obj":"protein_molecule"},{"id":"T18","span":{"begin":543,"end":546},"obj":"protein_molecule"},{"id":"T19","span":{"begin":590,"end":600},"obj":"cell_line"},{"id":"T20","span":{"begin":622,"end":633},"obj":"protein_molecule"},{"id":"T21","span":{"begin":635,"end":638},"obj":"protein_molecule"},{"id":"T22","span":{"begin":662,"end":672},"obj":"protein_molecule"},{"id":"T23","span":{"begin":730,"end":759},"obj":"inorganic"},{"id":"T24","span":{"begin":772,"end":775},"obj":"protein_molecule"},{"id":"T25","span":{"begin":800,"end":820},"obj":"other_name"},{"id":"T26","span":{"begin":844,"end":851},"obj":"cell_type"},{"id":"T27","span":{"begin":856,"end":866},"obj":"cell_line"},{"id":"T28","span":{"begin":867,"end":872},"obj":"virus"},{"id":"T29","span":{"begin":906,"end":939},"obj":"protein_molecule"},{"id":"T30","span":{"begin":941,"end":947},"obj":"protein_molecule"},{"id":"T31","span":{"begin":952,"end":972},"obj":"protein_molecule"},{"id":"T32","span":{"begin":1025,"end":1041},"obj":"other_name"},{"id":"T33","span":{"begin":1049,"end":1055},"obj":"protein_molecule"},{"id":"T34","span":{"begin":1129,"end":1132},"obj":"protein_molecule"},{"id":"T35","span":{"begin":1144,"end":1150},"obj":"protein_molecule"},{"id":"T36","span":{"begin":1202,"end":1213},"obj":"peptide"},{"id":"T37","span":{"begin":1252,"end":1263},"obj":"peptide"},{"id":"T38","span":{"begin":1277,"end":1280},"obj":"protein_molecule"},{"id":"T39","span":{"begin":1290,"end":1297},"obj":"protein_molecule"},{"id":"T40","span":{"begin":1327,"end":1332},"obj":"virus"},{"id":"T41","span":{"begin":1355,"end":1358},"obj":"DNA_domain_or_region"},{"id":"T42","span":{"begin":1380,"end":1386},"obj":"protein_molecule"},{"id":"T43","span":{"begin":1403,"end":1423},"obj":"other_name"},{"id":"T44","span":{"begin":1427,"end":1430},"obj":"protein_molecule"},{"id":"T45","span":{"begin":1497,"end":1514},"obj":"protein_domain_or_region"},{"id":"T46","span":{"begin":1518,"end":1523},"obj":"virus"},{"id":"T47","span":{"begin":1524,"end":1527},"obj":"protein_molecule"},{"id":"T48","span":{"begin":1552,"end":1558},"obj":"protein_molecule"},{"id":"T49","span":{"begin":1640,"end":1651},"obj":"peptide"},{"id":"T50","span":{"begin":1653,"end":1656},"obj":"protein_molecule"},{"id":"T51","span":{"begin":1666,"end":1678},"obj":"other_name"},{"id":"T52","span":{"begin":1679,"end":1682},"obj":"peptide"},{"id":"T53","span":{"begin":1684,"end":1688},"obj":"peptide"}],"text":"HIV-1 Tat potentiates TNF-induced NF-kappa B activation and cytotoxicity by altering the cellular redox state.\nThis study demonstrates that human immunodeficiency virus type 1 (HIV-1) Tat protein amplifies the activity of tumor necrosis factor (TNF), a cytokine that stimulates HIV-1 replication through activation of NF-kappa B. In HeLa cells stably transfected with the HIV-1 tat gene (HeLa-tat cells), expression of the Tat protein enhanced both TNF-induced activation of NF-kappa B and TNF-mediated cytotoxicity. A similar potentiation of TNF effects was observed in Jurkat T cells and HeLa cells treated with soluble Tat protein. TNF-mediated activation of NF-kappa B and cytotoxicity involves the intracellular formation of reactive oxygen intermediates. Therefore, Tat-mediated effects on the cellular redox state were analyzed. In both T cells and HeLa cells HIV-1 Tat suppressed the expression of Mn-dependent superoxide dismutase (Mn-SOD), a mitochondrial enzyme that is part of the cellular defense system against oxidative stress. Thus, Mn-SOD RNA protein levels and activity were markedly reduced in the presence of Tat. Decreased Mn-SOD expression was associated with decreased levels of glutathione and a lower ratio of reduced:oxidized glutathione. A truncated Tat protein (Tat1-72), known to transactivate the HIV-1 long terminal repeat (LTR), no longer affected Mn-SOD expression, the cellular redox state or TNF-mediated cytotoxicity. Thus, our experiments demonstrate that the C-terminal region of HIV-1 Tat is required to suppress Mn-SOD expression and to induce pro-oxidative conditions reflected by a drop in reduced glutathione (GSH) and the GSH:oxidized GSH (GSSG) ratio.(ABSTRACT TRUNCATED AT 250 WORDS)"}
metamap-sample
{"project":"metamap-sample","denotations":[{"id":"T1","span":{"begin":1519,"end":1524},"obj":"C0019704"},{"id":"T2","span":{"begin":868,"end":873},"obj":"C0019704"},{"id":"T3","span":{"begin":373,"end":378},"obj":"C0019704"},{"id":"T4","span":{"begin":279,"end":284},"obj":"C0019704"},{"id":"T5","span":{"begin":141,"end":176},"obj":"C0019704"},{"id":"T6","span":{"begin":1,"end":6},"obj":"C0019704"},{"id":"T7","span":{"begin":1413,"end":1424},"obj":"C0030012"},{"id":"T8","span":{"begin":810,"end":820},"obj":"C0030012"},{"id":"T9","span":{"begin":99,"end":110},"obj":"C0030012"},{"id":"T10","span":{"begin":35,"end":45},"obj":"C0079904"},{"id":"T11","span":{"begin":1441,"end":1453},"obj":"C0596402"},{"id":"T12","span":{"begin":678,"end":690},"obj":"C0596402"},{"id":"T13","span":{"begin":504,"end":516},"obj":"C0596402"},{"id":"T14","span":{"begin":61,"end":73},"obj":"C0596402"},{"id":"T15","span":{"begin":1578,"end":1584},"obj":"C0205263"},{"id":"T16","span":{"begin":454,"end":461},"obj":"C0205263"},{"id":"T17","span":{"begin":27,"end":34},"obj":"C0205263"},{"id":"T18","span":{"begin":1404,"end":1412},"obj":"C0007634"},{"id":"T19","span":{"begin":994,"end":1002},"obj":"C0007634"},{"id":"T20","span":{"begin":801,"end":809},"obj":"C0007634"},{"id":"T21","span":{"begin":90,"end":98},"obj":"C0007634"},{"id":"T22","span":{"begin":77,"end":85},"obj":"C0392747"},{"id":"T23","span":{"begin":1553,"end":1559},"obj":"C0968147"},{"id":"T24","span":{"begin":1381,"end":1387},"obj":"C0968147"},{"id":"T25","span":{"begin":1145,"end":1151},"obj":"C0968147"},{"id":"T26","span":{"begin":1050,"end":1056},"obj":"C0968147"},{"id":"T27","span":{"begin":857,"end":867},"obj":"C0018873"},{"id":"T28","span":{"begin":591,"end":601},"obj":"C0018873"},{"id":"T29","span":{"begin":1278,"end":1288},"obj":"C0039341"},{"id":"T30","span":{"begin":623,"end":634},"obj":"C0039341"},{"id":"T31","span":{"begin":845,"end":852},"obj":"C0039194"},{"id":"T32","span":{"begin":1203,"end":1213},"obj":"C0017817"},{"id":"T33","span":{"begin":1685,"end":1689},"obj":"C0061516"},{"id":"T34","span":{"begin":1244,"end":1264},"obj":"C0061516"},{"id":"T35","span":{"begin":379,"end":387},"obj":"C0017375"},{"id":"T36","span":{"begin":1328,"end":1354},"obj":"C0079517"},{"id":"T37","span":{"begin":953,"end":966},"obj":"C0026237"},{"id":"T38","span":{"begin":1428,"end":1431},"obj":"C1323304"},{"id":"T39","span":{"begin":636,"end":639},"obj":"C1323304"},{"id":"T40","span":{"begin":223,"end":244},"obj":"C1323304"},{"id":"T41","span":{"begin":1553,"end":1559},"obj":"C0851827"},{"id":"T42","span":{"begin":1381,"end":1387},"obj":"C0851827"},{"id":"T43","span":{"begin":1145,"end":1151},"obj":"C0851827"},{"id":"T44","span":{"begin":1050,"end":1056},"obj":"C0851827"},{"id":"T45","span":{"begin":910,"end":919},"obj":"C0851827"},{"id":"T46","span":{"begin":1585,"end":1588},"obj":"C0033382"},{"id":"T47","span":{"begin":1307,"end":1309},"obj":"C1883351"},{"id":"T48","span":{"begin":1560,"end":1570},"obj":"C0185117"},{"id":"T49","span":{"begin":1388,"end":1398},"obj":"C0185117"},{"id":"T50","span":{"begin":1152,"end":1162},"obj":"C0185117"},{"id":"T51","span":{"begin":893,"end":902},"obj":"C0185117"},{"id":"T52","span":{"begin":1026,"end":1042},"obj":"C0242606"},{"id":"T53","span":{"begin":1633,"end":1652},"obj":"C0034917"},{"id":"T54","span":{"begin":254,"end":262},"obj":"C0079189"},{"id":"T55","span":{"begin":1432,"end":1439},"obj":"C0127400"},{"id":"T56","span":{"begin":777,"end":785},"obj":"C0127400"},{"id":"T57","span":{"begin":640,"end":648},"obj":"C0127400"},{"id":"T58","span":{"begin":495,"end":502},"obj":"C0127400"},{"id":"T59","span":{"begin":285,"end":296},"obj":"C0598312"},{"id":"T60","span":{"begin":462,"end":486},"obj":"C1749855"},{"id":"T61","span":{"begin":305,"end":329},"obj":"C1749855"},{"id":"T62","span":{"begin":1544,"end":1552},"obj":"C1260953"},{"id":"T63","span":{"begin":878,"end":888},"obj":"C1260953"},{"id":"T64","span":{"begin":1057,"end":1059},"obj":"C0035668"},{"id":"T65","span":{"begin":1691,"end":1696},"obj":"C0456603"},{"id":"T66","span":{"begin":1227,"end":1232},"obj":"C0456603"},{"id":"T67","span":{"begin":1080,"end":1088},"obj":"C1561536"},{"id":"T68","span":{"begin":211,"end":219},"obj":"C1561536"},{"id":"T69","span":{"begin":1135,"end":1144},"obj":"C0205216"},{"id":"T70","span":{"begin":1183,"end":1192},"obj":"C0205216"},{"id":"T71","span":{"begin":1236,"end":1243},"obj":"C0392756"},{"id":"T72","span":{"begin":1103,"end":1110},"obj":"C0392756"},{"id":"T73","span":{"begin":786,"end":793},"obj":"C1280500"},{"id":"T74","span":{"begin":548,"end":555},"obj":"C1280500"},{"id":"T75","span":{"begin":967,"end":973},"obj":"C0014442"},{"id":"T76","span":{"begin":627,"end":634},"obj":"C0033684"},{"id":"T77","span":{"begin":718,"end":727},"obj":"C0220781"},{"id":"T78","span":{"begin":827,"end":835},"obj":"C0936012"},{"id":"T79","span":{"begin":436,"end":444},"obj":"C2349975"},{"id":"T80","span":{"begin":1301,"end":1306},"obj":"C0205309"},{"id":"T81","span":{"begin":1094,"end":1102},"obj":"C0522501"},{"id":"T82","span":{"begin":1532,"end":1540},"obj":"C1514873"},{"id":"T83","span":{"begin":117,"end":122},"obj":"C2603343"},{"id":"T84","span":{"begin":1465,"end":1476},"obj":"C0681814"},{"id":"T85","span":{"begin":1291,"end":1295},"obj":"C1422674"},{"id":"T86","span":{"begin":615,"end":626},"obj":"C1420590"},{"id":"T87","span":{"begin":602,"end":614},"obj":"C0332293"},{"id":"T88","span":{"begin":1599,"end":1609},"obj":"C1705253"},{"id":"T89","span":{"begin":1167,"end":1182},"obj":"C0332281"},{"id":"T90","span":{"begin":982,"end":989},"obj":"C1292711"},{"id":"T91","span":{"begin":1061,"end":1075},"obj":"C0428479"},{"id":"T92","span":{"begin":1625,"end":1629},"obj":"C2348338"},{"id":"T93","span":{"begin":1610,"end":1619},"obj":"C0558058"},{"id":"T94","span":{"begin":560,"end":568},"obj":"C1441672"},{"id":"T95","span":{"begin":615,"end":622},"obj":"C1749467"},{"id":"T96","span":{"begin":1498,"end":1508},"obj":"C1707271"},{"id":"T97","span":{"begin":1193,"end":1199},"obj":"C0441889"},{"id":"T98","span":{"begin":1118,"end":1126},"obj":"C0392148"},{"id":"T99","span":{"begin":528,"end":540},"obj":"C0279023"},{"id":"T100","span":{"begin":1509,"end":1515},"obj":"C0205147"},{"id":"T101","span":{"begin":1589,"end":1597},"obj":"C0311404"},{"id":"T102","span":{"begin":1328,"end":1333},"obj":"C0441729"},{"id":"T103","span":{"begin":1372,"end":1380},"obj":"C0392760"},{"id":"T104","span":{"begin":1671,"end":1679},"obj":"C0030011"},{"id":"T105","span":{"begin":544,"end":547},"obj":"C0333516"},{"id":"T106","span":{"begin":1365,"end":1370},"obj":"C0205166"},{"id":"T107","span":{"begin":1221,"end":1226},"obj":"C0441994"},{"id":"T108","span":{"begin":1003,"end":1010},"obj":"C1880266"},{"id":"T109","span":{"begin":1011,"end":1017},"obj":"C0449913"},{"id":"T110","span":{"begin":704,"end":717},"obj":"C0178719"},{"id":"T111","span":{"begin":520,"end":527},"obj":"C2348205"},{"id":"T112","span":{"begin":445,"end":449},"obj":"C0238767"}],"text":"HIV-1 Tat potentiates TNF-induced NF-kappa B activation and cytotoxicity by altering the cellular redox state.\nThis study demonstrates that human immunodeficiency virus type 1 (HIV-1) Tat protein amplifies the activity of tumor necrosis factor (TNF), a cytokine that stimulates HIV-1 replication through activation of NF-kappa B. In HeLa cells stably transfected with the HIV-1 tat gene (HeLa-tat cells), expression of the Tat protein enhanced both TNF-induced activation of NF-kappa B and TNF-mediated cytotoxicity. A similar potentiation of TNF effects was observed in Jurkat T cells and HeLa cells treated with soluble Tat protein. TNF-mediated activation of NF-kappa B and cytotoxicity involves the intracellular formation of reactive oxygen intermediates. Therefore, Tat-mediated effects on the cellular redox state were analyzed. In both T cells and HeLa cells HIV-1 Tat suppressed the expression of Mn-dependent superoxide dismutase (Mn-SOD), a mitochondrial enzyme that is part of the cellular defense system against oxidative stress. Thus, Mn-SOD RNA protein levels and activity were markedly reduced in the presence of Tat. Decreased Mn-SOD expression was associated with decreased levels of glutathione and a lower ratio of reduced:oxidized glutathione. A truncated Tat protein (Tat1-72), known to transactivate the HIV-1 long terminal repeat (LTR), no longer affected Mn-SOD expression, the cellular redox state or TNF-mediated cytotoxicity. Thus, our experiments demonstrate that the C-terminal region of HIV-1 Tat is required to suppress Mn-SOD expression and to induce pro-oxidative conditions reflected by a drop in reduced glutathione (GSH) and the GSH:oxidized GSH (GSSG) ratio.(ABSTRACT TRUNCATED AT 250 WORDS)"}