PubMed:7594540 JSONTXT

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    jnlpba-st-training

    {"project":"jnlpba-st-training","denotations":[{"id":"T1","span":{"begin":0,"end":18},"obj":"protein"},{"id":"T2","span":{"begin":33,"end":52},"obj":"DNA"},{"id":"T3","span":{"begin":56,"end":63},"obj":"cell_type"},{"id":"T4","span":{"begin":65,"end":94},"obj":"DNA"},{"id":"T5","span":{"begin":96,"end":101},"obj":"DNA"},{"id":"T6","span":{"begin":115,"end":131},"obj":"DNA"},{"id":"T7","span":{"begin":164,"end":179},"obj":"DNA"},{"id":"T8","span":{"begin":193,"end":214},"obj":"protein"},{"id":"T9","span":{"begin":226,"end":231},"obj":"DNA"},{"id":"T10","span":{"begin":247,"end":270},"obj":"DNA"},{"id":"T11","span":{"begin":276,"end":290},"obj":"cell_line"},{"id":"T12","span":{"begin":306,"end":310},"obj":"DNA"},{"id":"T13","span":{"begin":320,"end":334},"obj":"protein"},{"id":"T14","span":{"begin":335,"end":343},"obj":"protein"},{"id":"T15","span":{"begin":359,"end":369},"obj":"protein"},{"id":"T16","span":{"begin":372,"end":383},"obj":"RNA"},{"id":"T17","span":{"begin":397,"end":417},"obj":"cell_line"},{"id":"T18","span":{"begin":429,"end":444},"obj":"cell_line"},{"id":"T19","span":{"begin":445,"end":448},"obj":"cell_line"},{"id":"T20","span":{"begin":461,"end":473},"obj":"cell_line"},{"id":"T21","span":{"begin":475,"end":482},"obj":"protein"},{"id":"T22","span":{"begin":539,"end":544},"obj":"DNA"},{"id":"T23","span":{"begin":546,"end":551},"obj":"DNA"},{"id":"T24","span":{"begin":558,"end":588},"obj":"protein"},{"id":"T25","span":{"begin":616,"end":628},"obj":"cell_line"},{"id":"T26","span":{"begin":683,"end":689},"obj":"protein"},{"id":"T27","span":{"begin":699,"end":718},"obj":"protein"},{"id":"T28","span":{"begin":738,"end":744},"obj":"protein"},{"id":"T29","span":{"begin":772,"end":820},"obj":"DNA"},{"id":"T30","span":{"begin":835,"end":857},"obj":"protein"},{"id":"T31","span":{"begin":865,"end":884},"obj":"DNA"},{"id":"T32","span":{"begin":906,"end":918},"obj":"cell_line"},{"id":"T33","span":{"begin":970,"end":990},"obj":"DNA"},{"id":"T34","span":{"begin":1024,"end":1038},"obj":"protein"},{"id":"T35","span":{"begin":1056,"end":1068},"obj":"protein"},{"id":"T36","span":{"begin":1114,"end":1120},"obj":"protein"},{"id":"T37","span":{"begin":1170,"end":1189},"obj":"DNA"},{"id":"T38","span":{"begin":1193,"end":1200},"obj":"cell_type"}],"text":"Nuclear factor-IL6 activates the human IL-4 promoter in T cells.\nPositive regulatory element I (PRE-I) is a strong enhancer element essential for expression of the human IL-4 gene. To identify transcription factors binding to PRE-I, we screened a cDNA expression library from Jurkat T cells and isolated a cDNA encoding nuclear factor (NF)-IL6 (also known as C/EBP beta). NF-IL6 mRNA was found in human Jurkat T cells and in the mouse Th2 clone D10, but not in Th1 clone 29. rNF-IL6 expressed in bacteria was shown to specifically bind to PRE-I. PRE-I forms multiple DNA-protein complexes with nuclear extracts from Jurkat cells. Some of these complexes were demonstrated to contain NF-IL6 by using anti-C/EBP beta Abs. Overexpression of NF-IL6 enhanced expression of the chloramphenicol acetyl transferase reporter gene linked to the PRE-I-thymidine kinase or the human IL-4 promoter more than 10-fold in Jurkat cells. Promoter deletion studies revealed two additional NF-IL6 binding sites located at positions -44 to -36 (C/EBP proximal) and -87 to -79 (C/EBP medial), respectively. Our results demonstrate that NF-IL6 is involved in transcriptional activation of the human IL-4 promoter in T cells."}

    semrep-sample

    {"project":"semrep-sample","denotations":[{"id":"E1-ti-1","span":{"begin":0,"end":7},"obj":"cui:C0521447"},{"id":"E2-ti-1","span":{"begin":8,"end":14},"obj":"cui:C1521761"},{"id":"E3-ti-1","span":{"begin":15,"end":18},"obj":"cui:C0021760"},{"id":"E4-ti-1","span":{"begin":33,"end":38},"obj":"cui:C0020114"},{"id":"E5-ti-1","span":{"begin":39,"end":43},"obj":"cui:C0021758"},{"id":"E6-ti-1","span":{"begin":56,"end":63},"obj":"cui:C0039194"},{"id":"T1","span":{"begin":33,"end":43},"obj":"PART_OF"},{"id":"T2","span":{"begin":53,"end":55},"obj":"LOCATION_OF"},{"id":"E1-ab-1","span":{"begin":65,"end":73},"obj":"cui:C1446409"},{"id":"E2-ab-1","span":{"begin":74,"end":92},"obj":"cui:C1514827"},{"id":"E3-ab-1","span":{"begin":108,"end":114},"obj":"cui:C0442821"},{"id":"E4-ab-1","span":{"begin":115,"end":131},"obj":"cui:C0014290"},{"id":"E5-ab-1","span":{"begin":132,"end":141},"obj":"cui:C0205224"},{"id":"E6-ab-1","span":{"begin":146,"end":156},"obj":"cui:C0185117"},{"id":"E7-ab-1","span":{"begin":164,"end":169},"obj":"cui:C0020114"},{"id":"E8-ab-1","span":{"begin":170,"end":179},"obj":"cui:C1334119"},{"id":"T3","span":{"begin":164,"end":179},"obj":"PART_OF"},{"id":"E1-ab-2","span":{"begin":193,"end":214},"obj":"cui:C0040648"},{"id":"E2-ab-2","span":{"begin":226,"end":231},"obj":"cui:C1446409"},{"id":"E3-ab-2","span":{"begin":226,"end":231},"obj":"cui:C1514827"},{"id":"E4-ab-2","span":{"begin":247,"end":251},"obj":"cui:C0006556"},{"id":"E5-ab-2","span":{"begin":252,"end":270},"obj":"cui:C1517023"},{"id":"E6-ab-2","span":{"begin":276,"end":290},"obj":"cui:C0376448"},{"id":"E7-ab-2","span":{"begin":306,"end":310},"obj":"cui:C0006556"},{"id":"E8-ab-2","span":{"begin":320,"end":327},"obj":"cui:C0521447"},{"id":"E9-ab-2","span":{"begin":328,"end":334},"obj":"cui:C1521761"},{"id":"E10-ab-2","span":{"begin":340,"end":343},"obj":"cui:C0021760"},{"id":"E11-ab-2","span":{"begin":359,"end":369},"obj":"cui:C0209548"},{"id":"T4","span":{"begin":271,"end":275},"obj":"LOCATION_OF"},{"id":"E1-ab-3","span":{"begin":372,"end":374},"obj":"cui:C0521447"},{"id":"E2-ab-3","span":{"begin":372,"end":374},"obj":"cui:C1521761"},{"id":"E3-ab-3","span":{"begin":375,"end":378},"obj":"cui:C0021760"},{"id":"E4-ab-3","span":{"begin":379,"end":383},"obj":"cui:C0035696"},{"id":"E5-ab-3","span":{"begin":397,"end":417},"obj":"cui:C0427861"},{"id":"E6-ab-3","span":{"begin":429,"end":434},"obj":"cui:C0025914"},{"id":"E7-ab-3","span":{"begin":439,"end":444},"obj":"cui:C1522642"},{"id":"E8-ab-3","span":{"begin":445,"end":448},"obj":"entrez:89832"},{"id":"E9-ab-3","span":{"begin":454,"end":457},"obj":"cui:C1518422"},{"id":"E10-ab-3","span":{"begin":461,"end":464},"obj":"entrez:51497"},{"id":"E11-ab-3","span":{"begin":465,"end":470},"obj":"cui:C1522642"},{"id":"T5","span":{"begin":439,"end":448},"obj":"PART_OF"},{"id":"T6","span":{"begin":422,"end":424},"obj":"COEXISTS_WITH"},{"id":"E1-ab-4","span":{"begin":475,"end":478},"obj":"entrez:11074"},{"id":"E2-ab-4","span":{"begin":479,"end":482},"obj":"cui:C0021760"},{"id":"E3-ab-4","span":{"begin":496,"end":504},"obj":"cui:C0004611"},{"id":"E4-ab-4","span":{"begin":539,"end":544},"obj":"cui:C1446409"},{"id":"E5-ab-4","span":{"begin":539,"end":544},"obj":"cui:C1514827"},{"id":"T7","span":{"begin":483,"end":492},"obj":"INTERACTS_WITH"},{"id":"E1-ab-5","span":{"begin":546,"end":551},"obj":"cui:C1446409"},{"id":"E2-ab-5","span":{"begin":546,"end":551},"obj":"cui:C1514827"},{"id":"E3-ab-5","span":{"begin":558,"end":566},"obj":"cui:C0439064"},{"id":"E4-ab-5","span":{"begin":567,"end":570},"obj":"cui:C0012854"},{"id":"E5-ab-5","span":{"begin":571,"end":588},"obj":"cui:C1180347"},{"id":"E6-ab-5","span":{"begin":594,"end":610},"obj":"cui:C1518434"},{"id":"E7-ab-5","span":{"begin":616,"end":628},"obj":"cui:C0376448"},{"id":"T8","span":{"begin":611,"end":615},"obj":"LOCATION_OF"},{"id":"E1-ab-6","span":{"begin":644,"end":653},"obj":"cui:C0439855"},{"id":"E2-ab-6","span":{"begin":683,"end":685},"obj":"cui:C0521447"},{"id":"E3-ab-6","span":{"begin":683,"end":685},"obj":"cui:C1521761"},{"id":"E4-ab-6","span":{"begin":686,"end":689},"obj":"cui:C0021760"},{"id":"E5-ab-6","span":{"begin":706,"end":709},"obj":"entrez:10682"},{"id":"E6-ab-6","span":{"begin":715,"end":718},"obj":"cui:C0000833"},{"id":"E1-ab-7","span":{"begin":738,"end":740},"obj":"cui:C0521447"},{"id":"E2-ab-7","span":{"begin":738,"end":740},"obj":"cui:C1521761"},{"id":"E3-ab-7","span":{"begin":741,"end":744},"obj":"cui:C0021760"},{"id":"E4-ab-7","span":{"begin":754,"end":764},"obj":"cui:C0185117"},{"id":"E5-ab-7","span":{"begin":807,"end":815},"obj":"cui:C0335038"},{"id":"E6-ab-7","span":{"begin":772,"end":820},"obj":"cui:C1366498"},{"id":"E7-ab-7","span":{"begin":835,"end":840},"obj":"cui:C1446409"},{"id":"E8-ab-7","span":{"begin":835,"end":840},"obj":"cui:C1514827"},{"id":"E9-ab-7","span":{"begin":841,"end":857},"obj":"cui:C0040078"},{"id":"E10-ab-7","span":{"begin":865,"end":870},"obj":"cui:C0020114"},{"id":"E11-ab-7","span":{"begin":871,"end":875},"obj":"cui:C002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factor-IL6 activates the human IL-4 promoter in T cells.\nPositive regulatory element I (PRE-I) is a strong enhancer element essential for expression of the human IL-4 gene. To identify transcription factors binding to PRE-I, we screened a cDNA expression library from Jurkat T cells and isolated a cDNA encoding nuclear factor (NF)-IL6 (also known as C/EBP beta). NF-IL6 mRNA was found in human Jurkat T cells and in the mouse Th2 clone D10, but not in Th1 clone 29. rNF-IL6 expressed in bacteria was shown to specifically bind to PRE-I. PRE-I forms multiple DNA-protein complexes with nuclear extracts from Jurkat cells. Some of these complexes were demonstrated to contain NF-IL6 by using anti-C/EBP beta Abs. Overexpression of NF-IL6 enhanced expression of the chloramphenicol acetyl transferase reporter gene linked to the PRE-I-thymidine kinase or the human IL-4 promoter more than 10-fold in Jurkat cells. Promoter deletion studies revealed two additional NF-IL6 binding sites located at positions -44 to -36 (C/EBP proximal) and -87 to -79 (C/EBP medial), respectively. Our results demonstrate that NF-IL6 is involved in transcriptional activation of the human IL-4 promoter in T cells."}

    pubmed-sentences-benchmark

    {"project":"pubmed-sentences-benchmark","denotations":[{"id":"S1","span":{"begin":0,"end":64},"obj":"Sentence"},{"id":"S2","span":{"begin":65,"end":180},"obj":"Sentence"},{"id":"S3","span":{"begin":181,"end":371},"obj":"Sentence"},{"id":"S4","span":{"begin":372,"end":474},"obj":"Sentence"},{"id":"S5","span":{"begin":475,"end":545},"obj":"Sentence"},{"id":"S6","span":{"begin":546,"end":629},"obj":"Sentence"},{"id":"S7","span":{"begin":630,"end":719},"obj":"Sentence"},{"id":"S8","span":{"begin":720,"end":919},"obj":"Sentence"},{"id":"S9","span":{"begin":920,"end":1084},"obj":"Sentence"},{"id":"S10","span":{"begin":1085,"end":1201},"obj":"Sentence"}],"text":"Nuclear factor-IL6 activates the human IL-4 promoter in T cells.\nPositive regulatory element I (PRE-I) is a strong enhancer element essential for expression of the human IL-4 gene. To identify transcription factors binding to PRE-I, we screened a cDNA expression library from Jurkat T cells and isolated a cDNA encoding nuclear factor (NF)-IL6 (also known as C/EBP beta). NF-IL6 mRNA was found in human Jurkat T cells and in the mouse Th2 clone D10, but not in Th1 clone 29. rNF-IL6 expressed in bacteria was shown to specifically bind to PRE-I. PRE-I forms multiple DNA-protein complexes with nuclear extracts from Jurkat cells. Some of these complexes were demonstrated to contain NF-IL6 by using anti-C/EBP beta Abs. Overexpression of NF-IL6 enhanced expression of the chloramphenicol acetyl transferase reporter gene linked to the PRE-I-thymidine kinase or the human IL-4 promoter more than 10-fold in Jurkat cells. Promoter deletion studies revealed two additional NF-IL6 binding sites located at positions -44 to -36 (C/EBP proximal) and -87 to -79 (C/EBP medial), respectively. Our results demonstrate that NF-IL6 is involved in transcriptional activation of the human IL-4 promoter in T cells."}

    genia-medco-coref

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    GENIAcorpus

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