PubMed:7578250
Annnotations
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 10-14 | DNA | denotes | cDNA |
| T2 | 26-36 | cell_type | denotes | NK/T cells |
| T3 | 92-102 | DNA | denotes | cDNA clone |
| T4 | 104-108 | DNA | denotes | B4-2 |
| T5 | 130-182 | DNA | denotes | natural killer (NK) minus T cell subtractive library |
| T6 | 188-192 | DNA | denotes | B4-2 |
| T7 | 212-216 | RNA | denotes | mRNA |
| T8 | 260-274 | protein | denotes | 327 aa protein |
| T9 | 334-342 | DNA | denotes | B4-2 DNA |
| T10 | 446-450 | DNA | denotes | B4-2 |
| T11 | 516-542 | protein | denotes | nuclear targeting sequence |
| T12 | 560-571 | protein | denotes | SPXX motifs |
| T13 | 602-626 | protein | denotes | gene regulatory proteins |
| T14 | 664-668 | DNA | denotes | B4-2 |
| T15 | 716-727 | protein | denotes | SH3 domains |
| T16 | 769-773 | DNA | denotes | B4-2 |
| T17 | 783-805 | DNA | denotes | lymphoid specific gene |
| T18 | 828-846 | cell_line | denotes | hepatoma cell line |
| T19 | 952-968 | protein | denotes | recombinant B4-2 |
| T20 | 982-999 | protein | denotes | 32-34 kDa protein |
| T21 | 1003-1014 | cell_type | denotes | lymphocytes |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 8-36 | NP | denotes | a cDNA from human NK/T cells |
| C2 | 37-42 | NP | denotes | which |
| C3 | 53-88 | NP | denotes | a protein with high proline content |
| C4 | 90-102 | NP | denotes | A cDNA clone |
| C5 | 104-108 | NP | denotes | B4-2 |
| C6 | 184-198 | NP | denotes | The B4-2 clone |
| C7 | 239-241 | NP | denotes | It |
| C8 | 250-319 | NP | denotes | a deduced 327 aa protein with a calculated molecular mass of 35.2 kDa |
| C9 | 446-450 | NP | denotes | B4-2 |
| C10 | 552-571 | NP | denotes | several SPXX motifs |
| C11 | 572-577 | NP | denotes | which |
| C12 | 664-668 | NP | denotes | B4-2 |
| C13 | 769-773 | NP | denotes | B4-2 |
| R1 | C2 | C1 | coref-relat | which,a cDNA from human NK/T cells |
| R2 | C5 | C4 | coref-appos | B4-2,A cDNA clone |
| R3 | C6 | C4 | coref-ident | The B4-2 clone,A cDNA clone |
| R4 | C7 | C6 | coref-pron | It,The B4-2 clone |
| R5 | C8 | C3 | coref-ident | a deduced 327 aa protein with a calculated molecular mass of 35.2 kDa,a protein with high proline content |
| R6 | C9 | C6 | coref-ident | B4-2,The B4-2 clone |
| R7 | C11 | C10 | coref-relat | which,several SPXX motifs |
| R8 | C12 | C9 | coref-ident | B4-2,B4-2 |
| R9 | C13 | C12 | coref-ident | B4-2,B4-2 |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-89 | Sentence | denotes | Cloning a cDNA from human NK/T cells which codes for a protein with high proline content. |
| S2 | 90-183 | Sentence | denotes | A cDNA clone, B4-2, was isolated from a natural killer (NK) minus T cell subtractive library. |
| S3 | 184-238 | Sentence | denotes | The B4-2 clone coded for an mRNA of 2061 bp in length. |
| S4 | 239-320 | Sentence | denotes | It encodes a deduced 327 aa protein with a calculated molecular mass of 35.2 kDa. |
| S5 | 321-436 | Sentence | denotes | Searching of B4-2 DNA and protein sequences against various databases revealed no high homology to other sequences. |
| S6 | 437-627 | Sentence | denotes | However, B4-2 has an unusually high proline content (13%), contains a putative nuclear targeting sequence, and has several SPXX motifs which are frequently found in gene regulatory proteins. |
| S7 | 628-728 | Sentence | denotes | One of the stretches of prolines in B4-2 closely resembles the ligand for proteins with SH3 domains. |
| S8 | 729-913 | Sentence | denotes | Northern hybridization data showed that B4-2 is not a lymphoid specific gene and is expressed in a hepatoma cell line and also weakly transcribed or absent in a variety of other cells. |
| S9 | 914-1015 | Sentence | denotes | A polyclonal antiserum raised against recombinant B4-2 recognizes a 32-34 kDa protein in lymphocytes. |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 10-14 | DNA_family_or_group | denotes | cDNA |
| T2 | 26-29 | cell_type | denotes | NK/ |
| T3 | 29-36 | cell_type | denotes | T cells |
| T4 | 73-80 | amino_acid_monomer | denotes | proline |
| T5 | 92-102 | DNA_family_or_group | denotes | cDNA clone |
| T6 | 104-108 | DNA_molecule | denotes | B4-2 |
| T7 | 130-182 | DNA_family_or_group | denotes | natural killer (NK) minus T cell subtractive library |
| T8 | 188-192 | DNA_molecule | denotes | B4-2 |
| T9 | 212-216 | RNA_family_or_group | denotes | mRNA |
| T10 | 260-274 | protein_molecule | denotes | 327 aa protein |
| T11 | 293-307 | other_name | denotes | molecular mass |
| T12 | 334-338 | DNA_molecule | denotes | B4-2 |
| T13 | 347-364 | other_name | denotes | protein sequences |
| T14 | 446-450 | DNA_molecule | denotes | B4-2 |
| T15 | 473-480 | amino_acid_monomer | denotes | proline |
| T16 | 516-542 | protein_domain_or_region | denotes | nuclear targeting sequence |
| T17 | 602-626 | protein_family_or_group | denotes | gene regulatory proteins |
| T18 | 652-660 | amino_acid_monomer | denotes | prolines |
| T19 | 664-668 | DNA_molecule | denotes | B4-2 |
| T20 | 716-727 | protein_domain_or_region | denotes | SH3 domains |
| T21 | 769-773 | DNA_molecule | denotes | B4-2 |
| T22 | 783-805 | DNA_family_or_group | denotes | lymphoid specific gene |
| T23 | 828-846 | cell_line | denotes | hepatoma cell line |
| T24 | 916-936 | other_organic_compound | denotes | polyclonal antiserum |
| T25 | 952-963 | protein_molecule | denotes | recombinant |
| T26 | 964-968 | DNA_molecule | denotes | B4-2 |
| T27 | 982-999 | protein_molecule | denotes | 32-34 kDa protein |
| T28 | 1003-1014 | cell_type | denotes | lymphocytes |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 828-836 | Disease | denotes | hepatoma | http://purl.obolibrary.org/obo/MONDO_0007256 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 20-25 | OrganismTaxon | denotes | human | 9606 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 156-162 | Body_part | denotes | T cell | http://purl.obolibrary.org/obo/CL_0000084 |
| T2 | 1003-1014 | Body_part | denotes | lymphocytes | http://purl.obolibrary.org/obo/CL_0000542 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 29-36 | Cell | denotes | T cells | http://purl.obolibrary.org/obo/CL:0000084 |
| T2 | 156-162 | Cell | denotes | T cell | http://purl.obolibrary.org/obo/CL:0000084 |
| T3 | 1003-1014 | Cell | denotes | lymphocytes | http://purl.obolibrary.org/obo/CL:0000542 |