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Test-Species-PubTator

Id Subject Object Predicate Lexical cue resolved_to
2 25-57 Chemical denotes sialosylgalactosyldiacylglycerol -
3 61-66 Species denotes mouse 10090
39 151-156 Species denotes mouse 10090
40 202-207 Chemical denotes lipid MESH:D008055
41 226-265 Chemical denotes 1,2-diacyl-3-beta-D-galactosyl (3 comes -
42 271-306 Chemical denotes 2 N-acetylneuraminosyl)-sn-glycerol -
43 309-341 Chemical denotes sialosylgalactosyldiacylglycerol -
44 348-390 Chemical denotes 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol -
45 392-416 Chemical denotes galactosyldiacylglycerol MESH:C475298
46 422-469 Chemical denotes cytidine-5'-monophospho-N-acetylneuraminic acid MESH:C561601
47 471-481 Chemical denotes CMP-NeuNAc MESH:C561601
48 652-676 Chemical denotes galactosyldiacylglycerol MESH:C475298
49 700-710 Chemical denotes CMP-NeuNAc MESH:C561601
50 828-833 Chemical denotes lipid MESH:D008055
51 850-874 Chemical denotes galactosyldiacylglycerol MESH:C475298
52 879-902 Chemical denotes N-acetylneuraminic acid MESH:D019158
53 904-907 Chemical denotes 14C MESH:C000615234
54 916-921 Chemical denotes lipid MESH:D008055
55 940-968 Chemical denotes [14C]N-acetylneuraminic acid -
56 974-976 Chemical denotes 3H MESH:D014316
57 985-990 Chemical denotes lipid MESH:D008055
58 1009-1037 Chemical denotes [3H]galactosyldiacylglycerol -
59 1107-1117 Chemical denotes silica gel MESH:D058428
60 1123-1128 Chemical denotes water MESH:D014867
61 1206-1212 Chemical denotes lipids MESH:D008055
62 1273-1276 Chemical denotes 14C MESH:C000615234
63 1277-1279 Chemical denotes 3H MESH:D014316
64 1322-1327 Chemical denotes lipid MESH:D008055
65 1329-1371 Chemical denotes [14C]sialosyl-[3H]galactosyldiacylglycerol -
66 1408-1413 Chemical denotes lipid MESH:D008055
67 1533-1551 Chemical denotes galactosylglycerol -
68 1556-1579 Chemical denotes N-acetylneuraminic acid MESH:D019158
69 1648-1650 Chemical denotes 3H MESH:D014316
70 1659-1664 Chemical denotes lipid MESH:D008055
71 1687-1710 Chemical denotes N-acetylneuraminic acid MESH:D019158
72 1724-1730 Chemical denotes carbon MESH:D002244
73 1740-1749 Chemical denotes galactose MESH:D005690

Test-Species-PubDictionaries

Id Subject Object Predicate Lexical cue db_id
T1 61-66 OrganismTaxon denotes mouse 10088|10090
T3 151-156 OrganismTaxon denotes mouse 10088|10090

Test-Species-PubDictionaries-PubMedBERT

Id Subject Object Predicate Lexical cue db_id
T1 61-66 Species denotes mouse 10088|10090
T3 151-156 Species denotes mouse 10088|10090
T5 260-265 Species denotes comes 2044967
T6 684-690 Species denotes microM 13150
T7 716-722 Species denotes microM 13150
T8 1227-1231 Species denotes same 582003

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 446-469 Glycan_Motif denotes N-acetylneuraminic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G50850NI
T3 879-902 Glycan_Motif denotes N-acetylneuraminic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G50850NI
T5 945-968 Glycan_Motif denotes N-acetylneuraminic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G50850NI
T7 1556-1579 Glycan_Motif denotes N-acetylneuraminic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G50850NI
T9 1687-1710 Glycan_Motif denotes N-acetylneuraminic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G50850NI
T11 1740-1749 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE

sentences

Id Subject Object Predicate Lexical cue
T1 0-84 Sentence denotes Biosynthesis in vitro of sialosylgalactosyldiacylglycerol by mouse brain microsomes.
T2 85-483 Sentence denotes A sialyltransferase enzyme, present in the microsomal fraction of mouse brain, catalyzes the synthesis in vitro of a lipid, characterized as 1,2-diacyl-3-beta-D-galactosyl (3 comes from 2 N-acetylneuraminosyl)-sn-glycerol, (sialosylgalactosyldiacylglycerol) from 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol (galactosyldiacylglycerol) and cytidine-5'-monophospho-N-acetylneuraminic acid (CMP-NeuNAc).
T3 484-617 Sentence denotes The enzymatic activity increases proportionally, over a given range, with increasing concentrations of both substrates and of enzyme.
T4 618-723 Sentence denotes The apparent Km of the enzyme for galactosyldiacylglycerol is 130 microM, and for CMP-NeuNAc, 780 microM.
T5 724-766 Sentence denotes The reaction proceeds optimally at pH 6.2.
T6 767-903 Sentence denotes The product of the enzymatic reaction was characterized as a lipid which contained galactosyldiacylglycerol and N-acetylneuraminic acid.
T7 904-1118 Sentence denotes 14C-labeled lipid, synthesized from [14C]N-acetylneuraminic acid, and 3H-labeled lipid, synthesized from [3H]galactosyldiacylglycerol, ran with identical RF values when chromatographed on thin layers of silica gel.
T8 1119-1262 Sentence denotes The water-soluble products, obtained by mild alkaline deacylation of these two labeled lipids, migrated the same when electrophoresed on paper.
T9 1263-1372 Sentence denotes The ratio 14C/3H was calculated as 0.83 for doubly labeled lipid, [14C]sialosyl-[3H]galactosyldiacylglycerol.
T10 1373-1580 Sentence denotes Degradation of this doubly labeled lipid by mild alkaline deacylation, followed by mild acid hydrolysis, yielded products that cochromatographed with standards galactosylglycerol and N-acetylneuraminic acid.
T11 1581-1750 Sentence denotes Analysis of the products resulting from periodate oxidation of the 3H-labeled lipid demonstrated that the N-acetylneuraminic acid is linked to carbon 3 of the galactose.
T1 0-84 Sentence denotes Biosynthesis in vitro of sialosylgalactosyldiacylglycerol by mouse brain microsomes.
T2 85-483 Sentence denotes A sialyltransferase enzyme, present in the microsomal fraction of mouse brain, catalyzes the synthesis in vitro of a lipid, characterized as 1,2-diacyl-3-beta-D-galactosyl (3 comes from 2 N-acetylneuraminosyl)-sn-glycerol, (sialosylgalactosyldiacylglycerol) from 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol (galactosyldiacylglycerol) and cytidine-5'-monophospho-N-acetylneuraminic acid (CMP-NeuNAc).
T3 484-617 Sentence denotes The enzymatic activity increases proportionally, over a given range, with increasing concentrations of both substrates and of enzyme.
T4 618-723 Sentence denotes The apparent Km of the enzyme for galactosyldiacylglycerol is 130 microM, and for CMP-NeuNAc, 780 microM.
T5 724-766 Sentence denotes The reaction proceeds optimally at pH 6.2.
T6 767-903 Sentence denotes The product of the enzymatic reaction was characterized as a lipid which contained galactosyldiacylglycerol and N-acetylneuraminic acid.
T7 904-1118 Sentence denotes 14C-labeled lipid, synthesized from [14C]N-acetylneuraminic acid, and 3H-labeled lipid, synthesized from [3H]galactosyldiacylglycerol, ran with identical RF values when chromatographed on thin layers of silica gel.
T8 1119-1262 Sentence denotes The water-soluble products, obtained by mild alkaline deacylation of these two labeled lipids, migrated the same when electrophoresed on paper.
T9 1263-1372 Sentence denotes The ratio 14C/3H was calculated as 0.83 for doubly labeled lipid, [14C]sialosyl-[3H]galactosyldiacylglycerol.
T10 1373-1580 Sentence denotes Degradation of this doubly labeled lipid by mild alkaline deacylation, followed by mild acid hydrolysis, yielded products that cochromatographed with standards galactosylglycerol and N-acetylneuraminic acid.
T11 1581-1750 Sentence denotes Analysis of the products resulting from periodate oxidation of the 3H-labeled lipid demonstrated that the N-acetylneuraminic acid is linked to carbon 3 of the galactose.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 67-72 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain
T2 157-162 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 446-469 https://glytoucan.org/Structures/Glycans/G50850NI denotes N-acetylneuraminic acid
T2 446-469 https://glytoucan.org/Structures/Glycans/G81533KY denotes N-acetylneuraminic acid
T3 879-902 https://glytoucan.org/Structures/Glycans/G50850NI denotes N-acetylneuraminic acid
T4 879-902 https://glytoucan.org/Structures/Glycans/G81533KY denotes N-acetylneuraminic acid
T5 945-968 https://glytoucan.org/Structures/Glycans/G50850NI denotes N-acetylneuraminic acid
T6 945-968 https://glytoucan.org/Structures/Glycans/G81533KY denotes N-acetylneuraminic acid
T7 1556-1579 https://glytoucan.org/Structures/Glycans/G50850NI denotes N-acetylneuraminic acid
T8 1556-1579 https://glytoucan.org/Structures/Glycans/G81533KY denotes N-acetylneuraminic acid
T9 1687-1710 https://glytoucan.org/Structures/Glycans/G50850NI denotes N-acetylneuraminic acid
T10 1687-1710 https://glytoucan.org/Structures/Glycans/G81533KY denotes N-acetylneuraminic acid
T11 1740-1749 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T12 1740-1749 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 67-72 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T2 157-162 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 475-481 Glycan denotes NeuNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR
T2 704-710 Glycan denotes NeuNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 475-481 Glycan denotes NeuNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR
T2 704-710 Glycan denotes NeuNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 67-72 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T2 157-162 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955

GlyCosmos15-Taxon

Id Subject Object Predicate Lexical cue db_id
T1 61-66 Organism denotes mouse 10088|10090
T3 151-156 Organism denotes mouse 10088|10090

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-84 Sentence denotes Biosynthesis in vitro of sialosylgalactosyldiacylglycerol by mouse brain microsomes.
T2 85-483 Sentence denotes A sialyltransferase enzyme, present in the microsomal fraction of mouse brain, catalyzes the synthesis in vitro of a lipid, characterized as 1,2-diacyl-3-beta-D-galactosyl (3 comes from 2 N-acetylneuraminosyl)-sn-glycerol, (sialosylgalactosyldiacylglycerol) from 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol (galactosyldiacylglycerol) and cytidine-5'-monophospho-N-acetylneuraminic acid (CMP-NeuNAc).
T3 484-617 Sentence denotes The enzymatic activity increases proportionally, over a given range, with increasing concentrations of both substrates and of enzyme.
T4 618-723 Sentence denotes The apparent Km of the enzyme for galactosyldiacylglycerol is 130 microM, and for CMP-NeuNAc, 780 microM.
T5 724-766 Sentence denotes The reaction proceeds optimally at pH 6.2.
T6 767-903 Sentence denotes The product of the enzymatic reaction was characterized as a lipid which contained galactosyldiacylglycerol and N-acetylneuraminic acid.
T7 904-1118 Sentence denotes 14C-labeled lipid, synthesized from [14C]N-acetylneuraminic acid, and 3H-labeled lipid, synthesized from [3H]galactosyldiacylglycerol, ran with identical RF values when chromatographed on thin layers of silica gel.
T8 1119-1262 Sentence denotes The water-soluble products, obtained by mild alkaline deacylation of these two labeled lipids, migrated the same when electrophoresed on paper.
T9 1263-1372 Sentence denotes The ratio 14C/3H was calculated as 0.83 for doubly labeled lipid, [14C]sialosyl-[3H]galactosyldiacylglycerol.
T10 1373-1580 Sentence denotes Degradation of this doubly labeled lipid by mild alkaline deacylation, followed by mild acid hydrolysis, yielded products that cochromatographed with standards galactosylglycerol and N-acetylneuraminic acid.
T11 1581-1750 Sentence denotes Analysis of the products resulting from periodate oxidation of the 3H-labeled lipid demonstrated that the N-acetylneuraminic acid is linked to carbon 3 of the galactose.

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 67-72 Body_part denotes brain FMA:50801
T2 73-83 Body_part denotes microsomes FMA:67438
T3 128-138 Body_part denotes microsomal FMA:67438
T4 157-162 Body_part denotes brain FMA:50801

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 67-72 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T2 157-162 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 61-66 OrganismTaxon denotes mouse 10088|10090
T3 151-156 OrganismTaxon denotes mouse 10088|10090

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 67-72 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T3 157-162 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636