PubMed:6290487
Annnotations
Test-Species-PubTator
| Id | Subject | Object | Predicate | Lexical cue | resolved_to |
|---|---|---|---|---|---|
| 1 | 90-106 | Species | denotes | Escherichia coli | 562 |
| 20 | 234-242 | Chemical | denotes | poly(dA) | MESH:C015465 |
| 21 | 247-251 | Chemical | denotes | (dT) | MESH:D013936 |
| 22 | 256-264 | Chemical | denotes | poly(dG) | MESH:C026628 |
| 23 | 269-273 | Chemical | denotes | (dC) | MESH:D003841 |
| 24 | 315-322 | Chemical | denotes | lactose | MESH:D007785 |
| 25 | 910-918 | Chemical | denotes | poly(dA) | MESH:C015465 |
| 26 | 923-927 | Chemical | denotes | (dT) | MESH:D013936 |
| 27 | 956-964 | Chemical | denotes | poly(dG) | MESH:C026628 |
| 28 | 969-973 | Chemical | denotes | (dC) | MESH:D003841 |
| 29 | 1008-1016 | Chemical | denotes | poly(dA) | MESH:C015465 |
| 30 | 1021-1025 | Chemical | denotes | (dT) | MESH:D013936 |
| 31 | 1066-1074 | Chemical | denotes | poly(dG) | MESH:C026628 |
| 32 | 1079-1083 | Chemical | denotes | (dC) | MESH:D003841 |
| 33 | 1224-1240 | Species | denotes | Escherichia coli | 562 |
| 34 | 1347-1355 | Chemical | denotes | poly(dA) | MESH:C015465 |
| 35 | 1360-1364 | Chemical | denotes | (dT) | MESH:D013936 |
| 36 | 1420-1428 | Chemical | denotes | poly(dG) | MESH:C026628 |
| 37 | 1433-1437 | Chemical | denotes | (dC) | MESH:D003841 |
Test-Species-PubDictionaries
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 90-106 | OrganismTaxon | denotes | Escherichia coli | 562 |
| T2 | 1224-1240 | OrganismTaxon | denotes | Escherichia coli | 562 |
Test-Species-PubDictionaries-PubMedBERT
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 90-106 | Species | denotes | Escherichia coli | 562 |
| T2 | 1224-1240 | Species | denotes | Escherichia coli | 562 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-124 | Sentence | denotes | Effects of neighboring DNA homopolymers on the biochemical and physical properties of the Escherichia coli lactose promoter. |
| T2 | 125-127 | Sentence | denotes | I. |
| T3 | 128-165 | Sentence | denotes | Cloning and characterization studies. |
| T4 | 166-338 | Sentence | denotes | To assess the role of neighboring DNA sequences in gene regulation, poly(dA).poly(dT) and poly(dG).poly(dC) were cloned adjacent to promoters of the lactose control region. |
| T5 | 339-680 | Sentence | denotes | Recombinant plasmids were constructed which were suitable for large scale purification of restriction fragments containing these promoters, 95-base pair (bp) AluI fragments containing the lack operator and promoter for the lac wild type and for the catabolite gene activating the protein-independent mutant, lac UV5, were cloned into pBR322. |
| T6 | 681-799 | Sentence | denotes | Homopolymers of varying lengths were inserted into the -60 region of these promoters using recombinant DNA techniques. |
| T7 | 800-1084 | Sentence | denotes | Six of the recombinant plasmids were chosen for detailed analysis: wild type (wt); wt-AT, containing 70 bp of poly(dA).poly(dT); wt-GC, containing 23 bp of poly(dG).poly(dC); UV5; UV5-AT, containing 70 bp of poly(dA).poly(dT) and finally UV5-GC, containing 43 bp of poly(dG).poly(dC). |
| T8 | 1085-1161 | Sentence | denotes | These plasmids were characterized by restriction mapping and DNA sequencing. |
| T9 | 1162-1324 | Sentence | denotes | The effects of the DNA homopolymers on the interaction of the Escherichia coli RNA polymerase with the promoters were studied using nitrocellulose filter binding. |
| T10 | 1325-1463 | Sentence | denotes | The results show that poly(dA).poly(dT) increases the level of RNA polymerase binding, whereas poly(dG).poly(dC) has no detectable effect. |
| T1 | 0-124 | Sentence | denotes | Effects of neighboring DNA homopolymers on the biochemical and physical properties of the Escherichia coli lactose promoter. |
| T2 | 125-127 | Sentence | denotes | I. |
| T3 | 128-165 | Sentence | denotes | Cloning and characterization studies. |
| T4 | 166-338 | Sentence | denotes | To assess the role of neighboring DNA sequences in gene regulation, poly(dA).poly(dT) and poly(dG).poly(dC) were cloned adjacent to promoters of the lactose control region. |
| T5 | 339-680 | Sentence | denotes | Recombinant plasmids were constructed which were suitable for large scale purification of restriction fragments containing these promoters, 95-base pair (bp) AluI fragments containing the lack operator and promoter for the lac wild type and for the catabolite gene activating the protein-independent mutant, lac UV5, were cloned into pBR322. |
| T6 | 681-799 | Sentence | denotes | Homopolymers of varying lengths were inserted into the -60 region of these promoters using recombinant DNA techniques. |
| T7 | 800-1084 | Sentence | denotes | Six of the recombinant plasmids were chosen for detailed analysis: wild type (wt); wt-AT, containing 70 bp of poly(dA).poly(dT); wt-GC, containing 23 bp of poly(dG).poly(dC); UV5; UV5-AT, containing 70 bp of poly(dA).poly(dT) and finally UV5-GC, containing 43 bp of poly(dG).poly(dC). |
| T8 | 1085-1161 | Sentence | denotes | These plasmids were characterized by restriction mapping and DNA sequencing. |
| T9 | 1162-1324 | Sentence | denotes | The effects of the DNA homopolymers on the interaction of the Escherichia coli RNA polymerase with the promoters were studied using nitrocellulose filter binding. |
| T10 | 1325-1463 | Sentence | denotes | The results show that poly(dA).poly(dT) increases the level of RNA polymerase binding, whereas poly(dG).poly(dC) has no detectable effect. |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 107-114 | Glycan | denotes | lactose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G15541SE |
| T2 | 315-322 | Glycan | denotes | lactose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G15541SE |
| T3 | 562-565 | Glycan | denotes | lac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G84224TW |
| T4 | 647-650 | Glycan | denotes | lac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G84224TW |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 107-114 | Glycan | denotes | lactose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G15541SE |
| T2 | 315-322 | Glycan | denotes | lactose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G15541SE |
GlyCosmos15-CL
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 234-238 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T3 | 243-247 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T5 | 256-260 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T7 | 265-269 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T9 | 910-914 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T11 | 919-923 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T13 | 956-960 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T15 | 965-969 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T17 | 1008-1012 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T19 | 1017-1021 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T21 | 1066-1070 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T23 | 1075-1079 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T25 | 1347-1351 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T27 | 1356-1360 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T29 | 1420-1424 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T31 | 1429-1433 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 407-412 | Body_part | denotes | scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
GlyCosmos15-Taxon
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 90-106 | Organism | denotes | Escherichia coli | 562 |
| T2 | 1224-1240 | Organism | denotes | Escherichia coli | 562 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-124 | Sentence | denotes | Effects of neighboring DNA homopolymers on the biochemical and physical properties of the Escherichia coli lactose promoter. |
| T2 | 125-165 | Sentence | denotes | I. Cloning and characterization studies. |
| T3 | 166-338 | Sentence | denotes | To assess the role of neighboring DNA sequences in gene regulation, poly(dA).poly(dT) and poly(dG).poly(dC) were cloned adjacent to promoters of the lactose control region. |
| T4 | 339-680 | Sentence | denotes | Recombinant plasmids were constructed which were suitable for large scale purification of restriction fragments containing these promoters, 95-base pair (bp) AluI fragments containing the lack operator and promoter for the lac wild type and for the catabolite gene activating the protein-independent mutant, lac UV5, were cloned into pBR322. |
| T5 | 681-799 | Sentence | denotes | Homopolymers of varying lengths were inserted into the -60 region of these promoters using recombinant DNA techniques. |
| T6 | 800-1084 | Sentence | denotes | Six of the recombinant plasmids were chosen for detailed analysis: wild type (wt); wt-AT, containing 70 bp of poly(dA).poly(dT); wt-GC, containing 23 bp of poly(dG).poly(dC); UV5; UV5-AT, containing 70 bp of poly(dA).poly(dT) and finally UV5-GC, containing 43 bp of poly(dG).poly(dC). |
| T7 | 1085-1161 | Sentence | denotes | These plasmids were characterized by restriction mapping and DNA sequencing. |
| T8 | 1162-1324 | Sentence | denotes | The effects of the DNA homopolymers on the interaction of the Escherichia coli RNA polymerase with the promoters were studied using nitrocellulose filter binding. |
| T9 | 1325-1463 | Sentence | denotes | The results show that poly(dA).poly(dT) increases the level of RNA polymerase binding, whereas poly(dG).poly(dC) has no detectable effect. |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 90-106 | OrganismTaxon | denotes | Escherichia coli | 562 |
| T2 | 1224-1240 | OrganismTaxon | denotes | Escherichia coli | 562 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 407-412 | Body_part | denotes | scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 234-238 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T3 | 243-247 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T5 | 256-260 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T7 | 265-269 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T9 | 910-914 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T11 | 919-923 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T13 | 956-960 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T15 | 965-969 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T17 | 1008-1012 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T19 | 1017-1021 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T21 | 1066-1070 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T23 | 1075-1079 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T25 | 1347-1351 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T27 | 1356-1360 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T29 | 1420-1424 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |
| T31 | 1429-1433 | Cell | denotes | poly | http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775 |