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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 811-816 Body_part denotes Blood http://purl.org/sig/ont/fma/fma9670
T2 876-886 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T3 922-927 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 811-816 Body_part denotes Blood http://purl.obolibrary.org/obo/UBERON_0000178
T2 922-927 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 59-67 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 110-134 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T3 136-144 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 310-318 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T5 397-405 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T6 841-856 Disease denotes lymphocytopenia http://purl.obolibrary.org/obo/MONDO_0003783
T7 1075-1083 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T8 1147-1155 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T9 1158-1167 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T10 1215-1223 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T11 1225-1240 Disease denotes lymphocytopenia http://purl.obolibrary.org/obo/MONDO_0003783
T12 1375-1395 Disease denotes nosocomial infection http://purl.obolibrary.org/obo/MONDO_0043544
T13 1386-1395 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T14 1451-1459 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T15 1462-1471 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 151-154 http://purl.obolibrary.org/obo/PR_000001343 denotes aim
T2 333-334 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 356-357 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T4 531-533 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T5 556-560 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T6 556-560 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T7 811-816 http://purl.obolibrary.org/obo/UBERON_0000178 denotes Blood
T8 811-816 http://www.ebi.ac.uk/efo/EFO_0000296 denotes Blood
T9 825-830 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T10 922-927 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T11 1332-1338 http://purl.obolibrary.org/obo/CLO_0001658 denotes active

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 556-560 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
2 21-29 Species denotes patients Tax:9606
3 59-67 Disease denotes COVID-19 MESH:C000657245
30 82-90 Species denotes patients Tax:9606
31 110-134 Disease denotes coronavirus disease 2019 MESH:C000657245
32 136-144 Disease denotes COVID-19 MESH:C000657245
33 236-245 Disease denotes mortality MESH:D003643
34 310-318 Disease denotes COVID-19 MESH:C000657245
35 383-391 Species denotes patients Tax:9606
36 397-405 Disease denotes COVID-19 MESH:C000657245
37 434-442 Species denotes patients Tax:9606
38 472-480 Species denotes patients Tax:9606
39 622-630 Species denotes patients Tax:9606
40 677-685 Species denotes patients Tax:9606
41 691-695 Disease denotes died MESH:D003643
42 727-732 Disease denotes fever MESH:D005334
43 745-754 Disease denotes dry cough MESH:D003371
44 775-783 Species denotes patients Tax:9606
45 841-856 Disease denotes lymphocytopenia MESH:D008231
46 1061-1069 Species denotes patients Tax:9606
47 1075-1083 Disease denotes COVID-19 MESH:C000657245
48 1130-1138 Species denotes patients Tax:9606
49 1147-1167 Disease denotes SARS-CoV-2 infection MESH:C000657245
50 1201-1209 Species denotes patients Tax:9606
51 1215-1223 Disease denotes COVID-19 MESH:C000657245
52 1225-1240 Disease denotes lymphocytopenia MESH:D008231
53 1375-1395 Disease denotes nosocomial infection MESH:D003428
54 1425-1434 Disease denotes mortality MESH:D003643
55 1451-1471 Disease denotes SARS-CoV-2 infection MESH:C000657245

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-68 Sentence denotes Clinical features of patients undergoing hemodialysis with COVID-19.
T2 69-146 Sentence denotes Hemodialysis patients are susceptible to coronavirus disease 2019 (COVID-19).
T3 147-319 Sentence denotes The aim of this study was to describe the epidemiological, clinical characteristics, and mortality-related risk factors for those who undergoing hemodialysis with COVID-19.
T4 320-355 Sentence denotes We conducted a retrospective study.
T5 356-467 Sentence denotes A total of 49 hemodialysis patients with COVID-19 (Group 1) and 74 uninfected patients (Group 2) were included.
T6 468-608 Sentence denotes For patients in Group 1, we found the median age was 62 years (36-89 years), 59.3% were male, and the median dialysis vintage was 26 months.
T7 609-696 Sentence denotes Twenty-eight patients (57%) had three or more comorbidities and two patients (4%) died.
T8 697-810 Sentence denotes The most common symptoms were fever (32.7%) and dry cough (46.9%), while nine patients (18.4%) were asymptomatic.
T9 811-1002 Sentence denotes Blood routine tests indicated lymphocytopenia, the proportion of lymphocyte subsets was generally reduced, and chest CT scans showed ground-glass opacity (45.8%) and patchy shadowing (35.4%).
T10 1003-1168 Sentence denotes However, these findings were not specific to hemodialysis patients with COVID-19, and similar manifestations could be found in patients without SARS-CoV-2 infection.
T11 1169-1472 Sentence denotes In conclusion, for hemodialysis patients with COVID-19, lymphocytopenia and ground-glass opacities or patchy opacities were common but not specific to them, early active treatment and interventions against nosocomial infection can significantly reduce the mortality and the risk of SARS-CoV-2 infection.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 727-732 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T2 745-754 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246
T3 841-856 Phenotype denotes lymphocytopenia http://purl.obolibrary.org/obo/HP_0001888
T4 1225-1240 Phenotype denotes lymphocytopenia http://purl.obolibrary.org/obo/HP_0001888