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LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 35-43 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 140-148 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 255-263 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 667-675 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T5 1485-1493 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T6 1635-1645 Disease denotes arrhythmia http://purl.obolibrary.org/obo/MONDO_0007263

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 177-182 http://purl.obolibrary.org/obo/CLO_0007225 denotes label
T2 193-194 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 211-221 http://purl.obolibrary.org/obo/BFO_0000030 denotes OBJECTIVES
T4 239-240 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 494-496 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T6 652-653 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T7 755-759 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T8 755-759 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T9 788-792 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T10 788-792 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T11 1428-1429 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 177-182 Chemical denotes label http://purl.obolibrary.org/obo/CHEBI_35209
T2 724-726 Chemical denotes SD http://purl.obolibrary.org/obo/CHEBI_74807
T3 755-759 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780
T4 788-792 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780
T5 1064-1076 Chemical denotes azithromycin http://purl.obolibrary.org/obo/CHEBI_2955
T6 1078-1080 Chemical denotes AZ http://purl.obolibrary.org/obo/CHEBI_2955
T7 1082-1087 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T8 1176-1178 Chemical denotes AZ http://purl.obolibrary.org/obo/CHEBI_2955
T9 1345-1347 Chemical denotes AZ http://purl.obolibrary.org/obo/CHEBI_2955
T10 1365-1367 Chemical denotes AZ http://purl.obolibrary.org/obo/CHEBI_2955
T11 1662-1664 Chemical denotes AZ http://purl.obolibrary.org/obo/CHEBI_2955

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
4 0-18 Chemical denotes Hydroxychloroquine MESH:D006886
5 35-43 Disease denotes COVID-19 MESH:C000657245
6 44-52 Species denotes patients Tax:9606
7 86-95 Disease denotes mortality MESH:D003643
45 111-129 Chemical denotes Hydroxychloroquine MESH:D006886
46 131-134 Chemical denotes HCQ MESH:D006886
47 140-148 Disease denotes COVID-19 MESH:C000657245
48 255-263 Disease denotes COVID-19 MESH:C000657245
49 264-271 Species denotes patient Tax:9606
50 346-349 Chemical denotes HCQ MESH:D006886
51 389-398 Disease denotes mortality MESH:D003643
52 464-472 Species denotes patients Tax:9606
53 483-486 Chemical denotes HCQ MESH:D006886
54 638-646 Species denotes patients Tax:9606
55 667-675 Disease denotes COVID-19 MESH:C000657245
56 801-804 Chemical denotes HCQ MESH:D006886
57 812-815 Chemical denotes HCQ MESH:D006886
58 880-889 Disease denotes mortality MESH:D003643
59 902-905 Chemical denotes HCQ MESH:D006886
60 913-916 Chemical denotes HCQ MESH:D006886
61 925-928 Chemical denotes HCQ MESH:D006886
62 946-949 Chemical denotes HCQ MESH:D006886
63 1060-1063 Chemical denotes HCQ MESH:D006886
64 1064-1076 Chemical denotes azithromycin MESH:D017963
65 1078-1080 Chemical denotes AZ
66 1103-1112 Disease denotes mortality MESH:D003643
67 1171-1174 Chemical denotes HCQ MESH:D006886
68 1176-1178 Chemical denotes AZ
69 1305-1314 Disease denotes mortality MESH:D003643
70 1341-1344 Chemical denotes HCQ MESH:D006886
71 1358-1361 Chemical denotes HCQ MESH:D006886
72 1485-1493 Disease denotes COVID-19 MESH:C000657245
73 1508-1511 Chemical denotes HCQ MESH:D006886
74 1524-1533 Disease denotes mortality MESH:D003643
75 1550-1558 Species denotes patients Tax:9606
76 1611-1620 Disease denotes mortality MESH:D003643
77 1625-1634 Disease denotes mortality MESH:D003643
78 1635-1645 Disease denotes arrhythmia MESH:D001145
79 1651-1654 Chemical denotes HCQ MESH:D006886
80 1658-1661 Chemical denotes HCQ MESH:D006886
81 1662-1664 Chemical denotes AZ

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-53 Sentence denotes Hydroxychloroquine in hospitalized COVID-19 patients:
T2 54-96 Sentence denotes Real world experience assessing mortality.
T3 97-110 Sentence denotes INTRODUCTION:
T4 111-210 Sentence denotes Hydroxychloroquine (HCQ) for COVID-19 is presently being used off-label or within a clinical trial.
T5 211-222 Sentence denotes OBJECTIVES:
T6 223-354 Sentence denotes We investigated a multinational COVID-19 patient database of real world data containing outcomes and their relationship to HCQ use.
T7 355-424 Sentence denotes The primary outcome was all-cause mortality within 30 days follow-up.
T8 425-433 Sentence denotes METHODS:
T9 434-525 Sentence denotes Retrospective cohort study of patients receiving HCQ within 48 hours of hospital admission.
T10 526-622 Sentence denotes Medications, preexisting conditions, clinical measures on admission, and outcomes were recorded.
T11 623-631 Sentence denotes RESULTS:
T12 632-837 Sentence denotes Among patients with a diagnosis of COVID-19 in our propensity matched cohort, the mean ages±SD were 62.3±15.9 years (53.7% male) and 61.9±16.0 years (53.0% male) in the HCQ and no-HCQ groups, respectively.
T13 838-1017 Sentence denotes There was no difference in overall 30-day mortality between the HCQ and no-HCQ groups (HCQ 13.1%, n=367; No-HCQ 13.6%, n=367; OR 0.95; 95% CI 0.62-1.46) after propensity-matching.
T14 1018-1238 Sentence denotes Although statistically insignificant, the HCQ/azithromycin (AZ) group had an overall mortality rate of 14.6% (n=199) compared with propensity matched no HCQ/+AZ cohort's rate of 12.1% (n=199) (OR 1.24; 95% CI 0.70-2.22).
T15 1239-1399 Sentence denotes Importantly, however, there was no trend in this cohort's overall mortality/arrhythmogenesis outcome (HCQ/AZ 17.1%, No-HCQ/No AZ 17.1%; OR 1.0; 95% CI 0.6-1.7).
T16 1400-1412 Sentence denotes CONCLUSIONS:
T17 1413-1559 Sentence denotes We report from a large retrospective multinational database analysis of COVID-19 outcomes with HCQ and overall mortality in hospitalized patients.
T18 1560-1665 Sentence denotes There was no statistically significant increase in mortality and mortality/arrhythmia with HCQ or HCQ/AZ.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 1635-1645 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675

hydroxychloroquine

Id Subject Object Predicate Lexical cue hp_id
T1 1635-1645 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675