PubMed:32970989 / 67-235
Annnotations
LitCovid-PD-FMA-UBERON
{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T3","span":{"begin":30,"end":37},"obj":"Body_part"},{"id":"T4","span":{"begin":67,"end":82},"obj":"Body_part"}],"attributes":[{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma63023"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
LitCovid-PD-MONDO
{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T3","span":{"begin":13,"end":21},"obj":"Disease"}],"attributes":[{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
LitCovid-PD-CHEBI
{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T2","span":{"begin":30,"end":37},"obj":"Chemical"},{"id":"T3","span":{"begin":67,"end":82},"obj":"Chemical"},{"id":"T4","span":{"begin":67,"end":74},"obj":"Chemical"},{"id":"T5","span":{"begin":75,"end":82},"obj":"Chemical"},{"id":"T6","span":{"begin":87,"end":98},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A3","pred":"chebi_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CHEBI_28815"},{"id":"A4","pred":"chebi_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_24500"},{"id":"A5","pred":"chebi_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_16189"},{"id":"A6","pred":"chebi_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_48433"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
LitCovid-PD-GlycoEpitope
{"project":"LitCovid-PD-GlycoEpitope","denotations":[{"id":"T2","span":{"begin":67,"end":82},"obj":"GlycoEpitope"}],"attributes":[{"id":"A2","pred":"glyco_epitope_db_id","subj":"T2","obj":"http://www.glycoepitope.jp/epitopes/EP0086"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T2","span":{"begin":0,"end":168},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"37","span":{"begin":13,"end":23},"obj":"Species"},{"id":"38","span":{"begin":24,"end":29},"obj":"Gene"},{"id":"39","span":{"begin":67,"end":82},"obj":"Chemical"},{"id":"40","span":{"begin":87,"end":118},"obj":"Gene"},{"id":"41","span":{"begin":120,"end":124},"obj":"Gene"}],"attributes":[{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"Tax:2697049"},{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"Gene:43740568"},{"id":"A39","pred":"tao:has_database_id","subj":"39","obj":"MESH:D006497"},{"id":"A40","pred":"tao:has_database_id","subj":"40","obj":"Gene:59272"},{"id":"A41","pred":"tao:has_database_id","subj":"41","obj":"Gene:59272"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
Covid19_manual_annotation_v2
{"project":"Covid19_manual_annotation_v2","denotations":[{"id":"37","span":{"begin":13,"end":23},"obj":"Species"},{"id":"38","span":{"begin":24,"end":29},"obj":"Gene"},{"id":"39","span":{"begin":67,"end":82},"obj":"Glycan"},{"id":"40","span":{"begin":87,"end":118},"obj":"Gene"},{"id":"41","span":{"begin":120,"end":124},"obj":"Gene"},{"id":"T14","span":{"begin":138,"end":161},"obj":"Phenomena"},{"id":"T17","span":{"begin":38,"end":47},"obj":"Phenomena"},{"id":"T18","span":{"begin":58,"end":66},"obj":"Anatomy"},{"id":"T19","span":{"begin":163,"end":166},"obj":"Phenomena"},{"id":"T50","span":{"begin":38,"end":47},"obj":"Phenomena"}],"relations":[{"id":"R1","pred":"abbreviation","subj":"41","obj":"40"},{"id":"R11","pred":"of_a","subj":"T18","obj":"39"},{"id":"R2","pred":"abbreviation","subj":"T19","obj":"T14"},{"id":"R60","pred":"to","subj":"T17","obj":"39"},{"id":"R7","pred":"of_a","subj":"37","obj":"38"},{"id":"R79","pred":"of_a","subj":"38","obj":"T14"},{"id":"R8","pred":"is_a","subj":"38","obj":"T17"},{"id":"R81","pred":"to","subj":"T50","obj":"40"},{"id":"R82","pred":"is_a","subj":"38","obj":"T50"}],"attributes":[{"id":"A84","pred":"Memo","subj":"T19","obj":"MESH:D000072417"},{"id":"A83","pred":"Memo","subj":"T14","obj":"MESH:D000072417"},{"id":"A99","pred":"Memo","subj":"T50","obj":"MESH:D053585"},{"id":"A82","pred":"tao:has_database_id","subj":"T17","obj":"MESH:D000076662"},{"id":"A39","pred":"tao:has_database_id","subj":"39","obj":"MESH:D006497"},{"id":"A40","pred":"tao:has_database_id","subj":"40","obj":"Gene:59272"},{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"Tax:2697049"},{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"Gene:43740568"},{"id":"A41","pred":"tao:has_database_id","subj":"41","obj":"Gene:59272"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"BioProject","uri":"https://www.ncbi.nlm.nih.gov/bioproject/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"},{"prefix":"HP","uri":"https://hpo.jax.org/app/browse/term/HP:"},{"prefix":"BioSample","uri":"https://www.ncbi.nlm.nih.gov/biosample/"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
Zoonoses
{"project":"Zoonoses","denotations":[{"id":"37","span":{"begin":13,"end":23},"obj":"Species"},{"id":"38","span":{"begin":24,"end":29},"obj":"Gene"},{"id":"39","span":{"begin":67,"end":82},"obj":"Glycan"},{"id":"40","span":{"begin":87,"end":118},"obj":"Gene"},{"id":"41","span":{"begin":120,"end":124},"obj":"Gene"},{"id":"T14","span":{"begin":138,"end":161},"obj":"Phenomena"},{"id":"T17","span":{"begin":38,"end":47},"obj":"Phenomena"},{"id":"T18","span":{"begin":58,"end":66},"obj":"Anatomy"},{"id":"T19","span":{"begin":163,"end":166},"obj":"Phenomena"},{"id":"T50","span":{"begin":38,"end":47},"obj":"Phenomena"}],"relations":[{"id":"R60","pred":"to","subj":"T17","obj":"39"},{"id":"R7","pred":"of_a","subj":"37","obj":"38"},{"id":"R79","pred":"of_a","subj":"38","obj":"T14"},{"id":"R8","pred":"is_a","subj":"38","obj":"T17"},{"id":"R81","pred":"to","subj":"T50","obj":"40"},{"id":"R82","pred":"is_a","subj":"38","obj":"T50"},{"id":"R1","pred":"abbreviation","subj":"41","obj":"40"},{"id":"R11","pred":"of_a","subj":"T18","obj":"39"},{"id":"R2","pred":"abbreviation","subj":"T19","obj":"T14"}],"attributes":[{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"Tax:2697049"},{"id":"A99","pred":"Memo","subj":"T50","obj":"MESH:D053585"},{"id":"A82","pred":"tao:has_database_id","subj":"T17","obj":"MESH:D054884"},{"id":"A83","pred":"Memo","subj":"T14","obj":"MESH:D000072417"},{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"Gene:43740568"},{"id":"A40","pred":"tao:has_database_id","subj":"40","obj":"Gene:59272"},{"id":"A39","pred":"tao:has_database_id","subj":"39","obj":"MESH:D006497"},{"id":"A84","pred":"Memo","subj":"T19","obj":"MESH:D000072417"},{"id":"A41","pred":"tao:has_database_id","subj":"41","obj":"Gene:59272"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
Inflammaging
{"project":"Inflammaging","denotations":[{"id":"T2","span":{"begin":0,"end":168},"obj":"Sentence"},{"id":"T2","span":{"begin":0,"end":168},"obj":"Sentence"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
Covid19_manual_annotation
{"project":"Covid19_manual_annotation","denotations":[{"id":"37","span":{"begin":13,"end":23},"obj":"Species"},{"id":"38","span":{"begin":24,"end":29},"obj":"Gene"},{"id":"39","span":{"begin":67,"end":82},"obj":"Biological"},{"id":"40","span":{"begin":87,"end":118},"obj":"Gene"},{"id":"41","span":{"begin":120,"end":124},"obj":"Gene"},{"id":"T14","span":{"begin":138,"end":161},"obj":"Target"},{"id":"T17","span":{"begin":38,"end":47},"obj":"Interact"},{"id":"T18","span":{"begin":58,"end":66},"obj":"Biological"},{"id":"T19","span":{"begin":163,"end":166},"obj":"Target"}],"relations":[{"id":"R24","pred":"of_a","subj":"T18","obj":"39"},{"id":"R25","pred":"of_a","subj":"37","obj":"38"},{"id":"R26","pred":"is_a","subj":"38","obj":"T17"},{"id":"R27","pred":"with","subj":"T17","obj":"39"},{"id":"R28","pred":"with","subj":"T17","obj":"40"},{"id":"R29","pred":"abbreviation","subj":"41","obj":"40"},{"id":"R30","pred":"abbreviation","subj":"T19","obj":"T14"},{"id":"R31","pred":"of_a","subj":"38","obj":"T14"},{"id":"R32","pred":"via","subj":"T14","obj":"T17"}],"attributes":[{"id":"A40","pred":"tao:has_database_id","subj":"40","obj":"Gene:59272"},{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"Tax:2697049"},{"id":"A39","pred":"tao:has_database_id","subj":"39","obj":"MESH:D006497"},{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"Gene:43740568"},{"id":"A41","pred":"tao:has_database_id","subj":"41","obj":"Gene:59272"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
GlyCosmos15-HP
{"project":"GlyCosmos15-HP","denotations":[{"id":"T1","span":{"begin":163,"end":166},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"HP:5200291"}],"namespaces":[{"prefix":"HP","uri":"http://purl.obolibrary.org/obo/HP_"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
mondo_disease
{"project":"mondo_disease","denotations":[{"id":"T3","span":{"begin":13,"end":23},"obj":"Disease"}],"attributes":[{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
NCBITAXON
{"project":"NCBITAXON","denotations":[{"id":"T2","span":{"begin":13,"end":21},"obj":"OrganismTaxon"}],"attributes":[{"id":"A2","pred":"db_id","subj":"T2","obj":"694009"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}
Glycosmos15-GlycoEpitope
{"project":"Glycosmos15-GlycoEpitope","denotations":[{"id":"T2","span":{"begin":67,"end":82},"obj":"http://purl.jp/bio/12/glyco/glycan#Glycan_epitope"}],"attributes":[{"id":"A2","pred":"glycoepitope_id","subj":"T2","obj":"http://www.glycoepitope.jp/epitopes/EP0086"}],"text":"We show that SARS-CoV-2 spike protein interacts with both cellular heparan sulfate and angiotensin-converting enzyme 2 (ACE2) through its receptor-binding domain (RBD)."}