PubMed:32921678
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 177-183 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 177-183 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 94-102 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T2 | 130-142 | Disease | denotes | hypertension | http://purl.obolibrary.org/obo/MONDO_0005044 |
| T3 | 144-163 | Disease | denotes | Alzheimer's disease | http://purl.obolibrary.org/obo/MONDO_0004975 |
| T4 | 169-191 | Disease | denotes | chronic kidney disease | http://purl.obolibrary.org/obo/MONDO_0005300 |
| T5 | 177-191 | Disease | denotes | kidney disease | http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240 |
| T7 | 236-261 | Disease | denotes | corona virus disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T8 | 263-271 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T9 | 484-491 | Disease | denotes | malaria | http://purl.obolibrary.org/obo/MONDO_0005136 |
| T10 | 496-515 | Disease | denotes | autoimmune diseases | http://purl.obolibrary.org/obo/MONDO_0007179 |
| T11 | 538-546 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T12 | 639-647 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T13 | 813-836 | Disease | denotes | cardiovascular diseases | http://purl.obolibrary.org/obo/MONDO_0004995 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 79-80 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T2 | 177-183 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T3 | 177-183 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
| T4 | 177-183 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
| T5 | 243-248 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1 | 236-242 | Chemical | denotes | corona | http://purl.obolibrary.org/obo/CHEBI_37409 |
| T2 | 432-450 | Chemical | denotes | hydroxychloroquine | http://purl.obolibrary.org/obo/CHEBI_5801 |
| T3 | 465-469 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
| T4 | 757-771 | Chemical | denotes | antiviral drug | http://purl.obolibrary.org/obo/CHEBI_36044 |
| T5 | 757-766 | Chemical | denotes | antiviral | http://purl.obolibrary.org/obo/CHEBI_22587 |
| T6 | 767-771 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-103 | Sentence | denotes | Suspected Hydroxychloroquine-Induced Sinus Bradycardia and QTc Prolongation in a Patient with COVID-19. |
| T2 | 104-273 | Sentence | denotes | An 84-year-old woman with hypertension, Alzheimer's disease, and chronic kidney disease presented with fever and was diagnosed with corona virus disease 2019 (COVID-19). |
| T3 | 274-547 | Sentence | denotes | During the hospitalization, she experienced unexpected sinus bradycardia with prolonged QTc, which was thought to be closely related to the short-term use of hydroxychloroquine (HCQ), an old drug used to treat malaria and autoimmune diseases, but now used against COVID-19. |
| T4 | 548-629 | Sentence | denotes | The cardiac side effects of HCQ were rare, seen with short-term and low-dose use. |
| T5 | 630-837 | Sentence | denotes | With the COVID-19 pandemic, this case alerts clinicians to be aware of the arrhythmogenic effects of HCQ when it is used as an antiviral drug, especially in patients with preexisting cardiovascular diseases. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 4 | 10-28 | Chemical | denotes | Hydroxychloroquine | MESH:D006886 |
| 5 | 37-75 | Disease | denotes | Sinus Bradycardia and QTc Prolongation | MESH:D012804 |
| 6 | 81-88 | Species | denotes | Patient | Tax:9606 |
| 7 | 94-102 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 26 | 119-124 | Species | denotes | woman | Tax:9606 |
| 27 | 130-142 | Disease | denotes | hypertension | MESH:D006973 |
| 28 | 144-163 | Disease | denotes | Alzheimer's disease | MESH:D000544 |
| 29 | 169-191 | Disease | denotes | chronic kidney disease | MESH:D051436 |
| 30 | 207-212 | Disease | denotes | fever | MESH:D005334 |
| 31 | 236-261 | Disease | denotes | corona virus disease 2019 | MESH:C000657245 |
| 32 | 263-271 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 33 | 329-346 | Disease | denotes | sinus bradycardia | MESH:D012804 |
| 34 | 432-450 | Chemical | denotes | hydroxychloroquine | MESH:D006886 |
| 35 | 452-455 | Chemical | denotes | HCQ | MESH:D006886 |
| 36 | 484-491 | Disease | denotes | malaria | MESH:D008288 |
| 37 | 496-515 | Disease | denotes | autoimmune diseases | MESH:D001327 |
| 38 | 538-546 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 39 | 576-579 | Chemical | denotes | HCQ | MESH:D006886 |
| 40 | 639-647 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 41 | 731-734 | Chemical | denotes | HCQ | MESH:D006886 |
| 42 | 787-795 | Species | denotes | patients | Tax:9606 |
| 43 | 813-836 | Disease | denotes | cardiovascular diseases | MESH:D002318 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 37-54 | Phenotype | denotes | Sinus Bradycardia | http://purl.obolibrary.org/obo/HP_0001688 |
| T2 | 130-142 | Phenotype | denotes | hypertension | http://purl.obolibrary.org/obo/HP_0000822 |
| T3 | 144-163 | Phenotype | denotes | Alzheimer's disease | http://purl.obolibrary.org/obo/HP_0002511 |
| T4 | 169-191 | Phenotype | denotes | chronic kidney disease | http://purl.obolibrary.org/obo/HP_0012622 |
| T5 | 207-212 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T6 | 329-346 | Phenotype | denotes | sinus bradycardia | http://purl.obolibrary.org/obo/HP_0001688 |
| T7 | 496-515 | Phenotype | denotes | autoimmune diseases | http://purl.obolibrary.org/obo/HP_0002960 |
| T8 | 813-836 | Phenotype | denotes | cardiovascular diseases | http://purl.obolibrary.org/obo/HP_0001626 |
hydroxychloroquine
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 37-54 | Phenotype | denotes | Sinus Bradycardia | http://purl.obolibrary.org/obo/HP_0001688 |
| T2 | 130-142 | Phenotype | denotes | hypertension | http://purl.obolibrary.org/obo/HP_0000822 |
| T3 | 144-163 | Phenotype | denotes | Alzheimer's disease | http://purl.obolibrary.org/obo/HP_0002511 |
| T4 | 169-191 | Phenotype | denotes | chronic kidney disease | http://purl.obolibrary.org/obo/HP_0012622 |
| T5 | 207-212 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T6 | 329-346 | Phenotype | denotes | sinus bradycardia | http://purl.obolibrary.org/obo/HP_0001688 |
| T7 | 496-515 | Phenotype | denotes | autoimmune diseases | http://purl.obolibrary.org/obo/HP_0002960 |
| T8 | 813-836 | Phenotype | denotes | cardiovascular diseases | http://purl.obolibrary.org/obo/HP_0001626 |
LitCovid_AGAC_only
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| p168744s10 | 144-163 | Disease | denotes | Alzheimer's disease |