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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 257-260 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T2 1285-1295 Body_part denotes troponin I http://purl.org/sig/ont/fma/fma62340
T3 1285-1293 Body_part denotes troponin http://purl.org/sig/ont/fma/fma62338

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 11-17 Disease denotes Injury http://purl.obolibrary.org/obo/MONDO_0021178
T2 98-106 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 209-217 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 231-239 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T5 298-317 Disease denotes respiratory disease http://purl.obolibrary.org/obo/MONDO_0005087
T6 327-335 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 346-354 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T8 374-391 Disease denotes pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005275
T9 518-524 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T10 614-622 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T11 750-756 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T12 834-842 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T13 1453-1461 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T14 1464-1473 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T15 1572-1578 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T16 1597-1605 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T17 1606-1615 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T18 1689-1697 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T19 1700-1709 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 178-179 http://purl.obolibrary.org/obo/CLO_0001020 denotes à
T2 261-266 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T3 283-284 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 372-373 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 455-456 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 1019-1020 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T7 1312-1313 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T8 1331-1338 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T9 1360-1362 http://purl.obolibrary.org/obo/PR_000010213 denotes MB
T10 1774-1778 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 1331-1338 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T2 1344-1352 Chemical denotes creatine http://purl.obolibrary.org/obo/CHEBI_16919|http://purl.obolibrary.org/obo/CHEBI_57947

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 479-488 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
4 0-17 Disease denotes Myocardial Injury MESH:D009202
5 71-80 Disease denotes Mortality MESH:D003643
6 84-92 Species denotes Patients Tax:9606
7 98-106 Disease denotes COVID-19 MESH:C000657245
33 231-241 Species denotes SARS-CoV-2 Tax:2697049
34 292-317 Disease denotes acute respiratory disease MESH:D012120
35 327-335 Disease denotes COVID-19 MESH:C000657245
36 346-354 Disease denotes COVID-19 MESH:C000657245
37 374-391 Disease denotes pulmonary disease MESH:D008171
38 398-406 Species denotes patients Tax:9606
39 419-440 Disease denotes cardiovascular damage MESH:D002318
40 507-524 Disease denotes myocardial injury MESH:D009202
41 541-562 Disease denotes cardiac complications MESH:D005117
42 591-596 Disease denotes death MESH:D003643
43 600-608 Species denotes patients Tax:9606
44 614-622 Disease denotes COVID-19 MESH:C000657245
45 739-756 Disease denotes myocardial injury MESH:D009202
46 773-794 Disease denotes cardiac complications MESH:D005117
47 834-842 Disease denotes COVID-19 MESH:C000657245
48 1133-1141 Species denotes patients Tax:9606
49 1368-1389 Disease denotes cardiac complications MESH:D005117
50 1429-1434 Disease denotes death MESH:D003643
51 1439-1447 Species denotes patients Tax:9606
52 1453-1473 Disease denotes SARS-CoV-2 infection MESH:C000657245
53 1561-1578 Disease denotes myocardial injury MESH:D009202
54 1597-1605 Disease denotes COVID-19 MESH:C000657245
55 1606-1615 Disease denotes infection MESH:D007239
56 1676-1685 Disease denotes mortality MESH:D003643
57 1689-1709 Disease denotes SARS-CoV-2 infection MESH:C000657245

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-107 Sentence denotes Myocardial Injury Biomarkers and Cardiac Complications Associated with Mortality in Patients with COVID-19.
T2 108-218 Sentence denotes Biomarcadores de Lesão Miocárdica e Complicações Cardíacas Associadas à Mortalidade em Pacientes com COVID-19.
T3 219-336 Sentence denotes BACKGROUND: SARS-CoV-2 is an emerging RNA virus associated with a severe acute respiratory disease known as COVID-19.
T4 337-441 Sentence denotes Although COVID-19 is predominantly a pulmonary disease, some patients have severe cardiovascular damage.
T5 442-623 Sentence denotes We performed a quantitative evidence synthesis of clinical data, myocardial injury biomarkers, and cardiac complications associated with in-hospital death in patients with COVID-19.
T6 624-632 Sentence denotes METHODS:
T7 633-843 Sentence denotes We searched the databases PubMed, Embase, and Google Scholar to identify studies comparing clinical data, myocardial injury biomarkers, and cardiac complications between non-survivors and survivors of COVID-19.
T8 844-1018 Sentence denotes Effect sizes were reported as mean difference or standardized mean difference for continuous variables and risk ratio for dichotomous variables with 95% confidence intervals.
T9 1019-1071 Sentence denotes A random effects model was used to pool the results.
T10 1072-1080 Sentence denotes RESULTS:
T11 1081-1194 Sentence denotes Six retrospective studies reporting data from 1,141 patients (832 survivors and 309 non-survivors) were included.
T12 1195-1474 Sentence denotes We found that underlying cardiovascular conditions; elevation of high-sensitivity cardiac troponin I, N-terminal pro-B-type natriuretic peptide, and creatine kinase-MB; and cardiac complications were associated with increased risk of death for patients with SARS-CoV-2 infection.
T13 1475-1487 Sentence denotes CONCLUSIONS:
T14 1488-1821 Sentence denotes The confirmation that underlying cardiovascular conditions, elevation of myocardial injury biomarkers during COVID-19 infection, and acute cardiovascular decompensation are predictors for mortality in SARS-CoV-2 infection must encourage new research to clarify potential mechanisms and test appropriate treatments. (Arq Bras Cardiol.
T15 1822-1844 Sentence denotes 2020; 115(2):273-277).

ENG_RE_CONSENSUS

Id Subject Object Predicate Lexical cue
T0 257-260 CHEBI_33697 denotes RNA
T1 285-291 HP_0012828 denotes severe
T2 292-297 HP_0011009 denotes acute
T17 298-317 HP_0002795 denotes respiratory disease
T16 298-317 DOID_1579 denotes respiratory disease
T18 327-335 HP_0033141 denotes COVID-19
T4 327-335 DOID_0080600 denotes COVID-19
T19 346-354 HP_0033141 denotes COVID-19
T5 346-354 DOID_0080600 denotes COVID-19
T21 374-391 HP_0002795 denotes pulmonary disease
T20 374-391 DOID_850 denotes pulmonary disease
T7 412-418 HP_0012828 denotes severe
T22 419-440 HP_0001626 denotes cardiovascular damage
T23 507-524 HP_0001637 denotes myocardial injury
T24 614-622 HP_0033141 denotes COVID-19
T9 614-622 DOID_0080600 denotes COVID-19
T27 834-842 HP_0033141 denotes COVID-19
T10 834-842 DOID_0080600 denotes COVID-19
T25 1319-1338 CHEBI_80233 denotes natriuretic peptide
T11 1344-1352 CHEBI_16919 denotes creatine
T26 1453-1473 HP_0033141 denotes SARS-CoV-2 infection
T12 1453-1473 DOID_0080600 denotes SARS-CoV-2 infection
T28 1597-1605 HP_0033141 denotes COVID-19
T13 1597-1605 DOID_0080600 denotes COVID-19
T14 1621-1626 HP_0011009 denotes acute
T30 1627-1656 HP_0030872 denotes cardiovascular decompensation
T29 1689-1709 HP_0033141 denotes SARS-CoV-2 infection
T15 1689-1709 DOID_0080600 denotes SARS-CoV-2 infection
R11 T9 T0 effect COVID-19,RNA
R14 T12 T11 effect SARS-CoV-2 infection,creatine
R16 T13 T11 no_relation COVID-19,creatine
R18 T15 T11 effect SARS-CoV-2 infection,creatine
R7 T5 T0 no_relation COVID-19,RNA
R5 T4 T0 no_relation COVID-19,RNA
R19 T2 T17 effect acute,respiratory disease
R20 T1 T17 effect severe,respiratory disease
R21 T1 T16 effect severe,respiratory disease
R22 T2 T16 effect acute,respiratory disease
R23 T7 T22 effect severe,cardiovascular damage
R24 T19 T22 effect COVID-19,cardiovascular damage
R25 T5 T22 effect COVID-19,cardiovascular damage
R26 T18 T22 effect COVID-19,cardiovascular damage
R27 T4 T22 effect COVID-19,cardiovascular damage
R28 T24 T23 effect COVID-19,myocardial injury
R29 T9 T23 effect COVID-19,myocardial injury
R30 T26 T11 effect SARS-CoV-2 infection,creatine
R31 T29 T11 effect SARS-CoV-2 infection,creatine
R32 T28 T11 effect COVID-19,creatine
R33 T13 T25 effect COVID-19,natriuretic peptide
R34 T28 T25 effect COVID-19,natriuretic peptide
R35 T12 T25 effect SARS-CoV-2 infection,natriuretic peptide
R36 T26 T15 effect SARS-CoV-2 infection,SARS-CoV-2 infection
R37 T29 T25 effect SARS-CoV-2 infection,natriuretic peptide
R38 T28 T30 effect COVID-19,cardiovascular decompensation
R39 T13 T30 effect COVID-19,cardiovascular decompensation
R40 T14 T30 effect acute,cardiovascular decompensation

ENG_NER_NEL_CONSENSUS

Id Subject Object Predicate Lexical cue
T70 1285-1295 MESH:D019210 denotes troponin I
T72 1319-1338 CHEBI:80233 denotes natriuretic peptide
T73 1453-1473 HP:0033141 denotes SARS-CoV-2 infection
T74 327-335 MESH:D000086382 denotes COVID-19
T75 614-622 MESH:D000086382 denotes COVID-19
T76 834-842 MESH:D000086382 denotes COVID-19
T77 834-842 HP:0033141 denotes COVID-19
T78 1453-1473 MESH:D000086382 denotes SARS-CoV-2 infection
T79 1597-1605 MESH:D000086382 denotes COVID-19
T80 1597-1605 HP:0033141 denotes COVID-19
T81 1368-1389 MESH:D018376 denotes cardiac complications
T82 1521-1546 MESH:D018376 denotes cardiovascular conditions
T83 1689-1709 HP:0033141 denotes SARS-CoV-2 infection
T84 1689-1709 MESH:D000086382 denotes SARS-CoV-2 infection
T85 1627-1656 HP:0030872 denotes cardiovascular decompensation
T86 285-317 MESH:D045169 denotes severe acute respiratory disease
T87 346-354 MESH:D000086382 denotes COVID-19
T88 997-1018 MESH:D016001 denotes confidence intervals.
T89 951-955 MESH:D012306 denotes risk
T10 346-354 DOID:0080600 denotes COVID-19
T14 398-406 MESH:D010361 denotes patients
T15 412-418 HP:0012828 denotes severe
T17 525-535 MESH:D015415 denotes biomarkers
T19 591-596 MESH:D003643 denotes death
T20 600-608 MESH:D010361 denotes patients
T21 614-622 DOID:0080600 denotes COVID-19
T23 757-767 MESH:D015415 denotes biomarkers
T24 821-830 MESH:D017741 denotes survivors
T25 834-842 DOID:0080600 denotes COVID-19
T3 257-266 MESH:D012328 denotes RNA virus
T30 1085-1106 MESH:D012189 denotes retrospective studies
T31 1133-1141 MESH:D010361 denotes patients
T32 1147-1156 MESH:D017741 denotes survivors
T34 1344-1352 CHEBI:16919 denotes creatine
T35 1344-1352 MESH:D003401 denotes creatine
T37 1421-1425 MESH:D012306 denotes risk
T39 1429-1434 MESH:D003643 denotes death
T4 285-291 HP:0012828 denotes severe
T40 1439-1447 MESH:D010361 denotes patients
T42 1453-1473 DOID:0080600 denotes SARS-CoV-2 infection
T44 1579-1589 MESH:D015415 denotes biomarkers
T45 1597-1605 DOID:0080600 denotes COVID-19
T48 1621-1626 HP:0011009 denotes acute
T49 1676-1685 MESH:D009026 denotes mortality
T5 292-297 HP:0011009 denotes acute
T51 1689-1709 DOID:0080600 denotes SARS-CoV-2 infection
T53 1729-1737 MESH:D012106 denotes research
T54 257-260 CHEBI:33697 denotes RNA
T55 231-241 MESH:D000086402 denotes SARS-CoV-2
T58 298-317 DOID:1579 denotes respiratory disease
T59 327-335 DOID:0080600 denotes COVID-19
T61 298-317 HP:0002795 denotes respiratory disease
T62 327-335 HP:0033141 denotes COVID-19
T63 346-354 HP:0033141 denotes COVID-19
T64 374-391 DOID:850 denotes pulmonary disease
T65 374-391 HP:0002795 denotes pulmonary disease
T66 374-391 MESH:D008171 denotes pulmonary disease
T67 419-440 HP:0001626 denotes cardiovascular damage
T68 507-524 HP:0001637 denotes myocardial injury
T69 614-622 HP:0033141 denotes COVID-19