PubMed:32744052 / 889-1102
Annnotations
LitCovid-OGER-BB
{"project":"LitCovid-OGER-BB","denotations":[{"id":"T18","span":{"begin":14,"end":25},"obj":"CL:0000235"},{"id":"T19","span":{"begin":29,"end":40},"obj":"NCBITaxon:11118"},{"id":"T20","span":{"begin":125,"end":136},"obj":"GO:0006508"},{"id":"T21","span":{"begin":160,"end":167},"obj":"UBERON:0010210"},{"id":"T22","span":{"begin":160,"end":177},"obj":"GO:0007596"}],"namespaces":[{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"}],"text":"Activation of macrophages by coronavirus-19 leads to the release of pro-inflammatory cytokines, metalloproteinases and other proteolytic enzymes that can cause thrombi formation and severe respiratory dysfunction."}
LitCovid-PD-FMA-UBERON
{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T14","span":{"begin":14,"end":25},"obj":"Body_part"},{"id":"T15","span":{"begin":85,"end":94},"obj":"Body_part"}],"attributes":[{"id":"A14","pred":"fma_id","subj":"T14","obj":"http://purl.org/sig/ont/fma/fma63261"},{"id":"A15","pred":"fma_id","subj":"T15","obj":"http://purl.org/sig/ont/fma/fma84050"}],"text":"Activation of macrophages by coronavirus-19 leads to the release of pro-inflammatory cytokines, metalloproteinases and other proteolytic enzymes that can cause thrombi formation and severe respiratory dysfunction."}
LitCovid-PD-CLO
{"project":"LitCovid-PD-CLO","denotations":[{"id":"T11","span":{"begin":0,"end":10},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"}],"text":"Activation of macrophages by coronavirus-19 leads to the release of pro-inflammatory cytokines, metalloproteinases and other proteolytic enzymes that can cause thrombi formation and severe respiratory dysfunction."}
LitCovid-PD-GO-BP
{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T5","span":{"begin":168,"end":177},"obj":"http://purl.obolibrary.org/obo/GO_0009058"}],"text":"Activation of macrophages by coronavirus-19 leads to the release of pro-inflammatory cytokines, metalloproteinases and other proteolytic enzymes that can cause thrombi formation and severe respiratory dysfunction."}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T7","span":{"begin":0,"end":213},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Activation of macrophages by coronavirus-19 leads to the release of pro-inflammatory cytokines, metalloproteinases and other proteolytic enzymes that can cause thrombi formation and severe respiratory dysfunction."}
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"100","span":{"begin":29,"end":43},"obj":"Species"},{"id":"101","span":{"begin":189,"end":212},"obj":"Disease"}],"attributes":[{"id":"A100","pred":"tao:has_database_id","subj":"100","obj":"Tax:2697049"},{"id":"A101","pred":"tao:has_database_id","subj":"101","obj":"MESH:D012131"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Activation of macrophages by coronavirus-19 leads to the release of pro-inflammatory cytokines, metalloproteinases and other proteolytic enzymes that can cause thrombi formation and severe respiratory dysfunction."}
Covid19_manual_annotation_v2
{"project":"Covid19_manual_annotation_v2","denotations":[{"id":"100","span":{"begin":29,"end":43},"obj":"Species"},{"id":"101","span":{"begin":189,"end":212},"obj":"Disease"},{"id":"T115","span":{"begin":0,"end":10},"obj":"PositiveRegulation"},{"id":"T116","span":{"begin":14,"end":25},"obj":"Anatomy"},{"id":"T117","span":{"begin":85,"end":94},"obj":"Biological"},{"id":"T17","span":{"begin":57,"end":64},"obj":"Localization"},{"id":"T18","span":{"begin":72,"end":84},"obj":"Disease"},{"id":"T19","span":{"begin":96,"end":114},"obj":"Gene"},{"id":"T191","span":{"begin":68,"end":71},"obj":"Type"},{"id":"T20","span":{"begin":125,"end":144},"obj":"Gene"},{"id":"T21","span":{"begin":182,"end":188},"obj":"NegativeRegulation"},{"id":"T22","span":{"begin":160,"end":177},"obj":"Disease"}],"relations":[{"id":"R41","pred":"is_a","subj":"T115","obj":"T116"},{"id":"R42","pred":"is_a","subj":"T116","obj":"T17"},{"id":"R222","pred":"of_a","subj":"T191","obj":"T18"},{"id":"R40","pred":"is_a","subj":"100","obj":"T115"},{"id":"R43","pred":"is_a","subj":"T17","obj":"T117"},{"id":"R44","pred":"is_a","subj":"T17","obj":"T19"},{"id":"R45","pred":"is_a","subj":"T17","obj":"T20"},{"id":"R46","pred":"cause_of","subj":"T117","obj":"T22"},{"id":"R47","pred":"cause_of","subj":"T19","obj":"T22"},{"id":"R48","pred":"cause_of","subj":"T20","obj":"T22"},{"id":"R49","pred":"of_a","subj":"T18","obj":"T117"},{"id":"R50","pred":"cause_of","subj":"T117","obj":"101"},{"id":"R51","pred":"cause_of","subj":"T19","obj":"101"},{"id":"R52","pred":"cause_of","subj":"T20","obj":"101"},{"id":"R53","pred":"is_a","subj":"T21","obj":"101"}],"attributes":[{"id":"A100","pred":"tao:has_database_id","subj":"100","obj":"Tax:2697049"},{"id":"A101","pred":"tao:has_database_id","subj":"101","obj":"MESH:D012131"},{"id":"A222","pred":"tao:has_database_id","subj":"T117","obj":"MESH:D016207"},{"id":"A221","pred":"tao:has_database_id","subj":"T116","obj":"MESH:D008264"},{"id":"A266","pred":"tao:has_database_id","subj":"T19","obj":"MESH:D045726"},{"id":"A269","pred":"tao:has_database_id","subj":"T20","obj":"MESH:D010447"},{"id":"A257","pred":"tao:has_database_id","subj":"T18","obj":"MESH:D007249"},{"id":"A252","pred":"Memo","subj":"T22","obj":"MESH:D013927"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"BioProject","uri":"https://www.ncbi.nlm.nih.gov/bioproject/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"},{"prefix":"HP","uri":"https://hpo.jax.org/app/browse/term/HP:"},{"prefix":"BioSample","uri":"https://www.ncbi.nlm.nih.gov/biosample/"}],"text":"Activation of macrophages by coronavirus-19 leads to the release of pro-inflammatory cytokines, metalloproteinases and other proteolytic enzymes that can cause thrombi formation and severe respiratory dysfunction."}
Zoonoses
{"project":"Zoonoses","denotations":[{"id":"100","span":{"begin":29,"end":43},"obj":"Species"},{"id":"101","span":{"begin":189,"end":212},"obj":"Disease"},{"id":"T115","span":{"begin":0,"end":10},"obj":"PositiveRegulation"},{"id":"T116","span":{"begin":14,"end":25},"obj":"Anatomy"},{"id":"T117","span":{"begin":85,"end":94},"obj":"Biological"},{"id":"T17","span":{"begin":57,"end":64},"obj":"Localization"},{"id":"T18","span":{"begin":68,"end":84},"obj":"Disease"},{"id":"T19","span":{"begin":96,"end":114},"obj":"Gene"},{"id":"T20","span":{"begin":125,"end":144},"obj":"Gene"},{"id":"T21","span":{"begin":182,"end":188},"obj":"NegativeRegulation"},{"id":"T22","span":{"begin":160,"end":177},"obj":"Disease"}],"relations":[{"id":"R45","pred":"is_a","subj":"T17","obj":"T20"},{"id":"R40","pred":"is_a","subj":"100","obj":"T115"},{"id":"R41","pred":"is_a","subj":"T115","obj":"T116"},{"id":"R42","pred":"is_a","subj":"T116","obj":"T17"},{"id":"R43","pred":"is_a","subj":"T17","obj":"T117"},{"id":"R44","pred":"is_a","subj":"T17","obj":"T19"},{"id":"R46","pred":"cause_of","subj":"T117","obj":"T22"},{"id":"R47","pred":"cause_of","subj":"T19","obj":"T22"},{"id":"R48","pred":"cause_of","subj":"T20","obj":"T22"},{"id":"R49","pred":"of_a","subj":"T18","obj":"T117"},{"id":"R50","pred":"cause_of","subj":"T117","obj":"101"},{"id":"R51","pred":"cause_of","subj":"T19","obj":"101"},{"id":"R52","pred":"cause_of","subj":"T20","obj":"101"},{"id":"R53","pred":"is_a","subj":"T21","obj":"101"}],"attributes":[{"id":"A269","pred":"tao:has_database_id","subj":"T20","obj":"MESH:D010447"},{"id":"A266","pred":"tao:has_database_id","subj":"T19","obj":"MESH:D045726"},{"id":"A100","pred":"tao:has_database_id","subj":"100","obj":"Tax:2697049"},{"id":"A252","pred":"Memo","subj":"T22","obj":"MESH:D013927"},{"id":"A221","pred":"tao:has_database_id","subj":"T116","obj":"MESH:D008264"},{"id":"A101","pred":"tao:has_database_id","subj":"101","obj":"MESH:D012131"},{"id":"A279","pred":"Memo","subj":"T18","obj":"MESH:D007249"},{"id":"A222","pred":"tao:has_database_id","subj":"T117","obj":"MESH:D016207"}],"text":"Activation of macrophages by coronavirus-19 leads to the release of pro-inflammatory cytokines, metalloproteinases and other proteolytic enzymes that can cause thrombi formation and severe respiratory dysfunction."}
Covid19_manual_annotation
{"project":"Covid19_manual_annotation","denotations":[{"id":"100","span":{"begin":29,"end":43},"obj":"Species"},{"id":"101","span":{"begin":189,"end":212},"obj":"Disease"},{"id":"T115","span":{"begin":0,"end":10},"obj":"Activate"},{"id":"T116","span":{"begin":14,"end":25},"obj":"Biological"},{"id":"T117","span":{"begin":85,"end":94},"obj":"Biological"},{"id":"T17","span":{"begin":57,"end":64},"obj":"Increase"},{"id":"T18","span":{"begin":68,"end":84},"obj":"Type"},{"id":"T19","span":{"begin":96,"end":114},"obj":"Biological"},{"id":"T20","span":{"begin":119,"end":144},"obj":"Biological"},{"id":"T21","span":{"begin":182,"end":188},"obj":"Severity"},{"id":"T22","span":{"begin":160,"end":177},"obj":"Disease"}],"relations":[{"id":"R137","pred":"cause_of","subj":"T17","obj":"T22"},{"id":"R138","pred":"cause_of","subj":"T17","obj":"101"},{"id":"R139","pred":"is_a","subj":"T115","obj":"T17"},{"id":"R140","pred":"is_a","subj":"T17","obj":"T117"},{"id":"R141","pred":"is_a","subj":"T17","obj":"T20"},{"id":"R142","pred":"is_a","subj":"T17","obj":"T19"},{"id":"R143","pred":"of_a","subj":"T115","obj":"T116"},{"id":"R144","pred":"by","subj":"100","obj":"T115"},{"id":"R145","pred":"of_a","subj":"T21","obj":"101"},{"id":"R176","pred":"of_a","subj":"T18","obj":"T117"}],"attributes":[{"id":"A100","pred":"tao:has_database_id","subj":"100","obj":"Tax:2697049"},{"id":"A101","pred":"tao:has_database_id","subj":"101","obj":"MESH:D012131"}],"text":"Activation of macrophages by coronavirus-19 leads to the release of pro-inflammatory cytokines, metalloproteinases and other proteolytic enzymes that can cause thrombi formation and severe respiratory dysfunction."}
Inflammaging
{"project":"Inflammaging","denotations":[{"id":"T7","span":{"begin":0,"end":213},"obj":"Sentence"},{"id":"T7","span":{"begin":0,"end":213},"obj":"Sentence"}],"text":"Activation of macrophages by coronavirus-19 leads to the release of pro-inflammatory cytokines, metalloproteinases and other proteolytic enzymes that can cause thrombi formation and severe respiratory dysfunction."}