PubMed:32736597 / 1913-2734 JSONTXT

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LitCovid-OGER-BB

Id Subject Object Predicate Lexical cue
T44 151-169 CHEBI:5801 denotes hydroxychloroquine
T45 151-169 DG_20 denotes hydroxychloroquine
T46 151-169 CHEBI:5801 denotes hydroxychloroquine
T47 208-226 CHEBI:5801 denotes hydroxychloroquine
T48 208-226 DG_20 denotes hydroxychloroquine
T49 208-226 CHEBI:5801 denotes hydroxychloroquine
T50 227-238 CHEBI:3638 denotes chloroquine
T51 227-238 DG_10 denotes chloroquine
T52 227-238 CHEBI:3638 denotes chloroquine
T53 268-273 UBERON:0000948 denotes heart
T54 307-312 UBERON:0000948 denotes heart
T55 346-351 UBERON:0000948 denotes heart
T56 372-381 CHEBI:77608 denotes diuretics
T57 372-381 CHEBI:77608 denotes diuretics
T58 393-400 CHEBI:17234 denotes glucose
T59 393-400 CHEBI:17234 denotes glucose
T60 400-403 CHEBI:14314 denotes -6-
T61 400-403 CHEBI:14314 denotes -6-
T62 403-412 CHEBI:18367 denotes phosphate
T63 403-412 CHEBI:18367 denotes phosphate
T64 508-514 UBERON:0002113 denotes kidney
T65 561-572 UBERON:0002082 denotes ventricular
T66 630-642 UBERON:0001016 denotes neurological
T67 713-717 CHEBI:23888 denotes drug
T68 713-717 CHEBI:23888 denotes drug
T69 718-722 CHEBI:23888 denotes drug
T70 718-722 CHEBI:23888 denotes drug
T71 787-792 CHEBI:23888 denotes drugs
T72 787-792 CHEBI:23888 denotes drugs

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T4 268-273 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T5 307-312 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T6 346-351 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T7 393-400 Body_part denotes glucose http://purl.org/sig/ont/fma/fma82743
T8 508-514 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T9 647-653 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 268-273 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T2 307-312 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T3 346-351 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T4 508-514 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T17 286-296 Disease denotes arrhythmia http://purl.obolibrary.org/obo/MONDO_0007263
T18 298-320 Disease denotes ischemic heart disease http://purl.obolibrary.org/obo/MONDO_0024644
T19 307-320 Disease denotes heart disease http://purl.obolibrary.org/obo/MONDO_0005267
T20 322-333 Disease denotes retinopathy http://purl.obolibrary.org/obo/MONDO_0005283
T21 335-359 Disease denotes congestive heart failure http://purl.obolibrary.org/obo/MONDO_0005009
T22 346-359 Disease denotes heart failure http://purl.obolibrary.org/obo/MONDO_0005252
T23 383-389 Disease denotes favism http://purl.obolibrary.org/obo/MONDO_0001761
T24 428-432 Disease denotes G6PD http://purl.obolibrary.org/obo/MONDO_0005775
T25 446-454 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T26 500-522 Disease denotes chronic kidney disease http://purl.obolibrary.org/obo/MONDO_0005300
T27 508-522 Disease denotes kidney disease http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240
T29 573-583 Disease denotes arrhythmia http://purl.obolibrary.org/obo/MONDO_0007263
T30 599-621 Disease denotes hematologic malignancy http://purl.obolibrary.org/obo/MONDO_0002334|http://purl.obolibrary.org/obo/MONDO_0044881
T32 647-661 Disease denotes mental illness http://purl.obolibrary.org/obo/MONDO_0002025

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T21 27-29 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T22 37-41 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T23 37-41 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T24 45-51 http://purl.obolibrary.org/obo/UBERON_0003100 denotes female
T25 268-273 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T26 268-273 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T27 268-273 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T28 268-273 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T29 307-312 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T30 307-312 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T31 307-312 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T32 307-312 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T33 346-351 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T34 346-351 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T35 346-351 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T36 346-351 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T37 508-514 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T38 508-514 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T39 508-514 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T13 37-41 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780
T14 151-169 Chemical denotes hydroxychloroquine http://purl.obolibrary.org/obo/CHEBI_5801
T15 208-226 Chemical denotes hydroxychloroquine http://purl.obolibrary.org/obo/CHEBI_5801
T16 227-238 Chemical denotes chloroquine http://purl.obolibrary.org/obo/CHEBI_3638
T17 372-381 Chemical denotes diuretics http://purl.obolibrary.org/obo/CHEBI_35498
T18 393-400 Chemical denotes glucose http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167
T20 403-412 Chemical denotes phosphate http://purl.obolibrary.org/obo/CHEBI_18367|http://purl.obolibrary.org/obo/CHEBI_26020|http://purl.obolibrary.org/obo/CHEBI_35780|http://purl.obolibrary.org/obo/CHEBI_43474
T24 713-717 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T25 718-722 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T26 787-792 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T6 274-280 http://purl.obolibrary.org/obo/GO_0048511 denotes rhythm

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T15 0-821 Sentence denotes All subjects must be aged ≥18 years, male or female, must be willing and able to give informed consent and must not have any contraindications to take hydroxychloroquine (intolerance or previous toxicity for hydroxychloroquine/chloroquine, bradycardia or reduction in heart rhythm with arrhythmia, ischemic heart disease, retinopathy, congestive heart failure with use of diuretics, favism or glucose-6-phosphate dehydrogenase (G6PD) deficiency, diabetes type 1, major comorbidities such as advanced chronic kidney disease or dialysis therapy, known history of ventricular arrhythmia, any oncologic/hematologic malignancy, severe neurological and mental illness, current use of medications with known significant drug-drug interactions, and known prolonged QT syndrome or current use of drugs with known QT prolongation).

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
107 195-203 Disease denotes toxicity MESH:D064420
108 240-251 Disease denotes bradycardia MESH:D001919
109 286-296 Disease denotes arrhythmia MESH:D001145
110 298-320 Disease denotes ischemic heart disease MESH:D003324
111 322-333 Disease denotes retinopathy MESH:D012164
112 335-359 Disease denotes congestive heart failure MESH:D006333
113 383-389 Disease denotes favism MESH:D005236
114 393-444 Disease denotes glucose-6-phosphate dehydrogenase (G6PD) deficiency MESH:D005955
115 446-454 Disease denotes diabetes MESH:D003920
116 500-522 Disease denotes chronic kidney disease MESH:D051436
117 561-583 Disease denotes ventricular arrhythmia MESH:D001145
118 599-621 Disease denotes hematologic malignancy MESH:D019337
119 647-661 Disease denotes mental illness MESH:D002908
120 747-768 Disease denotes prolonged QT syndrome MESH:D008133
121 804-819 Disease denotes QT prolongation MESH:D008133

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 240-251 Phenotype denotes bradycardia http://purl.obolibrary.org/obo/HP_0001662
T2 286-296 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T3 322-333 Phenotype denotes retinopathy http://purl.obolibrary.org/obo/HP_0000488
T4 335-359 Phenotype denotes congestive heart failure http://purl.obolibrary.org/obo/HP_0001635
T5 500-522 Phenotype denotes chronic kidney disease http://purl.obolibrary.org/obo/HP_0012622
T6 561-583 Phenotype denotes ventricular arrhythmia http://purl.obolibrary.org/obo/HP_0004308

hydroxychloroquine

Id Subject Object Predicate Lexical cue hp_id
T1 240-251 Phenotype denotes bradycardia http://purl.obolibrary.org/obo/HP_0001662
T2 286-296 Phenotype denotes arrhythmia http://purl.obolibrary.org/obo/HP_0011675
T3 322-333 Phenotype denotes retinopathy http://purl.obolibrary.org/obo/HP_0000488
T4 335-359 Phenotype denotes congestive heart failure http://purl.obolibrary.org/obo/HP_0001635
T5 500-522 Phenotype denotes chronic kidney disease http://purl.obolibrary.org/obo/HP_0012622
T6 561-583 Phenotype denotes ventricular arrhythmia http://purl.obolibrary.org/obo/HP_0004308