PubMed:32520107
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/32520107","sourcedb":"PubMed","sourceid":"32520107","source_url":"https://www.ncbi.nlm.nih.gov/pubmed/32520107","text":"COVID-19 in the city of Rio de Janeiro: spatial analysis of first confirmed cases and deaths.\nCOVID-19 no município do Rio de Janeiro: análise espacial da ocorrência dos primeiros casos e óbitos confirmados.\nOBJECTIVE: to describe the spatial distribution of the first confirmed COVID-19 cases and deaths in Rio de Janeiro.\nMETHODS: this was an ecological study of confirmed SARS-CoV-2 cases and deaths between March 6thand April 10th, 2020. Incidence, mortality, lethality, excess risk and global and local Moran rates were calculated.\nRESULTS: 1,808 confirmed cases and 92 confirmed deaths were recorded. The COVID-19 incidence rate was 26.8/100,000 inhab., the mortality rate was 1.36/100,000 inhab. and lethality rate 5%. The incidence rate in eight neighborhoods was 4-12 times higher than the overall rate for the municipality: Joá, in the city's Western Zone; Cosme Velho, Gávea, Ipanema, Jardim Botânico, Lagoa, Leblon and São Conrado, in its Southern Zone.\nCONCLUSION: high risk of COVID-19 infection and deaths was found in neighborhoods in the Southern Zone of the city of Rio de Janeiro. Neighborhoods in the Northern Zone of the city also stand out in relation to high risk of death.","tracks":[{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T1","span":{"begin":0,"end":8},"obj":"Disease"},{"id":"T2","span":{"begin":94,"end":102},"obj":"Disease"},{"id":"T3","span":{"begin":279,"end":287},"obj":"Disease"},{"id":"T4","span":{"begin":375,"end":383},"obj":"Disease"},{"id":"T5","span":{"begin":611,"end":619},"obj":"Disease"},{"id":"T6","span":{"begin":991,"end":999},"obj":"Disease"},{"id":"T7","span":{"begin":1000,"end":1009},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A7","pred":"mondo_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T1","span":{"begin":152,"end":154},"obj":"http://www.ebi.ac.uk/efo/EFO_0000265"},{"id":"T2","span":{"begin":208,"end":217},"obj":"http://purl.obolibrary.org/obo/BFO_0000030"},{"id":"T3","span":{"begin":772,"end":776},"obj":"http://purl.obolibrary.org/obo/CLO_0001360"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"2","span":{"begin":0,"end":8},"obj":"Disease"},{"id":"3","span":{"begin":86,"end":92},"obj":"Disease"},{"id":"17","span":{"begin":279,"end":287},"obj":"Disease"},{"id":"18","span":{"begin":298,"end":304},"obj":"Disease"},{"id":"19","span":{"begin":375,"end":385},"obj":"Species"},{"id":"20","span":{"begin":396,"end":402},"obj":"Disease"},{"id":"21","span":{"begin":453,"end":462},"obj":"Disease"},{"id":"22","span":{"begin":585,"end":591},"obj":"Disease"},{"id":"23","span":{"begin":611,"end":619},"obj":"Disease"},{"id":"24","span":{"begin":664,"end":673},"obj":"Disease"},{"id":"25","span":{"begin":887,"end":894},"obj":"Disease"},{"id":"26","span":{"begin":991,"end":999},"obj":"Disease"},{"id":"27","span":{"begin":1000,"end":1009},"obj":"Disease"},{"id":"28","span":{"begin":1014,"end":1020},"obj":"Disease"},{"id":"29","span":{"begin":1190,"end":1195},"obj":"Disease"}],"attributes":[{"id":"A2","pred":"tao:has_database_id","subj":"2","obj":"MESH:C000657245"},{"id":"A3","pred":"tao:has_database_id","subj":"3","obj":"MESH:D003643"},{"id":"A17","pred":"tao:has_database_id","subj":"17","obj":"MESH:C000657245"},{"id":"A18","pred":"tao:has_database_id","subj":"18","obj":"MESH:D003643"},{"id":"A19","pred":"tao:has_database_id","subj":"19","obj":"Tax:2697049"},{"id":"A20","pred":"tao:has_database_id","subj":"20","obj":"MESH:D003643"},{"id":"A21","pred":"tao:has_database_id","subj":"21","obj":"MESH:D003643"},{"id":"A22","pred":"tao:has_database_id","subj":"22","obj":"MESH:D003643"},{"id":"A23","pred":"tao:has_database_id","subj":"23","obj":"MESH:C000657245"},{"id":"A24","pred":"tao:has_database_id","subj":"24","obj":"MESH:D003643"},{"id":"A26","pred":"tao:has_database_id","subj":"26","obj":"MESH:C000657245"},{"id":"A27","pred":"tao:has_database_id","subj":"27","obj":"MESH:D007239"},{"id":"A28","pred":"tao:has_database_id","subj":"28","obj":"MESH:D003643"},{"id":"A29","pred":"tao:has_database_id","subj":"29","obj":"MESH:D003643"},{"subj":"2","pred":"source","obj":"LitCovid-PubTator"},{"subj":"3","pred":"source","obj":"LitCovid-PubTator"},{"subj":"17","pred":"source","obj":"LitCovid-PubTator"},{"subj":"18","pred":"source","obj":"LitCovid-PubTator"},{"subj":"19","pred":"source","obj":"LitCovid-PubTator"},{"subj":"20","pred":"source","obj":"LitCovid-PubTator"},{"subj":"21","pred":"source","obj":"LitCovid-PubTator"},{"subj":"22","pred":"source","obj":"LitCovid-PubTator"},{"subj":"23","pred":"source","obj":"LitCovid-PubTator"},{"subj":"24","pred":"source","obj":"LitCovid-PubTator"},{"subj":"25","pred":"source","obj":"LitCovid-PubTator"},{"subj":"26","pred":"source","obj":"LitCovid-PubTator"},{"subj":"27","pred":"source","obj":"LitCovid-PubTator"},{"subj":"28","pred":"source","obj":"LitCovid-PubTator"},{"subj":"29","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T1","span":{"begin":0,"end":93},"obj":"Sentence"},{"id":"T2","span":{"begin":94,"end":207},"obj":"Sentence"},{"id":"T3","span":{"begin":208,"end":323},"obj":"Sentence"},{"id":"T4","span":{"begin":324,"end":441},"obj":"Sentence"},{"id":"T5","span":{"begin":442,"end":536},"obj":"Sentence"},{"id":"T6","span":{"begin":537,"end":545},"obj":"Sentence"},{"id":"T7","span":{"begin":546,"end":606},"obj":"Sentence"},{"id":"T8","span":{"begin":607,"end":725},"obj":"Sentence"},{"id":"T9","span":{"begin":726,"end":833},"obj":"Sentence"},{"id":"T10","span":{"begin":834,"end":965},"obj":"Sentence"},{"id":"T11","span":{"begin":966,"end":1099},"obj":"Sentence"},{"id":"T12","span":{"begin":1100,"end":1196},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-sentences"},{"subj":"T2","pred":"source","obj":"LitCovid-sentences"},{"subj":"T3","pred":"source","obj":"LitCovid-sentences"},{"subj":"T4","pred":"source","obj":"LitCovid-sentences"},{"subj":"T5","pred":"source","obj":"LitCovid-sentences"},{"subj":"T6","pred":"source","obj":"LitCovid-sentences"},{"subj":"T7","pred":"source","obj":"LitCovid-sentences"},{"subj":"T8","pred":"source","obj":"LitCovid-sentences"},{"subj":"T9","pred":"source","obj":"LitCovid-sentences"},{"subj":"T10","pred":"source","obj":"LitCovid-sentences"},{"subj":"T11","pred":"source","obj":"LitCovid-sentences"},{"subj":"T12","pred":"source","obj":"LitCovid-sentences"}]},{"project":"ENG_RE_CONSENSUS","denotations":[{"id":"T0","span":{"begin":279,"end":287},"obj":"DOID_0080600"},{"id":"T3","span":{"begin":375,"end":391},"obj":"DOID_0080600"},{"id":"T1","span":{"begin":611,"end":619},"obj":"DOID_0080600"},{"id":"T2","span":{"begin":991,"end":999},"obj":"DOID_0080600"}],"attributes":[{"subj":"T0","pred":"source","obj":"ENG_RE_CONSENSUS"},{"subj":"T3","pred":"source","obj":"ENG_RE_CONSENSUS"},{"subj":"T1","pred":"source","obj":"ENG_RE_CONSENSUS"},{"subj":"T2","pred":"source","obj":"ENG_RE_CONSENSUS"}]},{"project":"ENG_NER_NEL_CONSENSUS","denotations":[{"id":"T10","span":{"begin":611,"end":619},"obj":"DOID:0080600"},{"id":"T13","span":{"begin":620,"end":629},"obj":"MESH:D015994"},{"id":"T15","span":{"begin":664,"end":673},"obj":"MESH:D009026"},{"id":"T19","span":{"begin":730,"end":739},"obj":"MESH:D015994"},{"id":"T2","span":{"begin":279,"end":287},"obj":"DOID:0080600"},{"id":"T21","span":{"begin":799,"end":806},"obj":"MESH:D016424"},{"id":"T23","span":{"begin":983,"end":987},"obj":"MESH:D012306"},{"id":"T24","span":{"begin":991,"end":999},"obj":"DOID:0080600"},{"id":"T27","span":{"begin":1182,"end":1186},"obj":"MESH:D012306"},{"id":"T28","span":{"begin":375,"end":385},"obj":"DOID:0080600"},{"id":"T29","span":{"begin":279,"end":287},"obj":"MESH:D000086382"},{"id":"T30","span":{"begin":375,"end":385},"obj":"MESH:D000086382"},{"id":"T31","span":{"begin":611,"end":619},"obj":"MESH:D000086382"},{"id":"T32","span":{"begin":991,"end":999},"obj":"MESH:D000086382"},{"id":"T33","span":{"begin":1190,"end":1195},"obj":"MESH:D003643"},{"id":"T7","span":{"begin":442,"end":451},"obj":"MESH:D015994"},{"id":"T8","span":{"begin":453,"end":462},"obj":"MESH:D009026"},{"id":"T9","span":{"begin":482,"end":486},"obj":"MESH:D012306"}],"attributes":[{"subj":"T10","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T13","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T15","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T19","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T2","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T21","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T23","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T24","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T27","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T28","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T29","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T30","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T31","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T32","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T33","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T7","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T8","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"},{"subj":"T9","pred":"source","obj":"ENG_NER_NEL_CONSENSUS"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-MONDO","color":"#a693ec","default":true},{"id":"LitCovid-PD-CLO","color":"#99ec93"},{"id":"LitCovid-PubTator","color":"#ec93b3"},{"id":"LitCovid-sentences","color":"#93cdec"},{"id":"ENG_RE_CONSENSUS","color":"#e7ec93"},{"id":"ENG_NER_NEL_CONSENSUS","color":"#d793ec"}]}]}}