PubMed:29959084
Annnotations
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-128 | Sentence | denotes | Serum responsive proteome reveals correlation between oxidative phosphorylation and morphogenesis in Candida albicans ATCC10231. |
T2 | 129-315 | Sentence | denotes | To understand the impact of fetal bovine serum (FBS) on metabolism and cellular architecture in addition to morphogenesis, we have identified FBS responsive proteome of Candida albicans. |
T3 | 316-410 | Sentence | denotes | FBS induced 34% hyphae and 60% pseudohyphae in C. albicans at 30 °C while 98% hyphae at 37 °C. |
T4 | 411-518 | Sentence | denotes | LC-MS/MS analysis revealed that 285 proteins modulated significantly in response to FBS at 30 °C and 37 °C. |
T5 | 519-640 | Sentence | denotes | Out of which 152 were upregulated and 62 were downregulated at 30 °C while 18 were up and 53 were downregulated at 37 °C. |
T6 | 641-886 | Sentence | denotes | Functional annotation suggests that FBS may inhibit glycolysis and fermentative pathway and enhance oxidative phosphorylation (OxPhos), TCA cycle, amino acid and fatty acid metabolism indicating a use of alternative energy source by C. albicans. |
T7 | 887-1040 | Sentence | denotes | OxPhos inhibition assay using sodium azide corroborated the correlation between inhibition of glycolysis and enhanced OxPhos with pseudohyphae formation. |
T8 | 1041-1214 | Sentence | denotes | C. albicans induced hyphae in response to FBS irrespective of down regulation of Ras1,Asr1/Asr2, indicates the possible involvement of MAPK and cAMP-PKA independent pathway. |
T9 | 1215-1392 | Sentence | denotes | The Cell wall of cells grown in presence of FBS at 30 °C was rich in mannan, Beta 1,3-glucan and chitin while membranes were rich in ergosterol compared to those grown at 37 °C. |
T10 | 1393-1419 | Sentence | denotes | SIGNIFICANCE OF THE STUDY: |
T11 | 1420-1551 | Sentence | denotes | This is the first study suggesting a correlation between OxPhos and morphogenesis especially pseudohyphae formation in C. albicans. |
T12 | 1552-1699 | Sentence | denotes | Our data also indicate that fetal bovine serum (FBS) induced morphogenesis is multifactorial and may involve MAPK and cAMP-PKA independent pathway. |
T13 | 1700-1855 | Sentence | denotes | In addition to morphogenesis, our study provides an insight in to the modulation of metabolism and cellular architecture of C. albicans in response to FBS. |
Glycosmos6-MAT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 332-338 | http://purl.obolibrary.org/obo/MAT_0000010 | denotes | hyphae |
T2 | 394-400 | http://purl.obolibrary.org/obo/MAT_0000010 | denotes | hyphae |
T3 | 1061-1067 | http://purl.obolibrary.org/obo/MAT_0000010 | denotes | hyphae |
mondo_disease
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 408-413 | Disease | denotes | C. LC | http://purl.obolibrary.org/obo/MONDO_0004315 |
Glycan-GlyCosmos
Id | Subject | Object | Predicate | Lexical cue | image |
---|---|---|---|---|---|
T1 | 1312-1318 | Glycan | denotes | chitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G97099AY |
GlyCosmos15-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 408-413 | Disease | denotes | C. LC | http://purl.obolibrary.org/obo/MONDO_0004315 |
GlyCosmos15-NCBITAXON
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 101-117 | OrganismTaxon | denotes | Candida albicans | 5476 |
T2 | 163-169 | OrganismTaxon | denotes | bovine | 9913 |
T3 | 298-314 | OrganismTaxon | denotes | Candida albicans | 5476 |
T4 | 1586-1592 | OrganismTaxon | denotes | bovine | 9913 |
GlyCosmos15-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 1224-1228 | Body_part | denotes | wall | http://purl.obolibrary.org/obo/UBERON_0000060 |
T2 | 1325-1334 | Body_part | denotes | membranes | http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158 |
GlyCosmos15-MAT
Id | Subject | Object | Predicate | Lexical cue | mat_id |
---|---|---|---|---|---|
T1 | 332-338 | Body_part | denotes | hyphae | http://purl.obolibrary.org/obo/MAT_0000010 |
T2 | 394-400 | Body_part | denotes | hyphae | http://purl.obolibrary.org/obo/MAT_0000010 |
T3 | 1061-1067 | Body_part | denotes | hyphae | http://purl.obolibrary.org/obo/MAT_0000010 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-128 | Sentence | denotes | Serum responsive proteome reveals correlation between oxidative phosphorylation and morphogenesis in Candida albicans ATCC10231. |
T2 | 129-315 | Sentence | denotes | To understand the impact of fetal bovine serum (FBS) on metabolism and cellular architecture in addition to morphogenesis, we have identified FBS responsive proteome of Candida albicans. |
T3 | 316-410 | Sentence | denotes | FBS induced 34% hyphae and 60% pseudohyphae in C. albicans at 30 °C while 98% hyphae at 37 °C. |
T4 | 411-518 | Sentence | denotes | LC-MS/MS analysis revealed that 285 proteins modulated significantly in response to FBS at 30 °C and 37 °C. |
T5 | 519-640 | Sentence | denotes | Out of which 152 were upregulated and 62 were downregulated at 30 °C while 18 were up and 53 were downregulated at 37 °C. |
T6 | 641-886 | Sentence | denotes | Functional annotation suggests that FBS may inhibit glycolysis and fermentative pathway and enhance oxidative phosphorylation (OxPhos), TCA cycle, amino acid and fatty acid metabolism indicating a use of alternative energy source by C. albicans. |
T7 | 887-1040 | Sentence | denotes | OxPhos inhibition assay using sodium azide corroborated the correlation between inhibition of glycolysis and enhanced OxPhos with pseudohyphae formation. |
T8 | 1041-1214 | Sentence | denotes | C. albicans induced hyphae in response to FBS irrespective of down regulation of Ras1,Asr1/Asr2, indicates the possible involvement of MAPK and cAMP-PKA independent pathway. |
T9 | 1215-1392 | Sentence | denotes | The Cell wall of cells grown in presence of FBS at 30 °C was rich in mannan, Beta 1,3-glucan and chitin while membranes were rich in ergosterol compared to those grown at 37 °C. |
T10 | 1393-1419 | Sentence | denotes | SIGNIFICANCE OF THE STUDY: |
T11 | 1420-1551 | Sentence | denotes | This is the first study suggesting a correlation between OxPhos and morphogenesis especially pseudohyphae formation in C. albicans. |
T12 | 1552-1699 | Sentence | denotes | Our data also indicate that fetal bovine serum (FBS) induced morphogenesis is multifactorial and may involve MAPK and cAMP-PKA independent pathway. |
T13 | 1700-1855 | Sentence | denotes | In addition to morphogenesis, our study provides an insight in to the modulation of metabolism and cellular architecture of C. albicans in response to FBS. |
GlyCosmos15-Sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-128 | Sentence | denotes | Serum responsive proteome reveals correlation between oxidative phosphorylation and morphogenesis in Candida albicans ATCC10231. |
T2 | 129-315 | Sentence | denotes | To understand the impact of fetal bovine serum (FBS) on metabolism and cellular architecture in addition to morphogenesis, we have identified FBS responsive proteome of Candida albicans. |
T3 | 316-886 | Sentence | denotes | FBS induced 34% hyphae and 60% pseudohyphae in C. albicans at 30 °C while 98% hyphae at 37 °C. LC-MS/MS analysis revealed that 285 proteins modulated significantly in response to FBS at 30 °C and 37 °C. Out of which 152 were upregulated and 62 were downregulated at 30 °C while 18 were up and 53 were downregulated at 37 °C. Functional annotation suggests that FBS may inhibit glycolysis and fermentative pathway and enhance oxidative phosphorylation (OxPhos), TCA cycle, amino acid and fatty acid metabolism indicating a use of alternative energy source by C. albicans. |
T4 | 887-1040 | Sentence | denotes | OxPhos inhibition assay using sodium azide corroborated the correlation between inhibition of glycolysis and enhanced OxPhos with pseudohyphae formation. |
T5 | 1041-1214 | Sentence | denotes | C. albicans induced hyphae in response to FBS irrespective of down regulation of Ras1,Asr1/Asr2, indicates the possible involvement of MAPK and cAMP-PKA independent pathway. |
T6 | 1215-1392 | Sentence | denotes | The Cell wall of cells grown in presence of FBS at 30 °C was rich in mannan, Beta 1,3-glucan and chitin while membranes were rich in ergosterol compared to those grown at 37 °C. |
T7 | 1393-1419 | Sentence | denotes | SIGNIFICANCE OF THE STUDY: |
T8 | 1420-1551 | Sentence | denotes | This is the first study suggesting a correlation between OxPhos and morphogenesis especially pseudohyphae formation in C. albicans. |
T9 | 1552-1699 | Sentence | denotes | Our data also indicate that fetal bovine serum (FBS) induced morphogenesis is multifactorial and may involve MAPK and cAMP-PKA independent pathway. |
T10 | 1700-1855 | Sentence | denotes | In addition to morphogenesis, our study provides an insight in to the modulation of metabolism and cellular architecture of C. albicans in response to FBS. |
GlyCosmos15-Glycan
Id | Subject | Object | Predicate | Lexical cue | image |
---|---|---|---|---|---|
T1 | 1312-1318 | Glycan | denotes | chitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G97099AY |
NCBITAXON
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 101-117 | OrganismTaxon | denotes | Candida albicans | 5476 |
T2 | 163-169 | OrganismTaxon | denotes | bovine | 9913 |
T3 | 298-314 | OrganismTaxon | denotes | Candida albicans | 5476 |
T4 | 1586-1592 | OrganismTaxon | denotes | bovine | 9913 |
Anatomy-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 1224-1228 | Body_part | denotes | wall | http://purl.obolibrary.org/obo/UBERON_0000060 |
T2 | 1325-1334 | Body_part | denotes | membranes | http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158 |
Anatomy-MAT
Id | Subject | Object | Predicate | Lexical cue | mat_id |
---|---|---|---|---|---|
T1 | 332-338 | Body_part | denotes | hyphae | http://purl.obolibrary.org/obo/MAT_0000010 |
T2 | 394-400 | Body_part | denotes | hyphae | http://purl.obolibrary.org/obo/MAT_0000010 |
T3 | 1061-1067 | Body_part | denotes | hyphae | http://purl.obolibrary.org/obo/MAT_0000010 |