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GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 1422-1430 Glycan_Motif denotes LacdiNAc https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G31736BK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00057MO

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 1422-1430 https://glytoucan.org/Structures/Glycans/G00057MO denotes LacdiNAc
T2 1422-1430 https://glytoucan.org/Structures/Glycans/G31736BK denotes LacdiNAc

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 67-74 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryos
T2 128-138 http://purl.obolibrary.org/obo/MAT_0000373 denotes vertebrate
T3 201-208 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryos
T4 492-499 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryos
T5 1003-1009 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryo
T6 1126-1134 http://purl.obolibrary.org/obo/MAT_0000086 denotes antennae
T7 1177-1184 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryos
T8 1278-1286 http://purl.obolibrary.org/obo/MAT_0000179 denotes gastrula
T9 1278-1286 http://purl.obolibrary.org/obo/MAT_0000063 denotes gastrula
T10 1384-1391 http://purl.obolibrary.org/obo/MAT_0000086 denotes antenna
T11 1550-1557 http://purl.obolibrary.org/obo/MAT_0000086 denotes antenna
T12 1625-1632 http://purl.obolibrary.org/obo/MAT_0000086 denotes antenna
T13 1772-1779 http://purl.obolibrary.org/obo/MAT_0000086 denotes antenna
T14 1858-1868 http://purl.obolibrary.org/obo/MAT_0000373 denotes vertebrate

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-75 Sentence denotes Structures and developmental alterations of N-glycans of zebrafish embryos.
TextSentencer_T2 76-151 Sentence denotes Zebrafish is a model organism suitable for studying vertebrate development.
TextSentencer_T3 152-325 Sentence denotes We analyzed the N-glycan structures of zebrafish embryos and their alterations during zebrafish embryogenesis to obtain basic data for studying the roles of N-glycosylation.
TextSentencer_T4 326-463 Sentence denotes Multiple modes of high-performance liquid chromatography and multistage mass spectrometry were used for structural analysis of N-glycans.
TextSentencer_T5 464-798 Sentence denotes The N-glycans from deyolked embryos at 36 hours postfertilization, a mid-pharyngula stage, contained relatively higher amounts of complex- and hybrid-type glycans with LacNAc (Galβ1-4GlcNAc) and/or sialyl LacNAc without additional β1,4-Gal, which are commonly found in mammalian tissues, as well as abundant oligomannose-type glycans.
TextSentencer_T6 799-973 Sentence denotes Some of the complex- and hybrid-type glycans possessed various extended LacNAc structures, such as Galβ1-4LacNAc, LacNAc-repeat or unique (+/- dHex)-GalNAcα1-GlcNAcβ1-LacNAc.
TextSentencer_T7 974-1135 Sentence denotes In contrast, the yolk of the embryo contains predominant oligomannose-type glycans and complex-type glycans with Galβ1-4(Siaα2-3)Galβ1-4(Fucα1-3)GlcNAc antennae.
TextSentencer_T8 1136-1274 Sentence denotes N-Glycan profiles obtained from deyolked embryos at different stages showed stage-dependent variation of complex- and hybrid-type glycans.
TextSentencer_T9 1275-1457 Sentence denotes At gastrula and early segmentation stages, complex- and hybrid-type glycans were minor components, and their antenna structures were mainly sialyl LacdiNAc (Siaα2-6GalNAcβ1-4GlcNAc).
TextSentencer_T10 1458-1703 Sentence denotes From the mid-segmentation to pharyngula stages, those with LacNAc and/or α2,6-sialyl LacNAc antenna structures increased remarkably, and those with α2,3-sialyl LacNAc antenna, core α1,6-Fuc and bisecting GlcNAc modifications increased gradually.
TextSentencer_T11 1704-1881 Sentence denotes These results suggest the presence of mechanisms for regulating the antenna structures of complex/hybrid N-glycan biosynthesis in the phylotypic stage of vertebrate development.
T1 0-75 Sentence denotes Structures and developmental alterations of N-glycans of zebrafish embryos.
T2 76-151 Sentence denotes Zebrafish is a model organism suitable for studying vertebrate development.
T3 152-325 Sentence denotes We analyzed the N-glycan structures of zebrafish embryos and their alterations during zebrafish embryogenesis to obtain basic data for studying the roles of N-glycosylation.
T4 326-463 Sentence denotes Multiple modes of high-performance liquid chromatography and multistage mass spectrometry were used for structural analysis of N-glycans.
T5 464-798 Sentence denotes The N-glycans from deyolked embryos at 36 hours postfertilization, a mid-pharyngula stage, contained relatively higher amounts of complex- and hybrid-type glycans with LacNAc (Galβ1-4GlcNAc) and/or sialyl LacNAc without additional β1,4-Gal, which are commonly found in mammalian tissues, as well as abundant oligomannose-type glycans.
T6 799-973 Sentence denotes Some of the complex- and hybrid-type glycans possessed various extended LacNAc structures, such as Galβ1-4LacNAc, LacNAc-repeat or unique (+/- dHex)-GalNAcα1-GlcNAcβ1-LacNAc.
T7 974-1135 Sentence denotes In contrast, the yolk of the embryo contains predominant oligomannose-type glycans and complex-type glycans with Galβ1-4(Siaα2-3)Galβ1-4(Fucα1-3)GlcNAc antennae.
T8 1136-1274 Sentence denotes N-Glycan profiles obtained from deyolked embryos at different stages showed stage-dependent variation of complex- and hybrid-type glycans.
T9 1275-1457 Sentence denotes At gastrula and early segmentation stages, complex- and hybrid-type glycans were minor components, and their antenna structures were mainly sialyl LacdiNAc (Siaα2-6GalNAcβ1-4GlcNAc).
T10 1458-1703 Sentence denotes From the mid-segmentation to pharyngula stages, those with LacNAc and/or α2,6-sialyl LacNAc antenna structures increased remarkably, and those with α2,3-sialyl LacNAc antenna, core α1,6-Fuc and bisecting GlcNAc modifications increased gradually.
T11 1704-1881 Sentence denotes These results suggest the presence of mechanisms for regulating the antenna structures of complex/hybrid N-glycan biosynthesis in the phylotypic stage of vertebrate development.

NGLY1-deficiency

Id Subject Object Predicate Lexical cue
PD-NGLY1-deficiency-B_T1 1119-1125 chem:24139 denotes GlcNAc
PD-NGLY1-deficiency-B_T2 1662-1668 chem:24139 denotes GlcNAc

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 67-74 Body_part denotes embryos http://purl.obolibrary.org/obo/MAT_0000226
T2 128-138 Body_part denotes vertebrate http://purl.obolibrary.org/obo/MAT_0000373
T3 201-208 Body_part denotes embryos http://purl.obolibrary.org/obo/MAT_0000226
T4 492-499 Body_part denotes embryos http://purl.obolibrary.org/obo/MAT_0000226
T5 1003-1009 Body_part denotes embryo http://purl.obolibrary.org/obo/MAT_0000226
T6 1126-1134 Body_part denotes antennae http://purl.obolibrary.org/obo/MAT_0000086
T7 1177-1184 Body_part denotes embryos http://purl.obolibrary.org/obo/MAT_0000226
T8 1278-1286 Body_part denotes gastrula http://purl.obolibrary.org/obo/MAT_0000179|http://purl.obolibrary.org/obo/MAT_0000063
T10 1384-1391 Body_part denotes antenna http://purl.obolibrary.org/obo/MAT_0000086
T11 1550-1557 Body_part denotes antenna http://purl.obolibrary.org/obo/MAT_0000086
T12 1625-1632 Body_part denotes antenna http://purl.obolibrary.org/obo/MAT_0000086
T13 1772-1779 Body_part denotes antenna http://purl.obolibrary.org/obo/MAT_0000086
T14 1858-1868 Body_part denotes vertebrate http://purl.obolibrary.org/obo/MAT_0000373

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 632-638 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T2 669-675 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T3 871-877 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T4 905-911 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T5 913-919 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T6 948-954 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T7 966-972 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T8 1439-1445 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T9 1517-1523 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T10 1543-1549 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T11 1618-1624 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR

GlyCosmos15-NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 57-66 OrganismTaxon denotes zebrafish 7955
T2 76-85 OrganismTaxon denotes Zebrafish 7955
T3 191-200 OrganismTaxon denotes zebrafish 7955
T4 238-247 OrganismTaxon denotes zebrafish 7955

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 97-105 Body_part denotes organism http://purl.obolibrary.org/obo/UBERON_0000468
T2 991-995 Body_part denotes yolk http://purl.obolibrary.org/obo/UBERON_0007378|http://purl.obolibrary.org/obo/UBERON_2000084
T4 1003-1009 Body_part denotes embryo http://purl.obolibrary.org/obo/UBERON_0000922
T5 1278-1286 Body_part denotes gastrula http://purl.obolibrary.org/obo/UBERON_0004734
T6 1384-1391 Body_part denotes antenna http://purl.obolibrary.org/obo/UBERON_0000972
T7 1550-1557 Body_part denotes antenna http://purl.obolibrary.org/obo/UBERON_0000972
T8 1625-1632 Body_part denotes antenna http://purl.obolibrary.org/obo/UBERON_0000972
T9 1772-1779 Body_part denotes antenna http://purl.obolibrary.org/obo/UBERON_0000972

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 67-74 Body_part denotes embryos http://purl.obolibrary.org/obo/MAT_0000226
T2 128-138 Body_part denotes vertebrate http://purl.obolibrary.org/obo/MAT_0000373
T3 201-208 Body_part denotes embryos http://purl.obolibrary.org/obo/MAT_0000226
T4 492-499 Body_part denotes embryos http://purl.obolibrary.org/obo/MAT_0000226
T5 1003-1009 Body_part denotes embryo http://purl.obolibrary.org/obo/MAT_0000226
T6 1126-1134 Body_part denotes antennae http://purl.obolibrary.org/obo/MAT_0000086
T7 1177-1184 Body_part denotes embryos http://purl.obolibrary.org/obo/MAT_0000226
T8 1278-1286 Body_part denotes gastrula http://purl.obolibrary.org/obo/MAT_0000179|http://purl.obolibrary.org/obo/MAT_0000063
T10 1384-1391 Body_part denotes antenna http://purl.obolibrary.org/obo/MAT_0000086
T11 1550-1557 Body_part denotes antenna http://purl.obolibrary.org/obo/MAT_0000086
T12 1625-1632 Body_part denotes antenna http://purl.obolibrary.org/obo/MAT_0000086
T13 1772-1779 Body_part denotes antenna http://purl.obolibrary.org/obo/MAT_0000086
T14 1858-1868 Body_part denotes vertebrate http://purl.obolibrary.org/obo/MAT_0000373

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-75 Sentence denotes Structures and developmental alterations of N-glycans of zebrafish embryos.
TextSentencer_T2 76-151 Sentence denotes Zebrafish is a model organism suitable for studying vertebrate development.
TextSentencer_T3 152-325 Sentence denotes We analyzed the N-glycan structures of zebrafish embryos and their alterations during zebrafish embryogenesis to obtain basic data for studying the roles of N-glycosylation.
TextSentencer_T4 326-463 Sentence denotes Multiple modes of high-performance liquid chromatography and multistage mass spectrometry were used for structural analysis of N-glycans.
TextSentencer_T5 464-798 Sentence denotes The N-glycans from deyolked embryos at 36 hours postfertilization, a mid-pharyngula stage, contained relatively higher amounts of complex- and hybrid-type glycans with LacNAc (Galβ1-4GlcNAc) and/or sialyl LacNAc without additional β1,4-Gal, which are commonly found in mammalian tissues, as well as abundant oligomannose-type glycans.
TextSentencer_T6 799-973 Sentence denotes Some of the complex- and hybrid-type glycans possessed various extended LacNAc structures, such as Galβ1-4LacNAc, LacNAc-repeat or unique (+/- dHex)-GalNAcα1-GlcNAcβ1-LacNAc.
TextSentencer_T7 974-1135 Sentence denotes In contrast, the yolk of the embryo contains predominant oligomannose-type glycans and complex-type glycans with Galβ1-4(Siaα2-3)Galβ1-4(Fucα1-3)GlcNAc antennae.
TextSentencer_T8 1136-1274 Sentence denotes N-Glycan profiles obtained from deyolked embryos at different stages showed stage-dependent variation of complex- and hybrid-type glycans.
TextSentencer_T9 1275-1457 Sentence denotes At gastrula and early segmentation stages, complex- and hybrid-type glycans were minor components, and their antenna structures were mainly sialyl LacdiNAc (Siaα2-6GalNAcβ1-4GlcNAc).
TextSentencer_T10 1458-1703 Sentence denotes From the mid-segmentation to pharyngula stages, those with LacNAc and/or α2,6-sialyl LacNAc antenna structures increased remarkably, and those with α2,3-sialyl LacNAc antenna, core α1,6-Fuc and bisecting GlcNAc modifications increased gradually.
TextSentencer_T11 1704-1881 Sentence denotes These results suggest the presence of mechanisms for regulating the antenna structures of complex/hybrid N-glycan biosynthesis in the phylotypic stage of vertebrate development.
T1 0-75 Sentence denotes Structures and developmental alterations of N-glycans of zebrafish embryos.
T2 76-151 Sentence denotes Zebrafish is a model organism suitable for studying vertebrate development.
T3 152-325 Sentence denotes We analyzed the N-glycan structures of zebrafish embryos and their alterations during zebrafish embryogenesis to obtain basic data for studying the roles of N-glycosylation.
T4 326-463 Sentence denotes Multiple modes of high-performance liquid chromatography and multistage mass spectrometry were used for structural analysis of N-glycans.
T5 464-798 Sentence denotes The N-glycans from deyolked embryos at 36 hours postfertilization, a mid-pharyngula stage, contained relatively higher amounts of complex- and hybrid-type glycans with LacNAc (Galβ1-4GlcNAc) and/or sialyl LacNAc without additional β1,4-Gal, which are commonly found in mammalian tissues, as well as abundant oligomannose-type glycans.
T6 799-973 Sentence denotes Some of the complex- and hybrid-type glycans possessed various extended LacNAc structures, such as Galβ1-4LacNAc, LacNAc-repeat or unique (+/- dHex)-GalNAcα1-GlcNAcβ1-LacNAc.
T7 974-1135 Sentence denotes In contrast, the yolk of the embryo contains predominant oligomannose-type glycans and complex-type glycans with Galβ1-4(Siaα2-3)Galβ1-4(Fucα1-3)GlcNAc antennae.
T8 1136-1274 Sentence denotes N-Glycan profiles obtained from deyolked embryos at different stages showed stage-dependent variation of complex- and hybrid-type glycans.
T9 1275-1457 Sentence denotes At gastrula and early segmentation stages, complex- and hybrid-type glycans were minor components, and their antenna structures were mainly sialyl LacdiNAc (Siaα2-6GalNAcβ1-4GlcNAc).
T10 1458-1703 Sentence denotes From the mid-segmentation to pharyngula stages, those with LacNAc and/or α2,6-sialyl LacNAc antenna structures increased remarkably, and those with α2,3-sialyl LacNAc antenna, core α1,6-Fuc and bisecting GlcNAc modifications increased gradually.
T11 1704-1881 Sentence denotes These results suggest the presence of mechanisms for regulating the antenna structures of complex/hybrid N-glycan biosynthesis in the phylotypic stage of vertebrate development.

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-75 Sentence denotes Structures and developmental alterations of N-glycans of zebrafish embryos.
T2 76-151 Sentence denotes Zebrafish is a model organism suitable for studying vertebrate development.
T3 152-325 Sentence denotes We analyzed the N-glycan structures of zebrafish embryos and their alterations during zebrafish embryogenesis to obtain basic data for studying the roles of N-glycosylation.
T4 326-463 Sentence denotes Multiple modes of high-performance liquid chromatography and multistage mass spectrometry were used for structural analysis of N-glycans.
T5 464-798 Sentence denotes The N-glycans from deyolked embryos at 36 hours postfertilization, a mid-pharyngula stage, contained relatively higher amounts of complex- and hybrid-type glycans with LacNAc (Galβ1-4GlcNAc) and/or sialyl LacNAc without additional β1,4-Gal, which are commonly found in mammalian tissues, as well as abundant oligomannose-type glycans.
T6 799-973 Sentence denotes Some of the complex- and hybrid-type glycans possessed various extended LacNAc structures, such as Galβ1-4LacNAc, LacNAc-repeat or unique (+/- dHex)-GalNAcα1-GlcNAcβ1-LacNAc.
T7 974-1135 Sentence denotes In contrast, the yolk of the embryo contains predominant oligomannose-type glycans and complex-type glycans with Galβ1-4(Siaα2-3)Galβ1-4(Fucα1-3)GlcNAc antennae.
T8 1136-1274 Sentence denotes N-Glycan profiles obtained from deyolked embryos at different stages showed stage-dependent variation of complex- and hybrid-type glycans.
T9 1275-1457 Sentence denotes At gastrula and early segmentation stages, complex- and hybrid-type glycans were minor components, and their antenna structures were mainly sialyl LacdiNAc (Siaα2-6GalNAcβ1-4GlcNAc).
T10 1458-1703 Sentence denotes From the mid-segmentation to pharyngula stages, those with LacNAc and/or α2,6-sialyl LacNAc antenna structures increased remarkably, and those with α2,3-sialyl LacNAc antenna, core α1,6-Fuc and bisecting GlcNAc modifications increased gradually.
T11 1704-1881 Sentence denotes These results suggest the presence of mechanisms for regulating the antenna structures of complex/hybrid N-glycan biosynthesis in the phylotypic stage of vertebrate development.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 632-638 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T2 669-675 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T3 871-877 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T4 905-911 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T5 913-919 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T6 948-954 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T7 966-972 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T8 1439-1445 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T9 1517-1523 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T10 1543-1549 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR
T11 1618-1624 Glycan denotes LacNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G66213AR

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 57-66 OrganismTaxon denotes zebrafish 7955
T2 76-85 OrganismTaxon denotes Zebrafish 7955
T3 191-200 OrganismTaxon denotes zebrafish 7955
T4 238-247 OrganismTaxon denotes zebrafish 7955

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 97-105 Body_part denotes organism http://purl.obolibrary.org/obo/UBERON_0000468
T2 991-995 Body_part denotes yolk http://purl.obolibrary.org/obo/UBERON_0007378|http://purl.obolibrary.org/obo/UBERON_2000084
T4 1003-1009 Body_part denotes embryo http://purl.obolibrary.org/obo/UBERON_0000922
T5 1278-1286 Body_part denotes gastrula http://purl.obolibrary.org/obo/UBERON_0004734
T6 1384-1391 Body_part denotes antenna http://purl.obolibrary.org/obo/UBERON_0000972
T7 1550-1557 Body_part denotes antenna http://purl.obolibrary.org/obo/UBERON_0000972
T8 1625-1632 Body_part denotes antenna http://purl.obolibrary.org/obo/UBERON_0000972
T9 1772-1779 Body_part denotes antenna http://purl.obolibrary.org/obo/UBERON_0000972