PubMed:26684240 / 643-865
Annnotations
LitCoin-entities
{"project":"LitCoin-entities","denotations":[{"id":"10980","span":{"begin":9,"end":17},"obj":"DiseaseOrPhenotypicFeature"},{"id":"10981","span":{"begin":59,"end":65},"obj":"DiseaseOrPhenotypicFeature"},{"id":"10982","span":{"begin":90,"end":94},"obj":"GeneOrGeneProduct"},{"id":"10983","span":{"begin":96,"end":101},"obj":"GeneOrGeneProduct"},{"id":"10984","span":{"begin":103,"end":106},"obj":"GeneOrGeneProduct"},{"id":"10985","span":{"begin":108,"end":111},"obj":"GeneOrGeneProduct"},{"id":"10986","span":{"begin":113,"end":117},"obj":"GeneOrGeneProduct"},{"id":"10987","span":{"begin":119,"end":123},"obj":"GeneOrGeneProduct"},{"id":"10988","span":{"begin":125,"end":131},"obj":"GeneOrGeneProduct"},{"id":"10989","span":{"begin":133,"end":137},"obj":"GeneOrGeneProduct"},{"id":"10990","span":{"begin":139,"end":144},"obj":"GeneOrGeneProduct"},{"id":"10991","span":{"begin":146,"end":151},"obj":"GeneOrGeneProduct"},{"id":"10992","span":{"begin":153,"end":158},"obj":"GeneOrGeneProduct"},{"id":"10993","span":{"begin":160,"end":164},"obj":"GeneOrGeneProduct"},{"id":"10994","span":{"begin":166,"end":169},"obj":"GeneOrGeneProduct"},{"id":"10995","span":{"begin":171,"end":175},"obj":"GeneOrGeneProduct"},{"id":"10996","span":{"begin":177,"end":181},"obj":"GeneOrGeneProduct"},{"id":"10997","span":{"begin":183,"end":188},"obj":"GeneOrGeneProduct"},{"id":"10998","span":{"begin":190,"end":197},"obj":"GeneOrGeneProduct"},{"id":"10999","span":{"begin":199,"end":203},"obj":"GeneOrGeneProduct"},{"id":"11000","span":{"begin":205,"end":212},"obj":"GeneOrGeneProduct"},{"id":"11001","span":{"begin":218,"end":221},"obj":"GeneOrGeneProduct"}],"attributes":[{"id":"A24","pred":"db_id","subj":"10994","obj":"NCBIGene:23269"},{"id":"A21","pred":"db_id","subj":"10991","obj":"NCBIGene:2065"},{"id":"A10","pred":"db_id","subj":"10980","obj":"MESH:C535650"},{"id":"A22","pred":"db_id","subj":"10992","obj":"NCBIGene:7403"},{"id":"A26","pred":"db_id","subj":"10996","obj":"NCBIGene:5728"},{"id":"A27","pred":"db_id","subj":"10997","obj":"NCBIGene:5921"},{"id":"A20","pred":"db_id","subj":"10990","obj":"NCBIGene:2033"},{"id":"A17","pred":"db_id","subj":"10987","obj":"NCBIGene:673"},{"id":"A11","pred":"db_id","subj":"10981","obj":"MESH:D009369"},{"id":"A13","pred":"db_id","subj":"10983","obj":"NCBIGene:168975"},{"id":"A29","pred":"db_id","subj":"10999","obj":"NCBIGene:23013"},{"id":"A16","pred":"db_id","subj":"10986","obj":"NCBIGene:54880"},{"id":"A14","pred":"db_id","subj":"10984","obj":"NCBIGene:5925"},{"id":"A28","pred":"db_id","subj":"10998","obj":"NCBIGene:6598"},{"id":"A12","pred":"db_id","subj":"10982","obj":"NCBIGene:7157"},{"id":"A18","pred":"db_id","subj":"10988","obj":"NCBIGene:1499"},{"id":"A30","pred":"db_id","subj":"11000","obj":"NCBIGene:23232"},{"id":"A25","pred":"db_id","subj":"10995","obj":"NCBIGene:58508"},{"id":"A15","pred":"db_id","subj":"10985","obj":"NCBIGene:324"},{"id":"A23","pred":"db_id","subj":"10993","obj":"NCBIGene:3845"},{"id":"A31","pred":"db_id","subj":"11001","obj":"NCBIGene:7428"},{"id":"A19","pred":"db_id","subj":"10989","obj":"NCBIGene:1956"}],"namespaces":[{"prefix":"_base","uri":"https://w3id.org/biolink/vocab/"},{"prefix":"MESH","uri":"http://id.nlm.nih.gov/mesh/"},{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id="},{"prefix":"NCBIGene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"OMIM","uri":"https://www.omim.org/entry/"},{"prefix":"DBSNP","uri":"https://www.ncbi.nlm.nih.gov/snp/"}],"text":"Among 12 GEP-NETs, eight showed mutations of more than one cancer-related gene, including TP53, CNBD1, RB1, APC, BCOR, BRAF, CTNNB1, EGFR, EP300, ERBB3, KDM6A, KRAS, MGA, MLL3, PTEN, RASA1, SMARCB1, SPEN, TBC1D12, and VHL."}
LitCoin-sentences
{"project":"LitCoin-sentences","denotations":[{"id":"T5","span":{"begin":0,"end":222},"obj":"Sentence"}],"text":"Among 12 GEP-NETs, eight showed mutations of more than one cancer-related gene, including TP53, CNBD1, RB1, APC, BCOR, BRAF, CTNNB1, EGFR, EP300, ERBB3, KDM6A, KRAS, MGA, MLL3, PTEN, RASA1, SMARCB1, SPEN, TBC1D12, and VHL."}
LitCoin_Mondo
{"project":"LitCoin_Mondo","denotations":[{"id":"T1","span":{"begin":59,"end":65},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"0004992"}],"text":"Among 12 GEP-NETs, eight showed mutations of more than one cancer-related gene, including TP53, CNBD1, RB1, APC, BCOR, BRAF, CTNNB1, EGFR, EP300, ERBB3, KDM6A, KRAS, MGA, MLL3, PTEN, RASA1, SMARCB1, SPEN, TBC1D12, and VHL."}
LitCoin-GeneOrGeneProduct-v2
{"project":"LitCoin-GeneOrGeneProduct-v2","denotations":[{"id":"T3","span":{"begin":90,"end":94},"obj":"GeneOrGeneProduct"},{"id":"T4","span":{"begin":96,"end":101},"obj":"GeneOrGeneProduct"},{"id":"T5","span":{"begin":103,"end":106},"obj":"GeneOrGeneProduct"},{"id":"T6","span":{"begin":113,"end":117},"obj":"GeneOrGeneProduct"},{"id":"T7","span":{"begin":119,"end":123},"obj":"GeneOrGeneProduct"},{"id":"T8","span":{"begin":125,"end":131},"obj":"GeneOrGeneProduct"},{"id":"T9","span":{"begin":133,"end":137},"obj":"GeneOrGeneProduct"},{"id":"T10","span":{"begin":139,"end":144},"obj":"GeneOrGeneProduct"},{"id":"T11","span":{"begin":146,"end":151},"obj":"GeneOrGeneProduct"},{"id":"T12","span":{"begin":153,"end":158},"obj":"GeneOrGeneProduct"},{"id":"T13","span":{"begin":160,"end":164},"obj":"GeneOrGeneProduct"},{"id":"T14","span":{"begin":171,"end":175},"obj":"GeneOrGeneProduct"},{"id":"T15","span":{"begin":177,"end":181},"obj":"GeneOrGeneProduct"},{"id":"T16","span":{"begin":183,"end":188},"obj":"GeneOrGeneProduct"},{"id":"T17","span":{"begin":190,"end":197},"obj":"GeneOrGeneProduct"},{"id":"T18","span":{"begin":199,"end":203},"obj":"GeneOrGeneProduct"},{"id":"T19","span":{"begin":205,"end":212},"obj":"GeneOrGeneProduct"}],"text":"Among 12 GEP-NETs, eight showed mutations of more than one cancer-related gene, including TP53, CNBD1, RB1, APC, BCOR, BRAF, CTNNB1, EGFR, EP300, ERBB3, KDM6A, KRAS, MGA, MLL3, PTEN, RASA1, SMARCB1, SPEN, TBC1D12, and VHL."}
LitCoin-GeneOrGeneProduct-v0
{"project":"LitCoin-GeneOrGeneProduct-v0","denotations":[{"id":"T19","span":{"begin":13,"end":17},"obj":"GeneOrGeneProduct"},{"id":"T20","span":{"begin":32,"end":41},"obj":"GeneOrGeneProduct"},{"id":"T21","span":{"begin":90,"end":94},"obj":"GeneOrGeneProduct"},{"id":"T22","span":{"begin":96,"end":101},"obj":"GeneOrGeneProduct"},{"id":"T23","span":{"begin":103,"end":106},"obj":"GeneOrGeneProduct"},{"id":"T24","span":{"begin":108,"end":111},"obj":"GeneOrGeneProduct"},{"id":"T25","span":{"begin":113,"end":117},"obj":"GeneOrGeneProduct"},{"id":"T26","span":{"begin":119,"end":123},"obj":"GeneOrGeneProduct"},{"id":"T27","span":{"begin":125,"end":131},"obj":"GeneOrGeneProduct"},{"id":"T28","span":{"begin":133,"end":137},"obj":"GeneOrGeneProduct"},{"id":"T29","span":{"begin":139,"end":144},"obj":"GeneOrGeneProduct"},{"id":"T30","span":{"begin":146,"end":151},"obj":"GeneOrGeneProduct"},{"id":"T31","span":{"begin":153,"end":158},"obj":"GeneOrGeneProduct"},{"id":"T32","span":{"begin":160,"end":164},"obj":"GeneOrGeneProduct"},{"id":"T33","span":{"begin":171,"end":175},"obj":"GeneOrGeneProduct"},{"id":"T34","span":{"begin":177,"end":181},"obj":"GeneOrGeneProduct"},{"id":"T35","span":{"begin":183,"end":188},"obj":"GeneOrGeneProduct"},{"id":"T36","span":{"begin":190,"end":197},"obj":"GeneOrGeneProduct"},{"id":"T37","span":{"begin":199,"end":203},"obj":"GeneOrGeneProduct"},{"id":"T38","span":{"begin":205,"end":212},"obj":"GeneOrGeneProduct"}],"text":"Among 12 GEP-NETs, eight showed mutations of more than one cancer-related gene, including TP53, CNBD1, RB1, APC, BCOR, BRAF, CTNNB1, EGFR, EP300, ERBB3, KDM6A, KRAS, MGA, MLL3, PTEN, RASA1, SMARCB1, SPEN, TBC1D12, and VHL."}
LitCoin-Disease-MeSH
{"project":"LitCoin-Disease-MeSH","denotations":[{"id":"T3","span":{"begin":59,"end":65},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A3","pred":"originalLabel","subj":"T3","obj":"D009369"}],"text":"Among 12 GEP-NETs, eight showed mutations of more than one cancer-related gene, including TP53, CNBD1, RB1, APC, BCOR, BRAF, CTNNB1, EGFR, EP300, ERBB3, KDM6A, KRAS, MGA, MLL3, PTEN, RASA1, SMARCB1, SPEN, TBC1D12, and VHL."}
LitCoin-GeneOrGeneProduct-v3
{"project":"LitCoin-GeneOrGeneProduct-v3","denotations":[{"id":"T2","span":{"begin":90,"end":94},"obj":"GeneOrGeneProduct"},{"id":"T3","span":{"begin":96,"end":101},"obj":"GeneOrGeneProduct"},{"id":"T4","span":{"begin":103,"end":106},"obj":"GeneOrGeneProduct"},{"id":"T5","span":{"begin":113,"end":117},"obj":"GeneOrGeneProduct"},{"id":"T6","span":{"begin":119,"end":123},"obj":"GeneOrGeneProduct"},{"id":"T7","span":{"begin":125,"end":131},"obj":"GeneOrGeneProduct"},{"id":"T8","span":{"begin":133,"end":137},"obj":"GeneOrGeneProduct"},{"id":"T9","span":{"begin":139,"end":144},"obj":"GeneOrGeneProduct"},{"id":"T10","span":{"begin":146,"end":151},"obj":"GeneOrGeneProduct"},{"id":"T11","span":{"begin":153,"end":158},"obj":"GeneOrGeneProduct"},{"id":"T12","span":{"begin":160,"end":164},"obj":"GeneOrGeneProduct"},{"id":"T13","span":{"begin":171,"end":175},"obj":"GeneOrGeneProduct"},{"id":"T14","span":{"begin":177,"end":181},"obj":"GeneOrGeneProduct"},{"id":"T15","span":{"begin":183,"end":188},"obj":"GeneOrGeneProduct"},{"id":"T16","span":{"begin":190,"end":197},"obj":"GeneOrGeneProduct"},{"id":"T17","span":{"begin":199,"end":203},"obj":"GeneOrGeneProduct"},{"id":"T18","span":{"begin":205,"end":212},"obj":"GeneOrGeneProduct"}],"text":"Among 12 GEP-NETs, eight showed mutations of more than one cancer-related gene, including TP53, CNBD1, RB1, APC, BCOR, BRAF, CTNNB1, EGFR, EP300, ERBB3, KDM6A, KRAS, MGA, MLL3, PTEN, RASA1, SMARCB1, SPEN, TBC1D12, and VHL."}
LitCoin_Mondo_095
{"project":"LitCoin_Mondo_095","denotations":[{"id":"T5","span":{"begin":103,"end":106},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T6","span":{"begin":218,"end":221},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A5","pred":"mondo_id","subj":"T5","obj":"0018160"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"0008667"}],"text":"Among 12 GEP-NETs, eight showed mutations of more than one cancer-related gene, including TP53, CNBD1, RB1, APC, BCOR, BRAF, CTNNB1, EGFR, EP300, ERBB3, KDM6A, KRAS, MGA, MLL3, PTEN, RASA1, SMARCB1, SPEN, TBC1D12, and VHL."}
LitCoin-MeSH-Disease-2
{"project":"LitCoin-MeSH-Disease-2","denotations":[{"id":"T6","span":{"begin":9,"end":17},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T7","span":{"begin":59,"end":65},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A6","pred":"ID:","subj":"T6","obj":"DISEASE"},{"id":"A7","pred":"ID:","subj":"T7","obj":"D009369"}],"text":"Among 12 GEP-NETs, eight showed mutations of more than one cancer-related gene, including TP53, CNBD1, RB1, APC, BCOR, BRAF, CTNNB1, EGFR, EP300, ERBB3, KDM6A, KRAS, MGA, MLL3, PTEN, RASA1, SMARCB1, SPEN, TBC1D12, and VHL."}
LitCoin-MONDO_bioort2019
{"project":"LitCoin-MONDO_bioort2019","denotations":[{"id":"T6","span":{"begin":9,"end":17},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T7","span":{"begin":59,"end":65},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A6","pred":"#label","subj":"T6","obj":"DISEASE"},{"id":"A7","pred":"#label","subj":"T7","obj":"D009369"}],"text":"Among 12 GEP-NETs, eight showed mutations of more than one cancer-related gene, including TP53, CNBD1, RB1, APC, BCOR, BRAF, CTNNB1, EGFR, EP300, ERBB3, KDM6A, KRAS, MGA, MLL3, PTEN, RASA1, SMARCB1, SPEN, TBC1D12, and VHL."}
LitCoin-training-merged
{"project":"LitCoin-training-merged","denotations":[{"id":"T18","span":{"begin":205,"end":212},"obj":"GeneOrGeneProduct"},{"id":"T17","span":{"begin":199,"end":203},"obj":"GeneOrGeneProduct"},{"id":"T16","span":{"begin":190,"end":197},"obj":"GeneOrGeneProduct"},{"id":"T15","span":{"begin":183,"end":188},"obj":"GeneOrGeneProduct"},{"id":"T14","span":{"begin":177,"end":181},"obj":"GeneOrGeneProduct"},{"id":"T13","span":{"begin":171,"end":175},"obj":"GeneOrGeneProduct"},{"id":"T12","span":{"begin":160,"end":164},"obj":"GeneOrGeneProduct"},{"id":"T11","span":{"begin":153,"end":158},"obj":"GeneOrGeneProduct"},{"id":"T10","span":{"begin":146,"end":151},"obj":"GeneOrGeneProduct"},{"id":"T9","span":{"begin":139,"end":144},"obj":"GeneOrGeneProduct"},{"id":"T8","span":{"begin":133,"end":137},"obj":"GeneOrGeneProduct"},{"id":"T7","span":{"begin":125,"end":131},"obj":"GeneOrGeneProduct"},{"id":"T6","span":{"begin":119,"end":123},"obj":"GeneOrGeneProduct"},{"id":"T42858","span":{"begin":113,"end":117},"obj":"GeneOrGeneProduct"},{"id":"T4","span":{"begin":103,"end":106},"obj":"GeneOrGeneProduct"},{"id":"T59666","span":{"begin":96,"end":101},"obj":"GeneOrGeneProduct"},{"id":"T2","span":{"begin":90,"end":94},"obj":"GeneOrGeneProduct"},{"id":"T84367","span":{"begin":59,"end":65},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T64672","span":{"begin":9,"end":17},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A7","pred":"#label","subj":"T84367","obj":"D009369"},{"id":"A27552","pred":"#label","subj":"T64672","obj":"DISEASE"}],"text":"Among 12 GEP-NETs, eight showed mutations of more than one cancer-related gene, including TP53, CNBD1, RB1, APC, BCOR, BRAF, CTNNB1, EGFR, EP300, ERBB3, KDM6A, KRAS, MGA, MLL3, PTEN, RASA1, SMARCB1, SPEN, TBC1D12, and VHL."}